RNA–Protein interactions for RNA: ENST00000278100.10

BCCIP-201, Transcript of BRCA2 and CDKN1A interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BCCIP, Length 1,236 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BCCIP-201ENST00000278100 AEBP2Q6ZN18 517 aaPredicted RBP29.74■■■□□ 2.35
BCCIP-201ENST00000278100 NISCHQ9Y2I1 1504 aa28.45■■■□□ 2.15
BCCIP-201ENST00000278100 CHIC1Q5VXU3 224 aa27.95■■■□□ 2.06
BCCIP-201ENST00000278100 ABCC9O60706 1549 aa25.98■■□□□ 1.75
BCCIP-201ENST00000278100 SENP3Q9H4L4 574 aaPredicted RBP25.71■■□□□ 1.71
BCCIP-201ENST00000278100 CCDC180Q9P1Z9 1646 aa25.64■■□□□ 1.7
BCCIP-201ENST00000278100 PHF23Q9BUL5 403 aaPredicted RBP25.13■■□□□ 1.61
BCCIP-201ENST00000278100 DNAJC5BQ9UF47 199 aa24.54■■□□□ 1.52
BCCIP-201ENST00000278100 RB1CC1Q8TDY2 1594 aa24.54■■□□□ 1.52
BCCIP-201ENST00000278100 POTEDQ86YR6 584 aa24.37■■□□□ 1.49
BCCIP-201ENST00000278100 NACADO15069 1562 aa24.27■■□□□ 1.48
BCCIP-201ENST00000278100 DCAF8L2P0C7V8 631 aa24.24■■□□□ 1.47
BCCIP-201ENST00000278100 PABPN1Q86U42 306 aaKnown RBP eCLIP24.15■■□□□ 1.46
BCCIP-201ENST00000278100 UNC13AQ9UPW8 1703 aa24.07■■□□□ 1.44
BCCIP-201ENST00000278100 FOXD1Q16676 465 aa24.01■■□□□ 1.43
BCCIP-201ENST00000278100 BICRAQ9NZM4 1560 aa23.85■■□□□ 1.41
BCCIP-201ENST00000278100 MYO15BQ96JP2 1530 aa23.77■■□□□ 1.4
BCCIP-201ENST00000278100 ZCCHC6Q5VYS8 1495 aaKnown RBP23.54■■□□□ 1.36
BCCIP-201ENST00000278100 SCRIBQ14160 1630 aa23.46■■□□□ 1.35
BCCIP-201ENST00000278100 CC2D2AQ9P2K1 1620 aa23.42■■□□□ 1.34
BCCIP-201ENST00000278100 DCAF1Q9Y4B6 1507 aa23.41■■□□□ 1.34
BCCIP-201ENST00000278100 SHROOM4Q9ULL8 1493 aa23.38■■□□□ 1.33
BCCIP-201ENST00000278100 CECR2Q9BXF3 1484 aa23.37■■□□□ 1.33
BCCIP-201ENST00000278100 EIF4G1Q04637 1599 aaKnown RBP23.29■■□□□ 1.32
BCCIP-201ENST00000278100 MSH5O43196 834 aa23.05■■□□□ 1.28
BCCIP-201ENST00000278100 DNAJC5Q9H3Z4 198 aa22.66■■□□□ 1.22
BCCIP-201ENST00000278100 ERCC6Q03468 1493 aa22.43■■□□□ 1.18
BCCIP-201ENST00000278100 CUX2O14529 1486 aa22.39■■□□□ 1.17
BCCIP-201ENST00000278100 NCAPD3P42695 1498 aa22.39■■□□□ 1.17
BCCIP-201ENST00000278100 ATAD2BQ9ULI0 1458 aa22.34■■□□□ 1.17
BCCIP-201ENST00000278100 SMARCA4P51532 1647 aa22.29■■□□□ 1.16
BCCIP-201ENST00000278100 SMARCA2P51531 1590 aa22.25■■□□□ 1.15
BCCIP-201ENST00000278100 NESP48681 1621 aa22.24■■□□□ 1.15
BCCIP-201ENST00000278100 HMGXB3Q12766 1538 aa22.23■■□□□ 1.15
BCCIP-201ENST00000278100 PIAS4Q8N2W9 510 aaPredicted RBP22.2■■□□□ 1.14
BCCIP-201ENST00000278100 BAZ1BQ9UIG0 1483 aaKnown RBP22.14■■□□□ 1.13
BCCIP-201ENST00000278100 BAZ1AQ9NRL2 1556 aaPredicted RBP22.1■■□□□ 1.13
BCCIP-201ENST00000278100 THOC2Q8NI27 1593 aaKnown RBP22.04■■□□□ 1.12
BCCIP-201ENST00000278100 PEG3Q9GZU2 1588 aa21.99■■□□□ 1.11
BCCIP-201ENST00000278100 MROH2BQ7Z745 1585 aa21.97■■□□□ 1.11
BCCIP-201ENST00000278100 KIF21AQ7Z4S6 1674 aa21.97■■□□□ 1.11
BCCIP-201ENST00000278100 LAMC3Q9Y6N6 1575 aa21.96■■□□□ 1.11
BCCIP-201ENST00000278100 PDS5BQ9NTI5 1447 aa21.83■■□□□ 1.09
BCCIP-201ENST00000278100 WIZO95785 1651 aa21.73■■□□□ 1.07
BCCIP-201ENST00000278100 CADPSQ9ULU8 1353 aa21.73■■□□□ 1.07
BCCIP-201ENST00000278100 MRC2Q9UBG0 1479 aa21.71■■□□□ 1.07
BCCIP-201ENST00000278100 TRIM41Q8WV44 630 aa21.7■■□□□ 1.06
BCCIP-201ENST00000278100 WDR62O43379 1518 aa21.65■■□□□ 1.06
BCCIP-201ENST00000278100 CEP164Q9UPV0 1460 aa21.58■■□□□ 1.04
BCCIP-201ENST00000278100 FANCD2Q9BXW9 1451 aa21.52■■□□□ 1.04
BCCIP-201ENST00000278100 PPP6R1Q9UPN7 881 aa21.48■■□□□ 1.03
BCCIP-201ENST00000278100 CFTRP13569 1480 aa21.42■■□□□ 1.02
BCCIP-201ENST00000278100 RSF1Q96T23 1441 aaPredicted RBP21.38■■□□□ 1.01
BCCIP-201ENST00000278100 TOP2AP11388 1531 aaKnown RBP21.38■■□□□ 1.01
BCCIP-201ENST00000278100 URB2Q14146 1524 aaKnown RBP21.38■■□□□ 1.01
BCCIP-201ENST00000278100 ADRA2BP18089 450 aa21.37■■□□□ 1.01
BCCIP-201ENST00000278100 OSCARQ8IYS5 282 aa21.33■■□□□ 1.01
BCCIP-201ENST00000278100 PLPPR3Q6T4P5 718 aa21.27■■□□□ 1
BCCIP-201ENST00000278100 PRDM2Q13029 1718 aa21.26■□□□□ 0.99
BCCIP-201ENST00000278100 ZNF608Q9ULD9 1512 aaPredicted RBP21.18■□□□□ 0.98
BCCIP-201ENST00000278100 RIMBP3CA6NJZ7 1639 aa21.17■□□□□ 0.98
BCCIP-201ENST00000278100 RIMBP3BA6NNM3 1639 aa21.17■□□□□ 0.98
BCCIP-201ENST00000278100 RIMBP3Q9UFD9 1639 aa21.17■□□□□ 0.98
BCCIP-201ENST00000278100 CCDC88BA6NC98 1476 aa21.14■□□□□ 0.98
BCCIP-201ENST00000278100 IFT140Q96RY7 1462 aa21.13■□□□□ 0.97
BCCIP-201ENST00000278100 TOPBP1Q92547 1522 aa21.09■□□□□ 0.97
