RNA–Protein interactions for RNA: ENST00000368759.5

BCCIP-203, Transcript of BRCA2 and CDKN1A interacting protein, humanhuman

TSL 1 (best) BASIC

Gene BCCIP, Length 1,433 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BCCIP-203ENST00000368759 NISCHQ9Y2I1 1504 aa32.99■■■□□ 2.87
BCCIP-203ENST00000368759 ABCC9O60706 1549 aa29.68■■■□□ 2.34
BCCIP-203ENST00000368759 CCDC180Q9P1Z9 1646 aa29.63■■■□□ 2.33
BCCIP-203ENST00000368759 RB1CC1Q8TDY2 1594 aa28.2■■■□□ 2.1
BCCIP-203ENST00000368759 NACADO15069 1562 aa27.99■■■□□ 2.07
BCCIP-203ENST00000368759 DNAJC5BQ9UF47 199 aa27.91■■■□□ 2.06
BCCIP-203ENST00000368759 DCAF8L2P0C7V8 631 aa27.74■■■□□ 2.03
BCCIP-203ENST00000368759 UNC13AQ9UPW8 1703 aa27.64■■■□□ 2.01
BCCIP-203ENST00000368759 MYO15BQ96JP2 1530 aa27.61■■■□□ 2.01
BCCIP-203ENST00000368759 PABPN1Q86U42 306 aaKnown RBP eCLIP27.58■■■□□ 2.01
BCCIP-203ENST00000368759 BICRAQ9NZM4 1560 aa27.46■■□□□ 1.99
BCCIP-203ENST00000368759 ZCCHC6Q5VYS8 1495 aaKnown RBP27.36■■□□□ 1.97
BCCIP-203ENST00000368759 DCAF1Q9Y4B6 1507 aa27.24■■□□□ 1.95
BCCIP-203ENST00000368759 SHROOM4Q9ULL8 1493 aa27.02■■□□□ 1.92
BCCIP-203ENST00000368759 SCRIBQ14160 1630 aa27.01■■□□□ 1.91
BCCIP-203ENST00000368759 CC2D2AQ9P2K1 1620 aa26.82■■□□□ 1.88
BCCIP-203ENST00000368759 EIF4G1Q04637 1599 aaKnown RBP26.75■■□□□ 1.87
BCCIP-203ENST00000368759 CECR2Q9BXF3 1484 aa26.72■■□□□ 1.87
BCCIP-203ENST00000368759 NCAPD3P42695 1498 aa25.86■■□□□ 1.73
BCCIP-203ENST00000368759 ATAD2BQ9ULI0 1458 aa25.79■■□□□ 1.72
BCCIP-203ENST00000368759 SMARCA4P51532 1647 aa25.76■■□□□ 1.71
BCCIP-203ENST00000368759 HMGXB3Q12766 1538 aa25.68■■□□□ 1.7
BCCIP-203ENST00000368759 SMARCA2P51531 1590 aa25.68■■□□□ 1.7
BCCIP-203ENST00000368759 BAZ1AQ9NRL2 1556 aaPredicted RBP25.59■■□□□ 1.69
BCCIP-203ENST00000368759 DNAJC5Q9H3Z4 198 aa25.59■■□□□ 1.69
BCCIP-203ENST00000368759 CUX2O14529 1486 aa25.57■■□□□ 1.68
BCCIP-203ENST00000368759 ERCC6Q03468 1493 aa25.57■■□□□ 1.68
BCCIP-203ENST00000368759 PEG3Q9GZU2 1588 aa25.52■■□□□ 1.68
BCCIP-203ENST00000368759 BAZ1BQ9UIG0 1483 aaKnown RBP25.51■■□□□ 1.67
BCCIP-203ENST00000368759 NESP48681 1621 aa25.5■■□□□ 1.67
BCCIP-203ENST00000368759 MROH2BQ7Z745 1585 aa25.45■■□□□ 1.67
BCCIP-203ENST00000368759 THOC2Q8NI27 1593 aaKnown RBP25.29■■□□□ 1.64
BCCIP-203ENST00000368759 LAMC3Q9Y6N6 1575 aa25.27■■□□□ 1.64
BCCIP-203ENST00000368759 KIF21AQ7Z4S6 1674 aa25.18■■□□□ 1.62
BCCIP-203ENST00000368759 WIZO95785 1651 aa25.14■■□□□ 1.61
BCCIP-203ENST00000368759 PDS5BQ9NTI5 1447 aa25.08■■□□□ 1.61
BCCIP-203ENST00000368759 CADPSQ9ULU8 1353 aa25.05■■□□□ 1.6
BCCIP-203ENST00000368759 MRC2Q9UBG0 1479 aa24.92■■□□□ 1.58
BCCIP-203ENST00000368759 WDR62O43379 1518 aa24.9■■□□□ 1.58
BCCIP-203ENST00000368759 RSF1Q96T23 1441 aaPredicted RBP24.87■■□□□ 1.57
BCCIP-203ENST00000368759 TOP2AP11388 1531 aaKnown RBP24.81■■□□□ 1.56
BCCIP-203ENST00000368759 CEP164Q9UPV0 1460 aa24.8■■□□□ 1.56
BCCIP-203ENST00000368759 CFTRP13569 1480 aa24.78■■□□□ 1.56
BCCIP-203ENST00000368759 FANCD2Q9BXW9 1451 aa24.78■■□□□ 1.56
BCCIP-203ENST00000368759 URB2Q14146 1524 aaKnown RBP24.63■■□□□ 1.53
BCCIP-203ENST00000368759 PRDM2Q13029 1718 aa24.55■■□□□ 1.52
BCCIP-203ENST00000368759 CCDC88BA6NC98 1476 aa24.51■■□□□ 1.51
BCCIP-203ENST00000368759 TRIM41Q8WV44 630 aa24.43■■□□□ 1.5
BCCIP-203ENST00000368759 TOPBP1Q92547 1522 aa24.33■■□□□ 1.49
BCCIP-203ENST00000368759 ZNF608Q9ULD9 1512 aaPredicted RBP24.33■■□□□ 1.49
BCCIP-203ENST00000368759 OSCARQ8IYS5 282 aa24.32■■□□□ 1.48
BCCIP-203ENST00000368759 IFT140Q96RY7 1462 aa24.31■■□□□ 1.48
BCCIP-203ENST00000368759 DNMBPQ6XZF7 1577 aa24.23■■□□□ 1.47
BCCIP-203ENST00000368759 EIF4G3O43432 1585 aaKnown RBP24.2■■□□□ 1.46
BCCIP-203ENST00000368759 ABCC8Q09428 1581 aa24.19■■□□□ 1.46
BCCIP-203ENST00000368759 TARBP1Q13395 1621 aaKnown RBP24.14■■□□□ 1.45
BCCIP-203ENST00000368759 RIMBP3CA6NJZ7 1639 aa24.13■■□□□ 1.45
BCCIP-203ENST00000368759 RIMBP3BA6NNM3 1639 aa24.13■■□□□ 1.45
BCCIP-203ENST00000368759 RIMBP3Q9UFD9 1639 aa24.13■■□□□ 1.45
BCCIP-203ENST00000368759 POLA1P09884 1462 aaPredicted RBP24.08■■□□□ 1.45
BCCIP-203ENST00000368759 AQRO60306 1485 aaKnown RBP eCLIP24.07■■□□□ 1.442e-6■■□□□ 14.4
BCCIP-203ENST00000368759 ARHGEF11O15085 1522 aa24.04■■□□□ 1.44
BCCIP-203ENST00000368759 CHD1O14646 1710 aa24.01■■□□□ 1.43
BCCIP-203ENST00000368759 RAD54L2Q9Y4B4 1467 aa23.99■■□□□ 1.43
BCCIP-203ENST00000368759 FGD5Q6ZNL6 1462 aa23.92■■□□□ 1.42
BCCIP-203ENST00000368759 SOGA1O94964 1423 aa23.91■■□□□ 1.42
BCCIP-203ENST00000368759 CUX1P39880 1505 aa23.91■■□□□ 1.42
BCCIP-203ENST00000368759 TDRD9Q8NDG6 1382 aaKnown RBP23.89■■□□□ 1.42
BCCIP-203ENST00000368759 WDR97A6NE52 1622 aa23.84■■□□□ 1.41
BCCIP-203ENST00000368759 SNAPC4Q5SXM2 1469 aa23.84■■□□□ 1.41
BCCIP-203ENST00000368759 FBLN2P98095 1184 aa23.84■■□□□ 1.41
BCCIP-203ENST00000368759 ARAP1Q96P48 1450 aa23.81■■□□□ 1.4
BCCIP-203ENST00000368759 CYB5RLQ6IPT4 315 aa23.78■■□□□ 1.4
BCCIP-203ENST00000368759 CLASP1Q7Z460 1538 aa23.75■■□□□ 1.39
BCCIP-203ENST00000368759 MAGI1Q96QZ7 1491 aaPredicted RBP23.74■■□□□ 1.39
BCCIP-203ENST00000368759 GRIN2BQ13224 1484 aa23.73■■□□□ 1.39
BCCIP-203ENST00000368759 PBRM1Q86U86 1689 aa23.68■■□□□ 1.38
BCCIP-203ENST00000368759 SYNJ1O43426 1573 aa23.67■■□□□ 1.38
BCCIP-203ENST00000368759 SYNJ2O15056 1496 aa23.67■■□□□ 1.38
BCCIP-203ENST00000368759 SUPT5HO00267 1087 aaKnown RBP23.66■■□□□ 1.38
BCCIP-203ENST00000368759 ABCA5Q8WWZ7 1642 aa23.65■■□□□ 1.38
BCCIP-203ENST00000368759 CHMP7Q8WUX9 453 aaPredicted RBP23.65■■□□□ 1.38
BCCIP-203ENST00000368759 ABCA10Q8WWZ4 1543 aa23.64■■□□□ 1.37
BCCIP-203ENST00000368759 GAPVD1Q14C86 1478 aa23.64■■□□□ 1.37
BCCIP-203ENST00000368759 BIVM-ERCC5R4GMW8 1640 aa23.51■■□□□ 1.35
BCCIP-203ENST00000368759 TRHP20396 242 aaPredicted RBP23.5■■□□□ 1.35
BCCIP-203ENST00000368759 TOP2BQ02880 1626 aa23.49■■□□□ 1.35
BCCIP-203ENST00000368759 WRNQ14191 1432 aaPredicted RBP eCLIP23.48■■□□□ 1.35
BCCIP-203ENST00000368759 ADAMTS12P58397 1594 aa23.47■■□□□ 1.35
BCCIP-203ENST00000368759 GRIN2AQ12879 1464 aa23.44■■□□□ 1.34
BCCIP-203ENST00000368759 CEP170Q5SW79 1584 aa23.4■■□□□ 1.34
BCCIP-203ENST00000368759 ERCC6L2Q5T890 1561 aa23.4■■□□□ 1.34
BCCIP-203ENST00000368759 NUP160Q12769 1436 aa23.38■■□□□ 1.33
BCCIP-203ENST00000368759 FHAD1B1AJZ9 1412 aa23.34■■□□□ 1.33
BCCIP-203ENST00000368759 ERICH3Q5RHP9 1530 aa23.32■■□□□ 1.32
BCCIP-203ENST00000368759 SHROOM2Q13796 1616 aa23.31■■□□□ 1.32
BCCIP-203ENST00000368759 RUSC2Q8N2Y8 1516 aa23.14■■□□□ 1.3
BCCIP-203ENST00000368759 PRG4Q92954 1404 aaPredicted RBP23.13■■□□□ 1.29
BCCIP-203ENST00000368759 JPH4Q96JJ6 628 aa23.07■■□□□ 1.28
BCCIP-203ENST00000368759 KIF13AQ9H1H9 1805 aa23.01■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms