RNA–Protein interactions for RNA: ENST00000611313.1

PRICKLE3-207, Transcript of prickle planar cell polarity protein 3, humanhuman

TSL 3

Gene PRICKLE3, Length 547 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE3-207ENST00000611313 NISCHQ9Y2I1 1504 aa42.81■■■■■ 4.44
PRICKLE3-207ENST00000611313 CCDC180Q9P1Z9 1646 aa38.21■■■■□ 3.71
PRICKLE3-207ENST00000611313 ABCC9O60706 1549 aa37.87■■■■□ 3.65
PRICKLE3-207ENST00000611313 RB1CC1Q8TDY2 1594 aa36.15■■■■□ 3.38
PRICKLE3-207ENST00000611313 NACADO15069 1562 aa36.02■■■■□ 3.36
PRICKLE3-207ENST00000611313 DCAF8L2P0C7V8 631 aa35.88■■■■□ 3.33
PRICKLE3-207ENST00000611313 MYO15BQ96JP2 1530 aa35.66■■■■□ 3.3
PRICKLE3-207ENST00000611313 ZCCHC6Q5VYS8 1495 aaKnown RBP35.57■■■■□ 3.28
PRICKLE3-207ENST00000611313 UNC13AQ9UPW8 1703 aa35.46■■■■□ 3.27
PRICKLE3-207ENST00000611313 DCAF1Q9Y4B6 1507 aa35.37■■■■□ 3.25
PRICKLE3-207ENST00000611313 PABPN1Q86U42 306 aaKnown RBP eCLIP35.32■■■■□ 3.24
PRICKLE3-207ENST00000611313 DNAJC5BQ9UF47 199 aa35.27■■■■□ 3.24
PRICKLE3-207ENST00000611313 BICRAQ9NZM4 1560 aa35.21■■■■□ 3.23
PRICKLE3-207ENST00000611313 SCRIBQ14160 1630 aa34.88■■■■□ 3.17
PRICKLE3-207ENST00000611313 SHROOM4Q9ULL8 1493 aa34.63■■■■□ 3.13
PRICKLE3-207ENST00000611313 EIF4G1Q04637 1599 aaKnown RBP34.25■■■■□ 3.07
PRICKLE3-207ENST00000611313 CC2D2AQ9P2K1 1620 aa34.23■■■■□ 3.07
PRICKLE3-207ENST00000611313 CECR2Q9BXF3 1484 aa34.03■■■■□ 3.04
PRICKLE3-207ENST00000611313 SMARCA4P51532 1647 aa33.31■■■□□ 2.92
PRICKLE3-207ENST00000611313 NCAPD3P42695 1498 aa33.28■■■□□ 2.92
PRICKLE3-207ENST00000611313 ATAD2BQ9ULI0 1458 aa33.25■■■□□ 2.91
PRICKLE3-207ENST00000611313 BAZ1AQ9NRL2 1556 aaPredicted RBP33.16■■■□□ 2.9
PRICKLE3-207ENST00000611313 SMARCA2P51531 1590 aa33.11■■■□□ 2.89
PRICKLE3-207ENST00000611313 HMGXB3Q12766 1538 aa33.05■■■□□ 2.88
PRICKLE3-207ENST00000611313 MROH2BQ7Z745 1585 aa33.04■■■□□ 2.88
PRICKLE3-207ENST00000611313 PEG3Q9GZU2 1588 aa32.98■■■□□ 2.87
PRICKLE3-207ENST00000611313 BAZ1BQ9UIG0 1483 aaKnown RBP32.89■■■□□ 2.86
PRICKLE3-207ENST00000611313 NESP48681 1621 aa32.69■■■□□ 2.82
PRICKLE3-207ENST00000611313 WIZO95785 1651 aa32.65■■■□□ 2.82
PRICKLE3-207ENST00000611313 ERCC6Q03468 1493 aa32.57■■■□□ 2.8
PRICKLE3-207ENST00000611313 RSF1Q96T23 1441 aaPredicted RBP32.47■■■□□ 2.79
PRICKLE3-207ENST00000611313 LAMC3Q9Y6N6 1575 aa32.43■■■□□ 2.78
PRICKLE3-207ENST00000611313 CUX2O14529 1486 aa32.42■■■□□ 2.78
PRICKLE3-207ENST00000611313 CADPSQ9ULU8 1353 aa32.27■■■□□ 2.76
PRICKLE3-207ENST00000611313 THOC2Q8NI27 1593 aaKnown RBP32.26■■■□□ 2.75
PRICKLE3-207ENST00000611313 KIF21AQ7Z4S6 1674 aa32.26■■■□□ 2.75
PRICKLE3-207ENST00000611313 TOP2AP11388 1531 aaKnown RBP32.21■■■□□ 2.75
PRICKLE3-207ENST00000611313 PDS5BQ9NTI5 1447 aa32.19■■■□□ 2.74
PRICKLE3-207ENST00000611313 CFTRP13569 1480 aa32■■■□□ 2.71
PRICKLE3-207ENST00000611313 DNAJC5Q9H3Z4 198 aa31.99■■■□□ 2.71
PRICKLE3-207ENST00000611313 MRC2Q9UBG0 1479 aa31.94■■■□□ 2.7
PRICKLE3-207ENST00000611313 FANCD2Q9BXW9 1451 aa31.9■■■□□ 2.7
PRICKLE3-207ENST00000611313 CCDC88BA6NC98 1476 aa31.88■■■□□ 2.69
PRICKLE3-207ENST00000611313 CEP164Q9UPV0 1460 aa31.88■■■□□ 2.69
PRICKLE3-207ENST00000611313 WDR62O43379 1518 aa31.87■■■□□ 2.69
PRICKLE3-207ENST00000611313 PRDM2Q13029 1718 aa31.71■■■□□ 2.67
PRICKLE3-207ENST00000611313 URB2Q14146 1524 aaKnown RBP31.67■■■□□ 2.66
PRICKLE3-207ENST00000611313 TOPBP1Q92547 1522 aa31.37■■■□□ 2.61
PRICKLE3-207ENST00000611313 DNMBPQ6XZF7 1577 aa31.26■■■□□ 2.6
PRICKLE3-207ENST00000611313 SUPT5HO00267 1087 aaKnown RBP31.26■■■□□ 2.59
PRICKLE3-207ENST00000611313 ABCC8Q09428 1581 aa31.24■■■□□ 2.59
PRICKLE3-207ENST00000611313 IFT140Q96RY7 1462 aa31.23■■■□□ 2.59
PRICKLE3-207ENST00000611313 ZNF608Q9ULD9 1512 aaPredicted RBP31.22■■■□□ 2.59
PRICKLE3-207ENST00000611313 TARBP1Q13395 1621 aaKnown RBP31.09■■■□□ 2.57
PRICKLE3-207ENST00000611313 POLA1P09884 1462 aaPredicted RBP31.07■■■□□ 2.56
PRICKLE3-207ENST00000611313 EIF4G3O43432 1585 aaKnown RBP31.03■■■□□ 2.56
PRICKLE3-207ENST00000611313 CUX1P39880 1505 aa31■■■□□ 2.55
PRICKLE3-207ENST00000611313 RAD54L2Q9Y4B4 1467 aa30.98■■■□□ 2.55
PRICKLE3-207ENST00000611313 OSCARQ8IYS5 282 aa30.98■■■□□ 2.55
PRICKLE3-207ENST00000611313 AQRO60306 1485 aaKnown RBP eCLIP30.96■■■□□ 2.551e-6■■■■□ 25.8
PRICKLE3-207ENST00000611313 FGD5Q6ZNL6 1462 aa30.93■■■□□ 2.54
PRICKLE3-207ENST00000611313 SOGA1O94964 1423 aa30.9■■■□□ 2.54
PRICKLE3-207ENST00000611313 TDRD9Q8NDG6 1382 aaKnown RBP30.82■■■□□ 2.52
PRICKLE3-207ENST00000611313 CHD1O14646 1710 aa30.74■■■□□ 2.51
PRICKLE3-207ENST00000611313 WDR97A6NE52 1622 aa30.73■■■□□ 2.51
PRICKLE3-207ENST00000611313 TRIM41Q8WV44 630 aa30.72■■■□□ 2.51
PRICKLE3-207ENST00000611313 SNAPC4Q5SXM2 1469 aa30.64■■■□□ 2.5
PRICKLE3-207ENST00000611313 RIMBP3CA6NJZ7 1639 aa30.62■■■□□ 2.49
PRICKLE3-207ENST00000611313 RIMBP3BA6NNM3 1639 aa30.62■■■□□ 2.49
PRICKLE3-207ENST00000611313 RIMBP3Q9UFD9 1639 aa30.62■■■□□ 2.49
PRICKLE3-207ENST00000611313 BIVM-ERCC5R4GMW8 1640 aa30.59■■■□□ 2.49
PRICKLE3-207ENST00000611313 SYNJ1O43426 1573 aa30.59■■■□□ 2.49
PRICKLE3-207ENST00000611313 ABCA10Q8WWZ4 1543 aa30.59■■■□□ 2.49
PRICKLE3-207ENST00000611313 FBLN2P98095 1184 aa30.59■■■□□ 2.49
PRICKLE3-207ENST00000611313 GRIN2BQ13224 1484 aa30.58■■■□□ 2.49
PRICKLE3-207ENST00000611313 TOP2BQ02880 1626 aa30.58■■■□□ 2.49
PRICKLE3-207ENST00000611313 WRNQ14191 1432 aaPredicted RBP eCLIP30.56■■■□□ 2.48
PRICKLE3-207ENST00000611313 ARHGEF11O15085 1522 aa30.54■■■□□ 2.48
PRICKLE3-207ENST00000611313 GAPVD1Q14C86 1478 aa30.54■■■□□ 2.48
PRICKLE3-207ENST00000611313 ABCA5Q8WWZ7 1642 aa30.54■■■□□ 2.48
PRICKLE3-207ENST00000611313 PBRM1Q86U86 1689 aa30.53■■■□□ 2.48
PRICKLE3-207ENST00000611313 MAGI1Q96QZ7 1491 aaPredicted RBP30.53■■■□□ 2.48
PRICKLE3-207ENST00000611313 SYNJ2O15056 1496 aa30.44■■■□□ 2.46
PRICKLE3-207ENST00000611313 CHMP7Q8WUX9 453 aaPredicted RBP30.43■■■□□ 2.46
PRICKLE3-207ENST00000611313 CLASP1Q7Z460 1538 aa30.41■■■□□ 2.46
PRICKLE3-207ENST00000611313 ARAP1Q96P48 1450 aa30.3■■■□□ 2.44
PRICKLE3-207ENST00000611313 ADAMTS12P58397 1594 aa30.27■■■□□ 2.44
PRICKLE3-207ENST00000611313 CYB5RLQ6IPT4 315 aa30.26■■■□□ 2.43
PRICKLE3-207ENST00000611313 GRIN2AQ12879 1464 aa30.21■■■□□ 2.43
PRICKLE3-207ENST00000611313 ERICH3Q5RHP9 1530 aa30.19■■■□□ 2.42
PRICKLE3-207ENST00000611313 FHAD1B1AJZ9 1412 aa30.15■■■□□ 2.42
PRICKLE3-207ENST00000611313 CEP170Q5SW79 1584 aa30.13■■■□□ 2.41
PRICKLE3-207ENST00000611313 NUP160Q12769 1436 aa30.12■■■□□ 2.41
PRICKLE3-207ENST00000611313 ERCC6L2Q5T890 1561 aa30.02■■■□□ 2.4
PRICKLE3-207ENST00000611313 SHROOM2Q13796 1616 aa29.95■■■□□ 2.38
PRICKLE3-207ENST00000611313 IGF1RP08069 1367 aa29.94■■■□□ 2.38
PRICKLE3-207ENST00000611313 KIF27Q86VH2 1401 aa29.93■■■□□ 2.38
PRICKLE3-207ENST00000611313 RUSC2Q8N2Y8 1516 aa29.83■■■□□ 2.37
PRICKLE3-207ENST00000611313 CUL7Q14999 1698 aa29.82■■■□□ 2.36
PRICKLE3-207ENST00000611313 JPH4Q96JJ6 628 aa29.77■■■□□ 2.36
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms