Protein–RNA interactions for Protein: A0A075B6X5

TRAV18, T-cell receptor alpha variable 18 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV18A0A075B6X5 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TRAV18A0A075B6X5 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
TRAV18A0A075B6X5 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TRAV18A0A075B6X5 AC005559.1-201ENST00000589661 871 ntBASIC20.97■□□□□ 0.95
TRAV18A0A075B6X5 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
TRAV18A0A075B6X5 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
TRAV18A0A075B6X5 THRA-202ENST00000394121 2260 ntTSL 2 BASIC20.97■□□□□ 0.95
TRAV18A0A075B6X5 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TRAV18A0A075B6X5 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TRAV18A0A075B6X5 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC20.95■□□□□ 0.94
TRAV18A0A075B6X5 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC20.95■□□□□ 0.94
TRAV18A0A075B6X5 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
TRAV18A0A075B6X5 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
TRAV18A0A075B6X5 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
TRAV18A0A075B6X5 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
TRAV18A0A075B6X5 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
TRAV18A0A075B6X5 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TRAV18A0A075B6X5 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TRAV18A0A075B6X5 WHAMMP3-201ENST00000611636 1609 ntBASIC20.93■□□□□ 0.94
TRAV18A0A075B6X5 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
TRAV18A0A075B6X5 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TRAV18A0A075B6X5 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TRAV18A0A075B6X5 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TRAV18A0A075B6X5 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TRAV18A0A075B6X5 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TRAV18A0A075B6X5 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
TRAV18A0A075B6X5 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TRAV18A0A075B6X5 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
TRAV18A0A075B6X5 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
TRAV18A0A075B6X5 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
TRAV18A0A075B6X5 LTK-203ENST00000453182 2412 ntTSL 2 BASIC20.91■□□□□ 0.94
TRAV18A0A075B6X5 AC142381.3-201ENST00000568208 1670 ntBASIC20.91■□□□□ 0.94
TRAV18A0A075B6X5 AC010501.1-201ENST00000606270 1962 ntBASIC20.91■□□□□ 0.94
TRAV18A0A075B6X5 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC20.9■□□□□ 0.94
TRAV18A0A075B6X5 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC20.9■□□□□ 0.94
TRAV18A0A075B6X5 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
TRAV18A0A075B6X5 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
TRAV18A0A075B6X5 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
TRAV18A0A075B6X5 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC20.89■□□□□ 0.94
TRAV18A0A075B6X5 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC20.89■□□□□ 0.93
TRAV18A0A075B6X5 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
TRAV18A0A075B6X5 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
TRAV18A0A075B6X5 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC20.88■□□□□ 0.93
TRAV18A0A075B6X5 MED17-227ENST00000640521 2047 ntTSL 5 BASIC20.88■□□□□ 0.93
TRAV18A0A075B6X5 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
TRAV18A0A075B6X5 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
TRAV18A0A075B6X5 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
TRAV18A0A075B6X5 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
TRAV18A0A075B6X5 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TRAV18A0A075B6X5 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC20.88■□□□□ 0.93
TRAV18A0A075B6X5 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC20.88■□□□□ 0.93
TRAV18A0A075B6X5 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TRAV18A0A075B6X5 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TRAV18A0A075B6X5 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
TRAV18A0A075B6X5 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TRAV18A0A075B6X5 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC20.88■□□□□ 0.93
TRAV18A0A075B6X5 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC20.88■□□□□ 0.93
TRAV18A0A075B6X5 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
TRAV18A0A075B6X5 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TRAV18A0A075B6X5 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TRAV18A0A075B6X5 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
TRAV18A0A075B6X5 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC20.87■□□□□ 0.93
TRAV18A0A075B6X5 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
TRAV18A0A075B6X5 CALM3-209ENST00000597743 577 ntTSL 4 BASIC20.87■□□□□ 0.93
TRAV18A0A075B6X5 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
TRAV18A0A075B6X5 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TRAV18A0A075B6X5 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
TRAV18A0A075B6X5 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
TRAV18A0A075B6X5 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
TRAV18A0A075B6X5 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TRAV18A0A075B6X5 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
TRAV18A0A075B6X5 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC20.86■□□□□ 0.93
TRAV18A0A075B6X5 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC20.86■□□□□ 0.93
TRAV18A0A075B6X5 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TRAV18A0A075B6X5 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
TRAV18A0A075B6X5 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
TRAV18A0A075B6X5 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TRAV18A0A075B6X5 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
TRAV18A0A075B6X5 AC110285.7-201ENST00000624417 1536 ntBASIC20.85■□□□□ 0.93
TRAV18A0A075B6X5 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TRAV18A0A075B6X5 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC20.85■□□□□ 0.93
TRAV18A0A075B6X5 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TRAV18A0A075B6X5 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
TRAV18A0A075B6X5 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC20.84■□□□□ 0.93
TRAV18A0A075B6X5 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
TRAV18A0A075B6X5 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
TRAV18A0A075B6X5 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
TRAV18A0A075B6X5 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
TRAV18A0A075B6X5 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC20.84■□□□□ 0.93
TRAV18A0A075B6X5 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
TRAV18A0A075B6X5 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
TRAV18A0A075B6X5 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
TRAV18A0A075B6X5 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
TRAV18A0A075B6X5 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC20.83■□□□□ 0.93
TRAV18A0A075B6X5 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC20.83■□□□□ 0.92
TRAV18A0A075B6X5 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC20.83■□□□□ 0.92
TRAV18A0A075B6X5 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC20.83■□□□□ 0.92
TRAV18A0A075B6X5 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
TRAV18A0A075B6X5 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC20.82■□□□□ 0.92
TRAV18A0A075B6X5 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms