RNA–Protein interactions for RNA: ENST00000462018.1

GABRE-204, Transcript of gamma-aminobutyric acid type A receptor epsilon subunit, humanhuman

TSL 3

Gene GABRE, Length 650 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRE-204ENST00000462018 NISCHQ9Y2I1 1504 aa21.1■□□□□ 0.97
GABRE-204ENST00000462018 AEBP2Q6ZN18 517 aaPredicted RBP20.89■□□□□ 0.93
GABRE-204ENST00000462018 CHIC1Q5VXU3 224 aa20.68■□□□□ 0.9
GABRE-204ENST00000462018 ABCC9O60706 1549 aa20.48■□□□□ 0.87
GABRE-204ENST00000462018 DNAJC5BQ9UF47 199 aa20.14■□□□□ 0.81
GABRE-204ENST00000462018 CCDC180Q9P1Z9 1646 aa19.43■□□□□ 0.7
GABRE-204ENST00000462018 DNAJC5Q9H3Z4 198 aa19.17■□□□□ 0.66
GABRE-204ENST00000462018 RB1CC1Q8TDY2 1594 aa18.97■□□□□ 0.63
GABRE-204ENST00000462018 PABPN1Q86U42 306 aaKnown RBP eCLIP18.84■□□□□ 0.61
GABRE-204ENST00000462018 UNC13AQ9UPW8 1703 aa18.68■□□□□ 0.58
GABRE-204ENST00000462018 NACADO15069 1562 aa18.56■□□□□ 0.56
GABRE-204ENST00000462018 BICRAQ9NZM4 1560 aa18.55■□□□□ 0.56
GABRE-204ENST00000462018 CECR2Q9BXF3 1484 aa18.52■□□□□ 0.56
GABRE-204ENST00000462018 CC2D2AQ9P2K1 1620 aa18.45■□□□□ 0.54
GABRE-204ENST00000462018 PHF23Q9BUL5 403 aaPredicted RBP18.25■□□□□ 0.51
GABRE-204ENST00000462018 DCAF8L2P0C7V8 631 aa18.16■□□□□ 0.5
GABRE-204ENST00000462018 EIF4G1Q04637 1599 aaKnown RBP18.14■□□□□ 0.49
GABRE-204ENST00000462018 SHROOM4Q9ULL8 1493 aa18.07■□□□□ 0.48
GABRE-204ENST00000462018 CUX2O14529 1486 aa18.02■□□□□ 0.48
GABRE-204ENST00000462018 TRIM41Q8WV44 630 aa17.94■□□□□ 0.46
GABRE-204ENST00000462018 MYO15BQ96JP2 1530 aa17.93■□□□□ 0.46
GABRE-204ENST00000462018 ERCC6Q03468 1493 aa17.7■□□□□ 0.42
GABRE-204ENST00000462018 SCRIBQ14160 1630 aa17.7■□□□□ 0.42
GABRE-204ENST00000462018 SENP3Q9H4L4 574 aaPredicted RBP17.64■□□□□ 0.41
GABRE-204ENST00000462018 THOC2Q8NI27 1593 aaKnown RBP17.39■□□□□ 0.37
GABRE-204ENST00000462018 NESP48681 1621 aa17.32■□□□□ 0.36
GABRE-204ENST00000462018 DCAF1Q9Y4B6 1507 aa17.32■□□□□ 0.36
GABRE-204ENST00000462018 ZCCHC6Q5VYS8 1495 aaKnown RBP17.31■□□□□ 0.36
GABRE-204ENST00000462018 SMARCA2P51531 1590 aa17.18■□□□□ 0.34
GABRE-204ENST00000462018 NCAPD3P42695 1498 aa17.13■□□□□ 0.33
GABRE-204ENST00000462018 BAZ1AQ9NRL2 1556 aaPredicted RBP17.11■□□□□ 0.33