BCCIP-201ENST00000278100 EIF4G3O43432 1585 aaKnown RBP21.05■□□□□ 0.96
BCCIP-201ENST00000278100 ARHGEF11O15085 1522 aa21.04■□□□□ 0.96
BCCIP-201ENST00000278100 DNMBPQ6XZF7 1577 aa20.99■□□□□ 0.95
BCCIP-201ENST00000278100 CHD1O14646 1710 aa20.98■□□□□ 0.95
BCCIP-201ENST00000278100 ABCC8Q09428 1581 aa20.95■□□□□ 0.94
BCCIP-201ENST00000278100 AQRO60306 1485 aaKnown RBP eCLIP20.94■□□□□ 0.942e-6■■□□□ 14.4
BCCIP-201ENST00000278100 SUPT5HO00267 1087 aaKnown RBP20.93■□□□□ 0.94
BCCIP-201ENST00000278100 TARBP1Q13395 1621 aaKnown RBP20.92■□□□□ 0.94
BCCIP-201ENST00000278100 CYB5RLQ6IPT4 315 aa20.91■□□□□ 0.94
BCCIP-201ENST00000278100 FBLN2P98095 1184 aa20.89■□□□□ 0.93
BCCIP-201ENST00000278100 POLA1P09884 1462 aaPredicted RBP20.86■□□□□ 0.93
BCCIP-201ENST00000278100 ARAP1Q96P48 1450 aa20.83■□□□□ 0.93
BCCIP-201ENST00000278100 RAD54L2Q9Y4B4 1467 aa20.82■□□□□ 0.92
BCCIP-201ENST00000278100 TRHP20396 242 aaPredicted RBP20.8■□□□□ 0.92
BCCIP-201ENST00000278100 TDRD9Q8NDG6 1382 aaKnown RBP20.77■□□□□ 0.92
BCCIP-201ENST00000278100 SOGA1O94964 1423 aa20.75■□□□□ 0.91
BCCIP-201ENST00000278100 SNAPC4Q5SXM2 1469 aa20.74■□□□□ 0.91
BCCIP-201ENST00000278100 FGD5Q6ZNL6 1462 aa20.71■□□□□ 0.91
BCCIP-201ENST00000278100 CUX1P39880 1505 aa20.66■□□□□ 0.9
BCCIP-201ENST00000278100 CLASP1Q7Z460 1538 aa20.65■□□□□ 0.9
BCCIP-201ENST00000278100 CHMP7Q8WUX9 453 aaPredicted RBP20.64■□□□□ 0.89
BCCIP-201ENST00000278100 SYNJ1O43426 1573 aa20.63■□□□□ 0.89
BCCIP-201ENST00000278100 WDR97A6NE52 1622 aa20.62■□□□□ 0.89
BCCIP-201ENST00000278100 MAGI1Q96QZ7 1491 aaPredicted RBP20.6■□□□□ 0.89
BCCIP-201ENST00000278100 GRIN2BQ13224 1484 aa20.59■□□□□ 0.89
BCCIP-201ENST00000278100 PBRM1Q86U86 1689 aa20.58■□□□□ 0.88
BCCIP-201ENST00000278100 SYNJ2O15056 1496 aa20.55■□□□□ 0.88
BCCIP-201ENST00000278100 GAPVD1Q14C86 1478 aa20.5■□□□□ 0.87
BCCIP-201ENST00000278100 CACNB1Q02641 598 aaPredicted RBP20.44■□□□□ 0.86
BCCIP-201ENST00000278100 ABCA5Q8WWZ7 1642 aa20.44■□□□□ 0.86
BCCIP-201ENST00000278100 ABCA10Q8WWZ4 1543 aa20.41■□□□□ 0.86
BCCIP-201ENST00000278100 ERCC6L2Q5T890 1561 aa20.38■□□□□ 0.85
BCCIP-201ENST00000278100 GRIN2AQ12879 1464 aa20.34■□□□□ 0.85
BCCIP-201ENST00000278100 ADAMTS12P58397 1594 aa20.33■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms