RNA–Protein interactions for RNA: ENST00000489705.2

HNRNPU-211, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 3

Gene HNRNPU, Length 451 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-211ENST00000489705 AEBP2Q6ZN18 517 aaPredicted RBP31.08■■■□□ 2.57
HNRNPU-211ENST00000489705 CHIC1Q5VXU3 224 aa30.2■■■□□ 2.43
HNRNPU-211ENST00000489705 SENP3Q9H4L4 574 aaPredicted RBP26.64■■□□□ 1.86
HNRNPU-211ENST00000489705 PHF23Q9BUL5 403 aaPredicted RBP26.4■■□□□ 1.82
HNRNPU-211ENST00000489705 FOXD1Q16676 465 aa24.61■■□□□ 1.53
HNRNPU-211ENST00000489705 PLPPR3Q6T4P5 718 aa24.45■■□□□ 1.5
HNRNPU-211ENST00000489705 PPP6R1Q9UPN7 881 aa23.35■■□□□ 1.33
HNRNPU-211ENST00000489705 ADRA2BP18089 450 aa23.31■■□□□ 1.32
HNRNPU-211ENST00000489705 PIAS4Q8N2W9 510 aaPredicted RBP23.17■■□□□ 1.3
HNRNPU-211ENST00000489705 MSH5O43196 834 aa23■■□□□ 1.27
HNRNPU-211ENST00000489705 SCAF1Q9H7N4 1312 aaKnown RBP21.6■■□□□ 1.05
HNRNPU-211ENST00000489705 PPP4R3CPQ6ZMV5 832 aa21.41■■□□□ 1.02
HNRNPU-211ENST00000489705 POTEDQ86YR6 584 aa21.33■■□□□ 1.01
HNRNPU-211ENST00000489705 MAPK8IP2Q13387 824 aaPredicted RBP21.19■□□□□ 0.98
HNRNPU-211ENST00000489705 DMRT2Q9Y5R5 561 aa21.17■□□□□ 0.98
HNRNPU-211ENST00000489705 CNKSR2Q8WXI2 1034 aa20.97■□□□□ 0.95
HNRNPU-211ENST00000489705 NCBP3Q53F19 620 aaKnown RBP20.89■□□□□ 0.93
HNRNPU-211ENST00000489705 RNF216Q9NWF9 866 aaPredicted RBP20.65■□□□□ 0.9
HNRNPU-211ENST00000489705 HOXD11P31277 338 aaPredicted RBP20.64■□□□□ 0.89
HNRNPU-211ENST00000489705 KCNA4P22459 653 aa20.48■□□□□ 0.87
HNRNPU-211ENST00000489705 NPM3O75607 178 aaKnown RBP20.44■□□□□ 0.86
HNRNPU-211ENST00000489705 DNAJC5BQ9UF47 199 aa20.15■□□□□ 0.82
HNRNPU-211ENST00000489705 DCAF8L1A6NGE4 600 aa20.14■□□□□ 0.81
HNRNPU-211ENST00000489705 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.6■□□□□ 0.732e-6■□□□□ 11
HNRNPU-211ENST00000489705 RNF39Q9H2S5 420 aa19.59■□□□□ 0.73
HNRNPU-211ENST00000489705 SLC4A1APQ9BWU0 796 aaKnown RBP19.52■□□□□ 0.72
HNRNPU-211ENST00000489705 C1QBPQ07021 282 aaKnown RBP19.43■□□□□ 0.7
HNRNPU-211ENST00000489705 SLC4A2P04920 1241 aa19.34■□□□□ 0.69
HNRNPU-211ENST00000489705 CACNB1Q02641 598 aaPredicted RBP19.27■□□□□ 0.68
HNRNPU-211ENST00000489705 U3KPZ7 1027 aaPredicted RBP19.22■□□□□ 0.67
HNRNPU-211ENST00000489705 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.08■□□□□ 0.64
HNRNPU-211ENST00000489705 HNRNPUL2Q1KMD3 747 aaKnown RBP19.08■□□□□ 0.64
HNRNPU-211ENST00000489705 FOXD4L1Q9NU39 408 aa19.07■□□□□ 0.64
HNRNPU-211ENST00000489705 APLP2Q06481 763 aa19.01■□□□□ 0.63
HNRNPU-211ENST00000489705 MYCNP04198 464 aaPredicted RBP19■□□□□ 0.63
HNRNPU-211ENST00000489705 SAMD1Q6SPF0 538 aaPredicted RBP18.94■□□□□ 0.62
HNRNPU-211ENST00000489705 ZBTB22O15209 634 aa18.78■□□□□ 0.6
HNRNPU-211ENST00000489705 CAPN15O75808 1086 aa18.71■□□□□ 0.59
HNRNPU-211ENST00000489705 SPINK5Q9NQ38 1064 aaPredicted RBP18.7■□□□□ 0.58
HNRNPU-211ENST00000489705 ZNF219Q9P2Y4 722 aaPredicted RBP18.68■□□□□ 0.58
HNRNPU-211ENST00000489705 ATXN8OSP0DMR3 200 aa18.54■□□□□ 0.56
HNRNPU-211ENST00000489705 TRHP20396 242 aaPredicted RBP18.51■□□□□ 0.55
HNRNPU-211ENST00000489705 DSG3P32926 999 aa18.5■□□□□ 0.55
HNRNPU-211ENST00000489705 CSRNP3Q8WYN3 585 aa18.47■□□□□ 0.55
HNRNPU-211ENST00000489705 EHMT2Q96KQ7 1210 aa18.46■□□□□ 0.55
HNRNPU-211ENST00000489705 ATF5Q9Y2D1 282 aaPredicted RBP18.29■□□□□ 0.52
HNRNPU-211ENST00000489705 ABCB7O75027 752 aa18.24■□□□□ 0.51
HNRNPU-211ENST00000489705 POLA2Q14181 598 aa18.17■□□□□ 0.5
HNRNPU-211ENST00000489705 ZBTB12Q9Y330 459 aaPredicted RBP18.07■□□□□ 0.48
HNRNPU-211ENST00000489705 RBM42Q9BTD8 480 aaKnown RBP17.8■□□□□ 0.44
HNRNPU-211ENST00000489705 FBLN2P98095 1184 aa17.77■□□□□ 0.44
HNRNPU-211ENST00000489705 OSCARQ8IYS5 282 aa17.55■□□□□ 0.4
HNRNPU-211ENST00000489705 MKRN4PQ13434 485 aaPredicted RBP17.54■□□□□ 0.4
HNRNPU-211ENST00000489705 SPDYE2BA6NHP3 402 aa17.48■□□□□ 0.39
HNRNPU-211ENST00000489705 SPDYE6P0CI01 402 aa17.48■□□□□ 0.39
HNRNPU-211ENST00000489705 SPDYE2Q495Y8 402 aa17.48■□□□□ 0.39
HNRNPU-211ENST00000489705 AKT1S1Q96B36 256 aa17.45■□□□□ 0.38
HNRNPU-211ENST00000489705 ZNF692Q9BU19 519 aaPredicted RBP17.26■□□□□ 0.35
HNRNPU-211ENST00000489705 SSUH2Q9Y2M2 353 aa17.26■□□□□ 0.35
HNRNPU-211ENST00000489705 REM2Q8IYK8 340 aaPredicted RBP17.18■□□□□ 0.34
HNRNPU-211ENST00000489705 SPDYE4A6NLX3 237 aa17.07■□□□□ 0.32
HNRNPU-211ENST00000489705 CHRDL2Q6WN34 429 aa17.05■□□□□ 0.32
HNRNPU-211ENST00000489705 SPDYE1Q8NFV5 336 aaPredicted RBP17.03■□□□□ 0.32
HNRNPU-211ENST00000489705 PABPN1Q86U42 306 aaKnown RBP eCLIP17■□□□□ 0.31
HNRNPU-211ENST00000489705 PITPNM1O00562 1244 aa16.98■□□□□ 0.31
HNRNPU-211ENST00000489705 POTEHQ6S545 545 aa16.87■□□□□ 0.29
HNRNPU-211ENST00000489705 STAG3Q9UJ98 1225 aa16.83■□□□□ 0.28
HNRNPU-211ENST00000489705 CLEC11AQ9Y240 323 aa16.83■□□□□ 0.28
HNRNPU-211ENST00000489705 PROM2Q8N271 834 aa16.82■□□□□ 0.28
HNRNPU-211ENST00000489705 FXR2P51116 673 aaKnown RBP eCLIP16.78■□□□□ 0.28
HNRNPU-211ENST00000489705 FKBP8Q14318 412 aa16.73■□□□□ 0.27
HNRNPU-211ENST00000489705 PIP4P2Q8N4L2 257 aa16.73■□□□□ 0.27
HNRNPU-211ENST00000489705 PRR29P0C7W0 189 aa16.7■□□□□ 0.26
HNRNPU-211ENST00000489705 PRKAR2AP13861 404 aaKnown RBP16.55■□□□□ 0.24
HNRNPU-211ENST00000489705 FBXO3Q9UK99 471 aa16.41■□□□□ 0.22
HNRNPU-211ENST00000489705 CHADLQ6NUI6 762 aa16.38■□□□□ 0.21
HNRNPU-211ENST00000489705 CREBZFQ9NS37 354 aa16.37■□□□□ 0.21
HNRNPU-211ENST00000489705 FARP1Q9Y4F1 1045 aaPredicted RBP16.32■□□□□ 0.2
HNRNPU-211ENST00000489705 PLEKHG5O94827 1062 aa16.31■□□□□ 0.2
HNRNPU-211ENST00000489705 HAX1O00165 279 aa16.27■□□□□ 0.2
HNRNPU-211ENST00000489705 NPM1P06748 294 aaKnown RBP eCLIP16.23■□□□□ 0.19
HNRNPU-211ENST00000489705 C19orf67A6NJJ6 358 aa16.21■□□□□ 0.19
HNRNPU-211ENST00000489705 MIER1Q8N108 512 aa16.2■□□□□ 0.18
HNRNPU-211ENST00000489705 ZBTB47Q9UFB7 747 aaPredicted RBP16.19■□□□□ 0.18
HNRNPU-211ENST00000489705 MNX1P50219 401 aaPredicted RBP16.17■□□□□ 0.18
HNRNPU-211ENST00000489705 PLCD3Q8N3E9 789 aa16.17■□□□□ 0.18
HNRNPU-211ENST00000489705 SP7Q8TDD2 431 aaPredicted RBP16.1■□□□□ 0.17
HNRNPU-211ENST00000489705 CD44P16070 742 aaKnown RBP16.08■□□□□ 0.16
HNRNPU-211ENST00000489705 VASPP50552 380 aaPredicted RBP16.08■□□□□ 0.16
HNRNPU-211ENST00000489705 PAK3O75914 559 aaPredicted RBP16.04■□□□□ 0.16
HNRNPU-211ENST00000489705 CLCN6P51797 869 aa16.02■□□□□ 0.16
HNRNPU-211ENST00000489705 EVX2Q03828 476 aa15.98■□□□□ 0.15
HNRNPU-211ENST00000489705 ZNF579Q8NAF0 562 aaKnown RBP15.93■□□□□ 0.14
HNRNPU-211ENST00000489705 ZRANB1Q9UGI0 708 aa15.92■□□□□ 0.14
HNRNPU-211ENST00000489705 KLHL34Q8N239 644 aa15.84■□□□□ 0.13
HNRNPU-211ENST00000489705 NUBP1P53384 320 aa15.83■□□□□ 0.12
HNRNPU-211ENST00000489705 RASEFQ8IZ41 740 aa15.79■□□□□ 0.12
HNRNPU-211ENST00000489705 FAM212AQ96EL1 285 aa15.79■□□□□ 0.12
HNRNPU-211ENST00000489705 GABBR2O75899 941 aa15.78■□□□□ 0.12
HNRNPU-211ENST00000489705 IFNLR1Q8IU57 520 aaPredicted RBP15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms