RNA–Protein interactions for RNA: ENST00000640657.1

HNRNPU-230, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 5

Gene HNRNPU, Length 4,323 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-230ENST00000640657 NISCHQ9Y2I1 1504 aa8.76□□□□□ -1.01
HNRNPU-230ENST00000640657 PELP1Q8IZL8 1130 aaKnown RBP8.29□□□□□ -1.08
HNRNPU-230ENST00000640657 MYT1Q01538 1121 aa8.17□□□□□ -1.1
HNRNPU-230ENST00000640657 SUPT5HO00267 1087 aaKnown RBP8.06□□□□□ -1.12
HNRNPU-230ENST00000640657 HRCP23327 699 aa8.05□□□□□ -1.12
HNRNPU-230ENST00000640657 ZEB1P37275 1124 aaPredicted RBP8.04□□□□□ -1.12
HNRNPU-230ENST00000640657 PCGF6Q9BYE7 350 aa7.94□□□□□ -1.14
HNRNPU-230ENST00000640657 SHROOM4Q9ULL8 1493 aa7.9□□□□□ -1.15
HNRNPU-230ENST00000640657 CENPBP07199 599 aaPredicted RBP7.84□□□□□ -1.15
HNRNPU-230ENST00000640657 DCAF8L2P0C7V8 631 aa7.83□□□□□ -1.16
HNRNPU-230ENST00000640657 TRIM26Q12899 539 aaPredicted RBP7.8□□□□□ -1.16
HNRNPU-230ENST00000640657 CHIC1Q5VXU3 224 aa7.73□□□□□ -1.17
HNRNPU-230ENST00000640657 CCDC180Q9P1Z9 1646 aa7.64□□□□□ -1.19
HNRNPU-230ENST00000640657 DCAF1Q9Y4B6 1507 aa7.64□□□□□ -1.19
HNRNPU-230ENST00000640657 PPARGC1BQ86YN6 1023 aaKnown RBP7.63□□□□□ -1.19
HNRNPU-230ENST00000640657 CCER1Q8TC90 406 aaPredicted RBP7.6□□□□□ -1.19
HNRNPU-230ENST00000640657 TTBK1Q5TCY1 1321 aaPredicted RBP7.57□□□□□ -1.2
HNRNPU-230ENST00000640657 TRIM41Q8WV44 630 aa7.57□□□□□ -1.2
HNRNPU-230ENST00000640657 ACIN1Q9UKV3 1341 aaKnown RBP7.51□□□□□ -1.21
HNRNPU-230ENST00000640657 LOC105371045A0A1W2PR82 267 aa7.49□□□□□ -1.21
HNRNPU-230ENST00000640657 APLP2Q06481 763 aa7.47□□□□□ -1.21
HNRNPU-230ENST00000640657 DIEXFQ68CQ4 756 aaKnown RBP7.47□□□□□ -1.21
HNRNPU-230ENST00000640657 FAM9AQ8IZU1 332 aaPredicted RBP7.46□□□□□ -1.21
HNRNPU-230ENST00000640657 CLSPNQ9HAW4 1339 aa7.45□□□□□ -1.22
HNRNPU-230ENST00000640657 GTF3C3Q9Y5Q9 886 aa7.44□□□□□ -1.22
HNRNPU-230ENST00000640657 SCAF1Q9H7N4 1312 aaKnown RBP7.42□□□□□ -1.22
HNRNPU-230ENST00000640657 ERICH6Q7L0X2 663 aa7.4□□□□□ -1.22
HNRNPU-230ENST00000640657 EHMT2Q96KQ7 1210 aa7.39□□□□□ -1.23
HNRNPU-230ENST00000640657 ZCCHC6Q5VYS8 1495 aaKnown RBP7.39□□□□□ -1.23
HNRNPU-230ENST00000640657 NEFLP07196 543 aa7.38□□□□□ -1.23
HNRNPU-230ENST00000640657 YTHDC1Q96MU7 727 aaKnown RBP7.37□□□□□ -1.23
HNRNPU-230ENST00000640657 MYO15BQ96JP2 1530 aa7.35□□□□□ -1.23
HNRNPU-230ENST00000640657 ZNF316A6NFI3 1004 aaPredicted RBP7.35□□□□□ -1.23
HNRNPU-230ENST00000640657 AEBP2Q6ZN18 517 aaPredicted RBP7.35□□□□□ -1.23
HNRNPU-230ENST00000640657 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP7.31□□□□□ -1.24
HNRNPU-230ENST00000640657 NEUROD1Q13562 356 aa7.31□□□□□ -1.24
HNRNPU-230ENST00000640657 UBTFP17480 764 aaKnown RBP7.28□□□□□ -1.24
HNRNPU-230ENST00000640657 MYT1LQ9UL68 1186 aa7.23□□□□□ -1.25
HNRNPU-230ENST00000640657 ANP32EQ9BTT0 268 aa7.15□□□□□ -1.26
HNRNPU-230ENST00000640657 HNRNPUL2Q1KMD3 747 aaKnown RBP7.15□□□□□ -1.26
HNRNPU-230ENST00000640657 CDK11AQ9UQ88 783 aaPredicted RBP7.11□□□□□ -1.27
HNRNPU-230ENST00000640657 RTL5Q5HYW3 569 aaPredicted RBP7.09□□□□□ -1.27
HNRNPU-230ENST00000640657 MIER1Q8N108 512 aa7.09□□□□□ -1.27
HNRNPU-230ENST00000640657 EEA1Q15075 1411 aa7.08□□□□□ -1.28
HNRNPU-230ENST00000640657 CSRNP3Q8WYN3 585 aa7.08□□□□□ -1.28
HNRNPU-230ENST00000640657 ANP32CO43423 234 aa7.06□□□□□ -1.28
HNRNPU-230ENST00000640657 RSF1Q96T23 1441 aaPredicted RBP7.05□□□□□ -1.28
HNRNPU-230ENST00000640657 RB1CC1Q8TDY2 1594 aa7.04□□□□□ -1.28
HNRNPU-230ENST00000640657 TNIKQ9UKE5 1360 aa7.03□□□□□ -1.28
HNRNPU-230ENST00000640657 BCL11AQ9H165 835 aa7.02□□□□□ -1.29
HNRNPU-230ENST00000640657 FKBP8Q14318 412 aa7.01□□□□□ -1.29
HNRNPU-230ENST00000640657 SUPT16HQ9Y5B9 1047 aaKnown RBP7.01□□□□□ -1.29
HNRNPU-230ENST00000640657 BCANQ96GW7 911 aa7□□□□□ -1.29
HNRNPU-230ENST00000640657 RANGAP1P46060 587 aaPredicted RBP7□□□□□ -1.29
HNRNPU-230ENST00000640657 CEP162Q5TB80 1403 aa6.99□□□□□ -1.29
HNRNPU-230ENST00000640657 DAXXQ9UER7 740 aaPredicted RBP6.99□□□□□ -1.29
HNRNPU-230ENST00000640657 ABCC9O60706 1549 aa6.98□□□□□ -1.29
HNRNPU-230ENST00000640657 WRNQ14191 1432 aaPredicted RBP eCLIP6.98□□□□□ -1.29
HNRNPU-230ENST00000640657 GOLGA3Q08378 1498 aa6.96□□□□□ -1.29
HNRNPU-230ENST00000640657 ANP32AP39687 249 aaKnown RBP6.95□□□□□ -1.3
HNRNPU-230ENST00000640657 ERICH6BQ5W0A0 696 aa6.93□□□□□ -1.3
HNRNPU-230ENST00000640657 TSHZ2Q9NRE2 1034 aa6.93□□□□□ -1.3
HNRNPU-230ENST00000640657 ITGAEP38570 1179 aa6.93□□□□□ -1.3
HNRNPU-230ENST00000640657 SCRIBQ14160 1630 aa6.92□□□□□ -1.3
HNRNPU-230ENST00000640657 CLIP1P30622 1438 aa6.92□□□□□ -1.3
HNRNPU-230ENST00000640657 TIMELESSQ9UNS1 1208 aa6.91□□□□□ -1.3
HNRNPU-230ENST00000640657 DNAJC5Q9H3Z4 198 aa6.9□□□□□ -1.3
HNRNPU-230ENST00000640657 CCER2I3L3R5 266 aa6.9□□□□□ -1.3
HNRNPU-230ENST00000640657 ATP1B4Q9UN42 357 aaPredicted RBP6.9□□□□□ -1.3
HNRNPU-230ENST00000640657 CEP164Q9UPV0 1460 aa6.9□□□□□ -1.31
HNRNPU-230ENST00000640657 RBM19Q9Y4C8 960 aaKnown RBP6.88□□□□□ -1.31
HNRNPU-230ENST00000640657 DDX10Q13206 875 aaKnown RBP6.87□□□□□ -1.31
HNRNPU-230ENST00000640657 ZBTB47Q9UFB7 747 aaPredicted RBP6.87□□□□□ -1.31
HNRNPU-230ENST00000640657 FAM50AQ14320 339 aaKnown RBP6.86□□□□□ -1.31
HNRNPU-230ENST00000640657 PPP4R2Q9NY27 417 aa6.85□□□□□ -1.31
HNRNPU-230ENST00000640657 GLIPR1L2Q4G1C9 344 aa6.85□□□□□ -1.31
HNRNPU-230ENST00000640657 HNRNPUQ00839 825 aaKnown RBP eCLIP6.85□□□□□ -1.31
HNRNPU-230ENST00000640657 TONSLQ96HA7 1378 aa6.84□□□□□ -1.31
HNRNPU-230ENST00000640657 VPS8Q8N3P4 1428 aa6.84□□□□□ -1.31
HNRNPU-230ENST00000640657 FANCIQ9NVI1 1328 aa6.83□□□□□ -1.32
HNRNPU-230ENST00000640657 NACADO15069 1562 aa6.83□□□□□ -1.32
HNRNPU-230ENST00000640657 BAZ1AQ9NRL2 1556 aaPredicted RBP6.82□□□□□ -1.32
HNRNPU-230ENST00000640657 NOP58Q9Y2X3 529 aaKnown RBP6.81□□□□□ -1.32
HNRNPU-230ENST00000640657 PPM1GO15355 546 aaPredicted RBP6.81□□□□□ -1.32
HNRNPU-230ENST00000640657 TRIM52Q96A61 297 aa6.81□□□□□ -1.32
HNRNPU-230ENST00000640657 DDRGK1Q96HY6 314 aa6.8□□□□□ -1.32
HNRNPU-230ENST00000640657 DEKP35659 375 aaKnown RBP6.8□□□□□ -1.32
HNRNPU-230ENST00000640657 CCDC136Q96JN2 1154 aa6.79□□□□□ -1.32
HNRNPU-230ENST00000640657 BAZ1BQ9UIG0 1483 aaKnown RBP6.77□□□□□ -1.33
HNRNPU-230ENST00000640657 NBR1Q14596 966 aa6.77□□□□□ -1.33
HNRNPU-230ENST00000640657 CCNB3Q8WWL7 1395 aa6.77□□□□□ -1.33
HNRNPU-230ENST00000640657 SOGA1O94964 1423 aa6.75□□□□□ -1.33
HNRNPU-230ENST00000640657 DHX57Q6P158 1386 aaKnown RBP6.75□□□□□ -1.33
HNRNPU-230ENST00000640657 EIF4G2P78344 907 aaKnown RBP eCLIP6.74□□□□□ -1.33
HNRNPU-230ENST00000640657 MROH2BQ7Z745 1585 aa6.74□□□□□ -1.33
HNRNPU-230ENST00000640657 EIF4G1Q04637 1599 aaKnown RBP6.73□□□□□ -1.33
HNRNPU-230ENST00000640657 POLR3GLQ9BT43 218 aa6.73□□□□□ -1.33
HNRNPU-230ENST00000640657 MRS2Q9HD23 443 aa6.73□□□□□ -1.33
HNRNPU-230ENST00000640657 CECR2Q9BXF3 1484 aa6.73□□□□□ -1.33
HNRNPU-230ENST00000640657 SETD5Q9C0A6 1442 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 82.2 ms