RNA–Protein interactions for RNA: ENST00000265375.13

CCNY-201, Transcript of cyclin Y, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCNY, Length 4,768 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNY-201ENST00000265375 NISCHQ9Y2I1 1504 aa27.23■■□□□ 1.95
CCNY-201ENST00000265375 DCAF8L2P0C7V8 631 aa26.65■■□□□ 1.86
CCNY-201ENST00000265375 SUPT5HO00267 1087 aaKnown RBP25.69■■□□□ 1.7
CCNY-201ENST00000265375 SHROOM4Q9ULL8 1493 aa25.57■■□□□ 1.68
CCNY-201ENST00000265375 EHMT2Q96KQ7 1210 aa24.51■■□□□ 1.51
CCNY-201ENST00000265375 FAM9AQ8IZU1 332 aaPredicted RBP24.11■■□□□ 1.45
CCNY-201ENST00000265375 PCGF6Q9BYE7 350 aa23.89■■□□□ 1.42
CCNY-201ENST00000265375 TRIM41Q8WV44 630 aa23.74■■□□□ 1.39
CCNY-201ENST00000265375 TTBK1Q5TCY1 1321 aaPredicted RBP23.64■■□□□ 1.37
CCNY-201ENST00000265375 APLP2Q06481 763 aa23.51■■□□□ 1.35
CCNY-201ENST00000265375 CHIC1Q5VXU3 224 aa23.4■■□□□ 1.34
CCNY-201ENST00000265375 RANGAP1P46060 587 aaPredicted RBP23.37■■□□□ 1.33
CCNY-201ENST00000265375 LOC105371045A0A1W2PR82 267 aa23.25■■□□□ 1.31
CCNY-201ENST00000265375 UBTFP17480 764 aaKnown RBP23.21■■□□□ 1.31
CCNY-201ENST00000265375 PPARGC1BQ86YN6 1023 aaKnown RBP23.17■■□□□ 1.3
CCNY-201ENST00000265375 CCER1Q8TC90 406 aaPredicted RBP23.09■■□□□ 1.29
CCNY-201ENST00000265375 ZEB1P37275 1124 aaPredicted RBP23.02■■□□□ 1.28
CCNY-201ENST00000265375 ABCC9O60706 1549 aa22.99■■□□□ 1.27
CCNY-201ENST00000265375 TRIM26Q12899 539 aaPredicted RBP22.95■■□□□ 1.26
CCNY-201ENST00000265375 ATP1B4Q9UN42 357 aaPredicted RBP22.89■■□□□ 1.25
CCNY-201ENST00000265375 HRCP23327 699 aa22.87■■□□□ 1.25
CCNY-201ENST00000265375 PABPN1Q86U42 306 aaKnown RBP eCLIP22.73■■□□□ 1.23
CCNY-201ENST00000265375 ZCCHC6Q5VYS8 1495 aaKnown RBP22.66■■□□□ 1.22
CCNY-201ENST00000265375 CENPBP07199 599 aaPredicted RBP22.57■■□□□ 1.2
CCNY-201ENST00000265375 PELP1Q8IZL8 1130 aaKnown RBP22.54■■□□□ 1.2
CCNY-201ENST00000265375 HNRNPUL2Q1KMD3 747 aaKnown RBP22.45■■□□□ 1.18
CCNY-201ENST00000265375 ITGAEP38570 1179 aa22.42■■□□□ 1.18
CCNY-201ENST00000265375 YTHDC1Q96MU7 727 aaKnown RBP22.42■■□□□ 1.18
CCNY-201ENST00000265375 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.37■■□□□ 1.17
CCNY-201ENST00000265375 CCDC180Q9P1Z9 1646 aa22.3■■□□□ 1.16
CCNY-201ENST00000265375 SCRIBQ14160 1630 aa22.28■■□□□ 1.16
CCNY-201ENST00000265375 CSRNP3Q8WYN3 585 aa22.03■■□□□ 1.12
CCNY-201ENST00000265375 DIEXFQ68CQ4 756 aaKnown RBP21.95■■□□□ 1.1
CCNY-201ENST00000265375 MYO15BQ96JP2 1530 aa21.91■■□□□ 1.1
CCNY-201ENST00000265375 FAM50AQ14320 339 aaKnown RBP21.88■■□□□ 1.09
CCNY-201ENST00000265375 NEFLP07196 543 aa21.87■■□□□ 1.09
CCNY-201ENST00000265375 RSF1Q96T23 1441 aaPredicted RBP21.85■■□□□ 1.09
CCNY-201ENST00000265375 DCAF1Q9Y4B6 1507 aa21.79■■□□□ 1.08
CCNY-201ENST00000265375 POLR3GLQ9BT43 218 aa21.75■■□□□ 1.07
CCNY-201ENST00000265375 P3H3Q8IVL6 736 aa21.73■■□□□ 1.07
CCNY-201ENST00000265375 CNGB1Q14028 1251 aaPredicted RBP21.69■■□□□ 1.06
CCNY-201ENST00000265375 NEUROD1Q13562 356 aa21.68■■□□□ 1.06
CCNY-201ENST00000265375 ERICH6Q7L0X2 663 aa21.63■■□□□ 1.05
CCNY-201ENST00000265375 MYT1LQ9UL68 1186 aa21.63■■□□□ 1.05
CCNY-201ENST00000265375 TRIM52Q96A61 297 aa21.58■■□□□ 1.04
CCNY-201ENST00000265375 RB1CC1Q8TDY2 1594 aa21.56■■□□□ 1.04
CCNY-201ENST00000265375 ZNF316A6NFI3 1004 aaPredicted RBP21.56■■□□□ 1.04
CCNY-201ENST00000265375 NACADO15069 1562 aa21.52■■□□□ 1.04
CCNY-201ENST00000265375 ARID3CA6NKF2 412 aa21.51■■□□□ 1.03
CCNY-201ENST00000265375 CECR2Q9BXF3 1484 aa21.51■■□□□ 1.03
CCNY-201ENST00000265375 FBLN2P98095 1184 aa21.51■■□□□ 1.03
CCNY-201ENST00000265375 GTF3C3Q9Y5Q9 886 aa21.43■■□□□ 1.02
CCNY-201ENST00000265375 ZNF326Q5BKZ1 582 aaKnown RBP21.3■■□□□ 1
CCNY-201ENST00000265375 CLIP1P30622 1438 aa21.3■■□□□ 1
CCNY-201ENST00000265375 CEP162Q5TB80 1403 aa21.28■■□□□ 1
CCNY-201ENST00000265375 WRNQ14191 1432 aaPredicted RBP eCLIP21.28■■□□□ 1
CCNY-201ENST00000265375 ACIN1Q9UKV3 1341 aaKnown RBP21.25■□□□□ 0.99
CCNY-201ENST00000265375 BAZ1AQ9NRL2 1556 aaPredicted RBP21.24■□□□□ 0.99
CCNY-201ENST00000265375 ANP32CO43423 234 aa21.23■□□□□ 0.99
CCNY-201ENST00000265375 MROH2BQ7Z745 1585 aa21.21■□□□□ 0.99
CCNY-201ENST00000265375 BCANQ96GW7 911 aa21.2■□□□□ 0.98
CCNY-201ENST00000265375 EEA1Q15075 1411 aa21.2■□□□□ 0.98
CCNY-201ENST00000265375 BAZ1BQ9UIG0 1483 aaKnown RBP21.19■□□□□ 0.98
CCNY-201ENST00000265375 ZNF777Q9ULD5 760 aaPredicted RBP21.18■□□□□ 0.98
CCNY-201ENST00000265375 GOLGA3Q08378 1498 aa21.18■□□□□ 0.98
CCNY-201ENST00000265375 TNIKQ9UKE5 1360 aa21.12■□□□□ 0.97
CCNY-201ENST00000265375 SLC4A1APQ9BWU0 796 aaKnown RBP21.1■□□□□ 0.97
CCNY-201ENST00000265375 SOGA1O94964 1423 aa21.09■□□□□ 0.97
CCNY-201ENST00000265375 CHIC2Q9UKJ5 165 aa21.06■□□□□ 0.96
CCNY-201ENST00000265375 CDK11AQ9UQ88 783 aaPredicted RBP21.06■□□□□ 0.96
CCNY-201ENST00000265375 DDX10Q13206 875 aaKnown RBP21.02■□□□□ 0.95
CCNY-201ENST00000265375 TONSLQ96HA7 1378 aa21.01■□□□□ 0.95
CCNY-201ENST00000265375 CEP164Q9UPV0 1460 aa21■□□□□ 0.95
CCNY-201ENST00000265375 CCDC88BA6NC98 1476 aa21■□□□□ 0.95
CCNY-201ENST00000265375 MTUS2Q5JR59 1369 aa20.97■□□□□ 0.95
CCNY-201ENST00000265375 MYT1Q01538 1121 aa20.97■□□□□ 0.95
CCNY-201ENST00000265375 KIF27Q86VH2 1401 aa20.96■□□□□ 0.95
CCNY-201ENST00000265375 ABCC8Q09428 1581 aa20.96■□□□□ 0.95
CCNY-201ENST00000265375 MIER1Q8N108 512 aa20.95■□□□□ 0.94
CCNY-201ENST00000265375 HIRIP3Q9BW71 556 aaPredicted RBP20.9■□□□□ 0.94
CCNY-201ENST00000265375 WIZO95785 1651 aa20.89■□□□□ 0.93
CCNY-201ENST00000265375 DAXXQ9UER7 740 aaPredicted RBP20.85■□□□□ 0.93
CCNY-201ENST00000265375 SCAF1Q9H7N4 1312 aaKnown RBP20.83■□□□□ 0.93
CCNY-201ENST00000265375 RRP7BPQ9NSQ0 103 aa20.82■□□□□ 0.92
CCNY-201ENST00000265375 CHMP7Q8WUX9 453 aaPredicted RBP20.82■□□□□ 0.92
CCNY-201ENST00000265375 HNRNPUQ00839 825 aaKnown RBP eCLIP20.75■□□□□ 0.918e-7■□□□□ 8.5
CCNY-201ENST00000265375 FKBP8Q14318 412 aa20.74■□□□□ 0.91
CCNY-201ENST00000265375 CLSPNQ9HAW4 1339 aa20.71■□□□□ 0.91
CCNY-201ENST00000265375 CUX2O14529 1486 aa20.71■□□□□ 0.91
CCNY-201ENST00000265375 TOP2AP11388 1531 aaKnown RBP20.71■□□□□ 0.91
CCNY-201ENST00000265375 FAM9BQ8IZU0 186 aa20.7■□□□□ 0.9
CCNY-201ENST00000265375 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.7■□□□□ 0.9
CCNY-201ENST00000265375 CARMIL1Q5VZK9 1371 aa20.69■□□□□ 0.9
CCNY-201ENST00000265375 TSPY4P0CV99 314 aa20.68■□□□□ 0.9
CCNY-201ENST00000265375 TSPY10P0CW01 314 aa20.68■□□□□ 0.9
CCNY-201ENST00000265375 KANK4Q5T7N3 995 aaPredicted RBP20.66■□□□□ 0.9
CCNY-201ENST00000265375 SIN3AQ96ST3 1273 aa20.66■□□□□ 0.9
CCNY-201ENST00000265375 VPS8Q8N3P4 1428 aa20.65■□□□□ 0.9
CCNY-201ENST00000265375 KDM2AQ9Y2K7 1162 aa20.65■□□□□ 0.9
CCNY-201ENST00000265375 SMARCA2P51531 1590 aa20.62■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms