RNA–Protein interactions for RNA: ENST00000478509.1

FAM50A-204, Transcript of family with sequence similarity 50 member A, humanhuman

TSL 3

Gene FAM50A, Length 682 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM50A-204ENST00000478509 NISCHQ9Y2I1 1504 aa37.28■■■■□ 3.56
FAM50A-204ENST00000478509 CCDC180Q9P1Z9 1646 aa33.31■■■□□ 2.92
FAM50A-204ENST00000478509 ABCC9O60706 1549 aa32.93■■■□□ 2.86
FAM50A-204ENST00000478509 RB1CC1Q8TDY2 1594 aa31.48■■■□□ 2.63
FAM50A-204ENST00000478509 DCAF8L2P0C7V8 631 aa31.35■■■□□ 2.61
FAM50A-204ENST00000478509 NACADO15069 1562 aa31.33■■■□□ 2.61
FAM50A-204ENST00000478509 ZCCHC6Q5VYS8 1495 aaKnown RBP31.01■■■□□ 2.56
FAM50A-204ENST00000478509 MYO15BQ96JP2 1530 aa30.96■■■□□ 2.55
FAM50A-204ENST00000478509 UNC13AQ9UPW8 1703 aa30.9■■■□□ 2.54
FAM50A-204ENST00000478509 DCAF1Q9Y4B6 1507 aa30.75■■■□□ 2.51
FAM50A-204ENST00000478509 PABPN1Q86U42 306 aaKnown RBP eCLIP30.71■■■□□ 2.51
FAM50A-204ENST00000478509 BICRAQ9NZM4 1560 aa30.56■■■□□ 2.48
FAM50A-204ENST00000478509 SCRIBQ14160 1630 aa30.48■■■□□ 2.47
FAM50A-204ENST00000478509 DNAJC5BQ9UF47 199 aa30.43■■■□□ 2.46
FAM50A-204ENST00000478509 SHROOM4Q9ULL8 1493 aa30.08■■■□□ 2.41
FAM50A-204ENST00000478509 EIF4G1Q04637 1599 aaKnown RBP29.79■■■□□ 2.36
FAM50A-204ENST00000478509 CC2D2AQ9P2K1 1620 aa29.77■■■□□ 2.36
FAM50A-204ENST00000478509 CECR2Q9BXF3 1484 aa29.58■■■□□ 2.33
FAM50A-204ENST00000478509 SMARCA4P51532 1647 aa29.05■■■□□ 2.24
FAM50A-204ENST00000478509 BAZ1AQ9NRL2 1556 aaPredicted RBP28.92■■■□□ 2.22
FAM50A-204ENST00000478509 ATAD2BQ9ULI0 1458 aa28.91■■■□□ 2.22
FAM50A-204ENST00000478509 NCAPD3P42695 1498 aa28.87■■■□□ 2.21
FAM50A-204ENST00000478509 SMARCA2P51531 1590 aa28.85■■■□□ 2.21
FAM50A-204ENST00000478509 MROH2BQ7Z745 1585 aa28.78■■■□□ 2.2
FAM50A-204ENST00000478509 HMGXB3Q12766 1538 aa28.76■■■□□ 2.19
FAM50A-204ENST00000478509 BAZ1BQ9UIG0 1483 aaKnown RBP28.7■■■□□ 2.18
FAM50A-204ENST00000478509 PEG3Q9GZU2 1588 aa28.69■■■□□ 2.18
FAM50A-204ENST00000478509 WIZO95785 1651 aa28.52■■■□□ 2.16
FAM50A-204ENST00000478509 NESP48681 1621 aa28.43■■■□□ 2.14
FAM50A-204ENST00000478509 ERCC6Q03468 1493 aa28.4■■■□□ 2.14
FAM50A-204ENST00000478509 RSF1Q96T23 1441 aaPredicted RBP28.29■■■□□ 2.12
FAM50A-204ENST00000478509 LAMC3Q9Y6N6 1575 aa28.23■■■□□ 2.11
FAM50A-204ENST00000478509 KIF21AQ7Z4S6 1674 aa28.13■■■□□ 2.09
FAM50A-204ENST00000478509 TOP2AP11388 1531 aaKnown RBP28.13■■■□□ 2.09
FAM50A-204ENST00000478509 CUX2O14529 1486 aa28.11■■■□□ 2.09
FAM50A-204ENST00000478509 THOC2Q8NI27 1593 aaKnown RBP28.05■■■□□ 2.08
FAM50A-204ENST00000478509 CADPSQ9ULU8 1353 aa28.04■■■□□ 2.08
FAM50A-204ENST00000478509 PDS5BQ9NTI5 1447 aa28.01■■■□□ 2.07
FAM50A-204ENST00000478509 CFTRP13569 1480 aa27.82■■■□□ 2.04
FAM50A-204ENST00000478509 FANCD2Q9BXW9 1451 aa27.79■■■□□ 2.04
FAM50A-204ENST00000478509 MRC2Q9UBG0 1479 aa27.79■■■□□ 2.04
FAM50A-204ENST00000478509 CEP164Q9UPV0 1460 aa27.78■■■□□ 2.04
FAM50A-204ENST00000478509 CCDC88BA6NC98 1476 aa27.77■■■□□ 2.04
FAM50A-204ENST00000478509 PRDM2Q13029 1718 aa27.73■■■□□ 2.03
FAM50A-204ENST00000478509 WDR62O43379 1518 aa27.72■■■□□ 2.03
FAM50A-204ENST00000478509 DNAJC5Q9H3Z4 198 aa27.55■■■□□ 2
FAM50A-204ENST00000478509 URB2Q14146 1524 aaKnown RBP27.54■■■□□ 2
FAM50A-204ENST00000478509 SUPT5HO00267 1087 aaKnown RBP27.44■■□□□ 1.98
FAM50A-204ENST00000478509 TOPBP1Q92547 1522 aa27.31■■□□□ 1.96
FAM50A-204ENST00000478509 DNMBPQ6XZF7 1577 aa27.26■■□□□ 1.96
FAM50A-204ENST00000478509 ABCC8Q09428 1581 aa27.19■■□□□ 1.94
FAM50A-204ENST00000478509 IFT140Q96RY7 1462 aa27.18■■□□□ 1.94
FAM50A-204ENST00000478509 ZNF608Q9ULD9 1512 aaPredicted RBP27.16■■□□□ 1.94
FAM50A-204ENST00000478509 EIF4G3O43432 1585 aaKnown RBP27.07■■□□□ 1.92
FAM50A-204ENST00000478509 POLA1P09884 1462 aaPredicted RBP27.06■■□□□ 1.92
FAM50A-204ENST00000478509 TARBP1Q13395 1621 aaKnown RBP27.04■■□□□ 1.92
FAM50A-204ENST00000478509 CUX1P39880 1505 aa27.02■■□□□ 1.92
FAM50A-204ENST00000478509 RAD54L2Q9Y4B4 1467 aa26.99■■□□□ 1.91
FAM50A-204ENST00000478509 FGD5Q6ZNL6 1462 aa26.98■■□□□ 1.91
FAM50A-204ENST00000478509 AQRO60306 1485 aaKnown RBP eCLIP26.93■■□□□ 1.92e-9■■■■■ 34.5
FAM50A-204ENST00000478509 SOGA1O94964 1423 aa26.91■■□□□ 1.9
FAM50A-204ENST00000478509 OSCARQ8IYS5 282 aa26.86■■□□□ 1.89
FAM50A-204ENST00000478509 TDRD9Q8NDG6 1382 aaKnown RBP26.84■■□□□ 1.89
FAM50A-204ENST00000478509 CHD1O14646 1710 aa26.82■■□□□ 1.88
FAM50A-204ENST00000478509 WDR97A6NE52 1622 aa26.81■■□□□ 1.88
FAM50A-204ENST00000478509 SYNJ1O43426 1573 aa26.73■■□□□ 1.87
FAM50A-204ENST00000478509 BIVM-ERCC5R4GMW8 1640 aa26.72■■□□□ 1.87
FAM50A-204ENST00000478509 SNAPC4Q5SXM2 1469 aa26.71■■□□□ 1.87
FAM50A-204ENST00000478509 WRNQ14191 1432 aaPredicted RBP eCLIP26.71■■□□□ 1.87
FAM50A-204ENST00000478509 PBRM1Q86U86 1689 aa26.7■■□□□ 1.86
FAM50A-204ENST00000478509 TOP2BQ02880 1626 aa26.69■■□□□ 1.86
FAM50A-204ENST00000478509 FBLN2P98095 1184 aa26.69■■□□□ 1.86
FAM50A-204ENST00000478509 TRIM41Q8WV44 630 aa26.68■■□□□ 1.86
FAM50A-204ENST00000478509 ABCA10Q8WWZ4 1543 aa26.65■■□□□ 1.86
FAM50A-204ENST00000478509 GRIN2BQ13224 1484 aa26.63■■□□□ 1.85
FAM50A-204ENST00000478509 ABCA5Q8WWZ7 1642 aa26.63■■□□□ 1.85
FAM50A-204ENST00000478509 GAPVD1Q14C86 1478 aa26.62■■□□□ 1.85
FAM50A-204ENST00000478509 RIMBP3CA6NJZ7 1639 aa26.61■■□□□ 1.85
FAM50A-204ENST00000478509 RIMBP3BA6NNM3 1639 aa26.61■■□□□ 1.85
FAM50A-204ENST00000478509 RIMBP3Q9UFD9 1639 aa26.61■■□□□ 1.85
FAM50A-204ENST00000478509 MAGI1Q96QZ7 1491 aaPredicted RBP26.59■■□□□ 1.85
FAM50A-204ENST00000478509 ARHGEF11O15085 1522 aa26.54■■□□□ 1.84
FAM50A-204ENST00000478509 CHMP7Q8WUX9 453 aaPredicted RBP26.51■■□□□ 1.83
FAM50A-204ENST00000478509 SYNJ2O15056 1496 aa26.5■■□□□ 1.83
FAM50A-204ENST00000478509 CLASP1Q7Z460 1538 aa26.43■■□□□ 1.82
FAM50A-204ENST00000478509 ADAMTS12P58397 1594 aa26.41■■□□□ 1.82
FAM50A-204ENST00000478509 GRIN2AQ12879 1464 aa26.32■■□□□ 1.8
FAM50A-204ENST00000478509 ERICH3Q5RHP9 1530 aa26.32■■□□□ 1.8
FAM50A-204ENST00000478509 ARAP1Q96P48 1450 aa26.31■■□□□ 1.8
FAM50A-204ENST00000478509 CYB5RLQ6IPT4 315 aa26.28■■□□□ 1.8
FAM50A-204ENST00000478509 FHAD1B1AJZ9 1412 aa26.27■■□□□ 1.8
FAM50A-204ENST00000478509 CEP170Q5SW79 1584 aa26.25■■□□□ 1.79
FAM50A-204ENST00000478509 NUP160Q12769 1436 aa26.17■■□□□ 1.78
FAM50A-204ENST00000478509 KIF27Q86VH2 1401 aa26.14■■□□□ 1.78
FAM50A-204ENST00000478509 ERCC6L2Q5T890 1561 aa26.12■■□□□ 1.77
FAM50A-204ENST00000478509 CUL7Q14999 1698 aa26.08■■□□□ 1.77
FAM50A-204ENST00000478509 SHROOM2Q13796 1616 aa26.06■■□□□ 1.76
FAM50A-204ENST00000478509 IGF1RP08069 1367 aa26.04■■□□□ 1.76
FAM50A-204ENST00000478509 RUSC2Q8N2Y8 1516 aa26.04■■□□□ 1.76
FAM50A-204ENST00000478509 PRG4Q92954 1404 aaPredicted RBP25.91■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms