Protein–RNA interactions for Protein: Q07955

SRSF1, Serine/arginine-rich splicing factor 1, humanhuman

Known RBP eCLIP

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1Q07955 PSPH-210ENST00000437355 1409 ntTSL 511.86□□□□□ -0.511e-7■□□□□ 9.3
SRSF1Q07955 CBLB-204ENST00000405772 3237 ntTSL 2 BASIC10.6□□□□□ -0.711e-7■□□□□ 9.3
SRSF1Q07955 PSPH-211ENST00000459834 692 ntTSL 310.51□□□□□ -0.731e-7■□□□□ 9.3
SRSF1Q07955 IP6K1-201ENST00000321599 4456 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.731e-7■□□□□ 9.3
SRSF1Q07955 IP6K1-202ENST00000395238 4117 ntTSL 3 BASIC10.18□□□□□ -0.781e-7■□□□□ 9.3
SRSF1Q07955 CBLB-201ENST00000264122 6780 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.91e-7■□□□□ 9.3
SRSF1Q07955 CBLB-203ENST00000403724 3350 ntTSL 2 BASIC9.04□□□□□ -0.961e-7■□□□□ 9.3
SRSF1Q07955 CBLB-206ENST00000438603 519 ntTSL 47.39□□□□□ -1.231e-7■□□□□ 9.3
SRSF1Q07955 CBLB-207ENST00000443752 561 ntTSL 37.34□□□□□ -1.231e-7■□□□□ 9.3
SRSF1Q07955 GABRE-204ENST00000462018 650 ntTSL 39.2□□□□□ -0.945e-8■□□□□ 9.3
SRSF1Q07955 STIP1-208ENST00000540501 880 ntTSL 322.46■■□□□ 1.194e-7■□□□□ 9.3
SRSF1Q07955 RABGGTA-210ENST00000559586 889 ntTSL 519.42■□□□□ 0.74e-7■□□□□ 9.3
SRSF1Q07955 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.394e-7■□□□□ 9.3
SRSF1Q07955 RABGGTA-203ENST00000543002 1329 ntTSL 215.4■□□□□ 0.064e-7■□□□□ 9.3
SRSF1Q07955 RABGGTA-205ENST00000558534 753 ntTSL 314.39□□□□□ -0.114e-7■□□□□ 9.3
SRSF1Q07955 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.214e-7■□□□□ 9.3
SRSF1Q07955 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.424e-7■□□□□ 9.3
SRSF1Q07955 STIP1-204ENST00000536973 738 ntTSL 512.22□□□□□ -0.454e-7■□□□□ 9.3
SRSF1Q07955 RABGGTA-209ENST00000559551 2060 ntTSL 512.08□□□□□ -0.484e-7■□□□□ 9.3
SRSF1Q07955 RABGGTA-212ENST00000559974 1963 ntTSL 511.9□□□□□ -0.54e-7■□□□□ 9.3
SRSF1Q07955 RABGGTA-207ENST00000558936 648 ntTSL 211.88□□□□□ -0.514e-7■□□□□ 9.3
SRSF1Q07955 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC11.77□□□□□ -0.534e-7■□□□□ 9.3
SRSF1Q07955 RABGGTA-204ENST00000558376 1883 ntTSL 511.17□□□□□ -0.624e-7■□□□□ 9.3
SRSF1Q07955 RABGGTA-220ENST00000560998 1997 ntTSL 511.05□□□□□ -0.644e-7■□□□□ 9.3
SRSF1Q07955 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC10.89□□□□□ -0.674e-7■□□□□ 9.3
SRSF1Q07955 RABGGTA-218ENST00000560777 1197 ntTSL 5 BASIC10.85□□□□□ -0.674e-7■□□□□ 9.3
SRSF1Q07955 STIP1-211ENST00000543847 772 ntTSL 1 (best) BASIC8.72□□□□□ -1.014e-7■□□□□ 9.3
SRSF1Q07955 STIP1-209ENST00000540736 399 ntTSL 25.44□□□□□ -1.544e-7■□□□□ 9.3
SRSF1Q07955 NEAT1-203ENST00000601801 487 ntTSL 4 BASIC14.22□□□□□ -0.132e-45■□□□□ 9.3
SRSF1Q07955 NEAT1_1.1-201ENST00000620348 120 ntBASIC10.95□□□□□ -0.662e-45■□□□□ 9.3
SRSF1Q07955 MED13L-207ENST00000551197 489 ntTSL 54.58□□□□□ -1.688e-7■□□□□ 9.3
SRSF1Q07955 CCNY-209ENST00000493157 816 ntTSL 516.3■□□□□ 0.27e-9■□□□□ 9.3
SRSF1Q07955 CCNY-207ENST00000490012 793 ntTSL 315.89■□□□□ 0.137e-9■□□□□ 9.3
SRSF1Q07955 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC12.84□□□□□ -0.357e-9■□□□□ 9.3
SRSF1Q07955 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC11.97□□□□□ -0.497e-9■□□□□ 9.3
SRSF1Q07955 CCNY-203ENST00000374704 3960 ntAPPRIS P4 TSL 1 (best) BASIC10.36□□□□□ -0.757e-9■□□□□ 9.3
SRSF1Q07955 LSS-203ENST00000419093 517 ntTSL 39.25□□□□□ -0.935e-9■□□□□ 9.3
SRSF1Q07955 CCNY-204ENST00000374706 3940 ntAPPRIS ALT1 TSL 1 (best) BASIC8.05□□□□□ -1.127e-9■□□□□ 9.3
SRSF1Q07955 CCNY-208ENST00000492478 809 ntTSL 57.8□□□□□ -1.167e-9■□□□□ 9.3
SRSF1Q07955 EXOC3L4-203ENST00000559661 665 ntTSL 516.93■□□□□ 0.31e-6■□□□□ 9.3
SRSF1Q07955 ISYNA1-213ENST00000583534 629 ntTSL 1 (best)19.28■□□□□ 0.682e-8■□□□□ 9.3
SRSF1Q07955 ISYNA1-205ENST00000578352 592 ntTSL 218.33■□□□□ 0.522e-8■□□□□ 9.3
SRSF1Q07955 ISYNA1-208ENST00000581800 627 ntTSL 415.42■□□□□ 0.062e-8■□□□□ 9.3
SRSF1Q07955 HNRNPU-211ENST00000489705 451 ntTSL 35.94□□□□□ -1.462e-8■□□□□ 9.3
SRSF1Q07955 HNRNPU-230ENST00000640657 4323 ntTSL 54.11□□□□□ -1.752e-8■□□□□ 9.3
SRSF1Q07955 HNRNPU-203ENST00000366527 12852 ntTSL 23.43□□□□□ -1.862e-8■□□□□ 9.3
SRSF1Q07955 GOLGA2-203ENST00000458730 704 ntTSL 515.54■□□□□ 0.083e-8■□□□□ 9.2
SRSF1Q07955 FAM50A-204ENST00000478509 682 ntTSL 314.28□□□□□ -0.125e-9■□□□□ 9.2
SRSF1Q07955 FAM50A-205ENST00000481619 763 ntTSL 211.74□□□□□ -0.535e-9■□□□□ 9.2
SRSF1Q07955 AC011476.3-202ENST00000586845 553 ntTSL 3 BASIC5.61□□□□□ -1.515e-9■□□□□ 9.2
SRSF1Q07955 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC19.76■□□□□ 0.753e-7■□□□□ 9.2
SRSF1Q07955 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC19.03■□□□□ 0.643e-7■□□□□ 9.2
SRSF1Q07955 WASHC2C-205ENST00000420848 868 ntAPPRIS ALT2 TSL 515.46■□□□□ 0.073e-7■□□□□ 9.2
SRSF1Q07955 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.273e-7■□□□□ 9.2
SRSF1Q07955 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.273e-7■□□□□ 9.2
SRSF1Q07955 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.33e-7■□□□□ 9.2
SRSF1Q07955 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC13.09□□□□□ -0.313e-7■□□□□ 9.2
SRSF1Q07955 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.333e-7■□□□□ 9.2
SRSF1Q07955 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC12.5□□□□□ -0.413e-7■□□□□ 9.2
SRSF1Q07955 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.543e-7■□□□□ 9.2
SRSF1Q07955 MLLT10-215ENST00000495130 744 ntTSL 311.64□□□□□ -0.553e-7■□□□□ 9.2
SRSF1Q07955 WASHC2C-201ENST00000336378 4669 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.593e-7■□□□□ 9.2
SRSF1Q07955 WASHC2C-210ENST00000623400 4616 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.623e-7■□□□□ 9.2
SRSF1Q07955 MLLT10-211ENST00000471315 319 ntTSL 310.08□□□□□ -0.83e-7■□□□□ 9.2
SRSF1Q07955 MLLT10-202ENST00000377059 4850 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.423e-7■□□□□ 9.2
SRSF1Q07955 MLLT10-217ENST00000631589 4955 ntAPPRIS ALT2 TSL 5 BASIC5.23□□□□□ -1.573e-7■□□□□ 9.2
SRSF1Q07955 CHRD-217ENST00000496527 588 ntTSL 420.87■□□□□ 0.933e-8■□□□□ 9.2
SRSF1Q07955 AFDN-218ENST00000507704 1031 ntTSL 313.03□□□□□ -0.322e-6■□□□□ 9.2
SRSF1Q07955 PKD1P6-203ENST00000538100 705 ntTSL 319.75■□□□□ 0.752e-7■□□□□ 9.2
SRSF1Q07955 PDIA5-207ENST00000489923 1651 ntTSL 1 (best)18.12■□□□□ 0.492e-7■□□□□ 9.2
SRSF1Q07955 PKD1P6-201ENST00000343738 4769 ntBASIC17.11■□□□□ 0.332e-7■□□□□ 9.2
SRSF1Q07955 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.292e-7■□□□□ 9.2
SRSF1Q07955 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.232e-7■□□□□ 9.2
SRSF1Q07955 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC13.53□□□□□ -0.242e-7■□□□□ 9.2
SRSF1Q07955 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.262e-7■□□□□ 9.2
SRSF1Q07955 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.282e-7■□□□□ 9.2
SRSF1Q07955 QRICH2-203ENST00000524722 2253 ntTSL 1 (best)11.1□□□□□ -0.632e-7■□□□□ 9.2
SRSF1Q07955 QRICH2-201ENST00000262765 5357 ntAPPRIS P2 TSL 1 (best) BASIC9.69□□□□□ -0.862e-7■□□□□ 9.2
SRSF1Q07955 RPS4Y1-202ENST00000430575 811 ntTSL 35.72□□□□□ -1.492e-7■□□□□ 9.2
SRSF1Q07955 RPS4Y1-203ENST00000477725 998 ntTSL 25.36□□□□□ -1.552e-7■□□□□ 9.2
SRSF1Q07955 RPS4Y1-204ENST00000515575 454 ntTSL 34.65□□□□□ -1.672e-7■□□□□ 9.2
SRSF1Q07955 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.732e-7■□□□□ 9.2
SRSF1Q07955 SEMA4G-211ENST00000521006 4656 ntTSL 1 (best)10.71□□□□□ -0.691e-6■□□□□ 9.2
SRSF1Q07955 PRICKLE3-202ENST00000376317 574 ntTSL 419.29■□□□□ 0.687e-8■□□□□ 9.2
SRSF1Q07955 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.337e-8■□□□□ 9.2
SRSF1Q07955 MAPRE3-206ENST00000475633 1160 ntTSL 216.95■□□□□ 0.37e-8■□□□□ 9.2
SRSF1Q07955 PRICKLE3-207ENST00000611313 547 ntTSL 316.45■□□□□ 0.227e-8■□□□□ 9.2
SRSF1Q07955 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC16.14■□□□□ 0.177e-8■□□□□ 9.2
SRSF1Q07955 STAG3L5P-PVRIG2P-PILRB-203ENST00000470714 868 ntTSL 315□□□□□ -0.017e-10■□□□□ 9.2
SRSF1Q07955 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC14.52□□□□□ -0.097e-10■□□□□ 9.2
SRSF1Q07955 PRICKLE3-203ENST00000432913 990 ntTSL 514.45□□□□□ -0.17e-8■□□□□ 9.2
SRSF1Q07955 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.137e-8■□□□□ 9.2
SRSF1Q07955 BCCIP-203ENST00000368759 1433 ntTSL 1 (best) BASIC12.89□□□□□ -0.357e-10■□□□□ 9.2
SRSF1Q07955 PRICKLE3-201ENST00000376310 806 ntTSL 212.82□□□□□ -0.367e-8■□□□□ 9.2
SRSF1Q07955 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.457e-8■□□□□ 9.2
SRSF1Q07955 CPNE1-227ENST00000498056 362 ntTSL 211.91□□□□□ -0.57e-8■□□□□ 9.2
SRSF1Q07955 STAG3L5P-206ENST00000488972 552 ntTSL 411.81□□□□□ -0.527e-10■□□□□ 9.2
SRSF1Q07955 STAG3L5P-PVRIG2P-PILRB-205ENST00000483329 819 ntTSL 511.74□□□□□ -0.537e-10■□□□□ 9.2
SRSF1Q07955 BCCIP-201ENST00000278100 1236 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.597e-10■□□□□ 9.2
SRSF1Q07955 USP14-208ENST00000582707 1803 ntTSL 5 BASIC11.09□□□□□ -0.637e-8■□□□□ 9.2
Retrieved 100 of 14,836 protein–RNA pairs in 472.6 ms