GABRE-204ENST00000462018 KIF21AQ7Z4S6 1674 aa17.09■□□□□ 0.33
GABRE-204ENST00000462018 RIMBP3CA6NJZ7 1639 aa17.01■□□□□ 0.31
GABRE-204ENST00000462018 RIMBP3BA6NNM3 1639 aa17.01■□□□□ 0.31
GABRE-204ENST00000462018 RIMBP3Q9UFD9 1639 aa17.01■□□□□ 0.31
GABRE-204ENST00000462018 ATAD2BQ9ULI0 1458 aa16.98■□□□□ 0.31
GABRE-204ENST00000462018 HMGXB3Q12766 1538 aa16.96■□□□□ 0.31
GABRE-204ENST00000462018 LAMC3Q9Y6N6 1575 aa16.95■□□□□ 0.3
GABRE-204ENST00000462018 PLPPR3Q6T4P5 718 aa16.93■□□□□ 0.3
GABRE-204ENST00000462018 OSCARQ8IYS5 282 aa16.92■□□□□ 0.3
GABRE-204ENST00000462018 WDR62O43379 1518 aa16.85■□□□□ 0.29
GABRE-204ENST00000462018 MRC2Q9UBG0 1479 aa16.82■□□□□ 0.28
GABRE-204ENST00000462018 PDS5BQ9NTI5 1447 aa16.82■□□□□ 0.28
GABRE-204ENST00000462018 ARHGEF11O15085 1522 aa16.81■□□□□ 0.28
GABRE-204ENST00000462018 TRHP20396 242 aaPredicted RBP16.79■□□□□ 0.28
GABRE-204ENST00000462018 BAZ1BQ9UIG0 1483 aaKnown RBP16.74■□□□□ 0.27
GABRE-204ENST00000462018 SMARCA4P51532 1647 aa16.74■□□□□ 0.27
GABRE-204ENST00000462018 CYB5RLQ6IPT4 315 aa16.65■□□□□ 0.26
GABRE-204ENST00000462018 ILDR1Q86SU0 546 aaPredicted RBP16.62■□□□□ 0.25
GABRE-204ENST00000462018 ARAP1Q96P48 1450 aa16.61■□□□□ 0.25
GABRE-204ENST00000462018 PEG3Q9GZU2 1588 aa16.55■□□□□ 0.24
GABRE-204ENST00000462018 CADPSQ9ULU8 1353 aa16.54■□□□□ 0.24
GABRE-204ENST00000462018 CEP164Q9UPV0 1460 aa16.54■□□□□ 0.24
GABRE-204ENST00000462018 FANCD2Q9BXW9 1451 aa16.42■□□□□ 0.22
GABRE-204ENST00000462018 URB2Q14146 1524 aaKnown RBP16.41■□□□□ 0.22
GABRE-204ENST00000462018 ZNF608Q9ULD9 1512 aaPredicted RBP16.39■□□□□ 0.21
GABRE-204ENST00000462018 FOXD1Q16676 465 aa16.36■□□□□ 0.21
GABRE-204ENST00000462018 CHD1O14646 1710 aa16.36■□□□□ 0.21
GABRE-204ENST00000462018 MROH2BQ7Z745 1585 aa16.3■□□□□ 0.2
GABRE-204ENST00000462018 RSF1Q96T23 1441 aaPredicted RBP16.3■□□□□ 0.2
GABRE-204ENST00000462018 EIF4G3O43432 1585 aaKnown RBP16.26■□□□□ 0.19
GABRE-204ENST00000462018 IFT140Q96RY7 1462 aa16.22■□□□□ 0.19
GABRE-204ENST00000462018 CFTRP13569 1480 aa16.17■□□□□ 0.18
GABRE-204ENST00000462018 CLASP1Q7Z460 1538 aa16.11■□□□□ 0.17
GABRE-204ENST00000462018 FBLN2P98095 1184 aa16.08■□□□□ 0.16
GABRE-204ENST00000462018 WIZO95785 1651 aa16.07■□□□□ 0.16
GABRE-204ENST00000462018 ADRA2BP18089 450 aa16.06■□□□□ 0.16
GABRE-204ENST00000462018 AQRO60306 1485 aaKnown RBP eCLIP16.04■□□□□ 0.168e-7■■■□□ 17.6
GABRE-204ENST00000462018 KDM4FA0A1W2PPD8 638 aa16.03■□□□□ 0.16
GABRE-204ENST00000462018 PPP6R1Q9UPN7 881 aa16.03■□□□□ 0.16
GABRE-204ENST00000462018 TOPBP1Q92547 1522 aa16.02■□□□□ 0.15
GABRE-204ENST00000462018 PRDM2Q13029 1718 aa16.02■□□□□ 0.15
GABRE-204ENST00000462018 TARBP1Q13395 1621 aaKnown RBP15.98■□□□□ 0.15
GABRE-204ENST00000462018 KIF13AQ9H1H9 1805 aa15.98■□□□□ 0.15
GABRE-204ENST00000462018 GAPVD1Q14C86 1478 aa15.97■□□□□ 0.15
GABRE-204ENST00000462018 SYNJ1O43426 1573 aa15.94■□□□□ 0.14
GABRE-204ENST00000462018 SNAPC4Q5SXM2 1469 aa15.9■□□□□ 0.14
GABRE-204ENST00000462018 ERCC6L2Q5T890 1561 aa15.87■□□□□ 0.13
GABRE-204ENST00000462018 DNMBPQ6XZF7 1577 aa15.86■□□□□ 0.13
GABRE-204ENST00000462018 HECW2Q9P2P5 1572 aa15.86■□□□□ 0.13
GABRE-204ENST00000462018 ABCC8Q09428 1581 aa15.79■□□□□ 0.12
GABRE-204ENST00000462018 POLA1P09884 1462 aaPredicted RBP15.78■□□□□ 0.12
GABRE-204ENST00000462018 KDM6BO15054 1643 aa15.77■□□□□ 0.12
GABRE-204ENST00000462018 TDRD9Q8NDG6 1382 aaKnown RBP15.76■□□□□ 0.11
GABRE-204ENST00000462018 FBXO41Q8TF61 875 aa15.76■□□□□ 0.11
GABRE-204ENST00000462018 TOP2AP11388 1531 aaKnown RBP15.76■□□□□ 0.11
GABRE-204ENST00000462018 RAD54L2Q9Y4B4 1467 aa15.76■□□□□ 0.11
GABRE-204ENST00000462018 CHMP7Q8WUX9 453 aaPredicted RBP15.75■□□□□ 0.11
GABRE-204ENST00000462018 LMTK3Q96Q04 1460 aa15.75■□□□□ 0.11
GABRE-204ENST00000462018 MAGI1Q96QZ7 1491 aaPredicted RBP15.74■□□□□ 0.11
GABRE-204ENST00000462018 SYNJ2O15056 1496 aa15.71■□□□□ 0.1
GABRE-204ENST00000462018 ADGRL1O94910 1474 aa15.7■□□□□ 0.1
GABRE-204ENST00000462018 WDR97A6NE52 1622 aa15.67■□□□□ 0.1
GABRE-204ENST00000462018 DIP2BQ9P265 1576 aa15.65■□□□□ 0.1
GABRE-204ENST00000462018 ABCC10Q5T3U5 1492 aa15.65■□□□□ 0.1
GABRE-204ENST00000462018 GRIN2BQ13224 1484 aa15.63■□□□□ 0.09
GABRE-204ENST00000462018 CEP170Q5SW79 1584 aa15.62■□□□□ 0.09
GABRE-204ENST00000462018 SOGA1O94964 1423 aa15.62■□□□□ 0.09
GABRE-204ENST00000462018 FAM69CQ0P6D2 419 aa15.62■□□□□ 0.09
GABRE-204ENST00000462018 PBRM1Q86U86 1689 aa15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms