RNA–Protein interactions for RNA: ENST00000305218.8

STIP1-201, Transcript of stress induced phosphoprotein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene STIP1, Length 2,196 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STIP1-201ENST00000305218 NISCHQ9Y2I1 1504 aa34.66■■■■□ 3.14
STIP1-201ENST00000305218 CCDC180Q9P1Z9 1646 aa30.04■■■□□ 2.4
STIP1-201ENST00000305218 ZCCHC6Q5VYS8 1495 aaKnown RBP29.19■■■□□ 2.26
STIP1-201ENST00000305218 DCAF1Q9Y4B6 1507 aa28.66■■■□□ 2.18
STIP1-201ENST00000305218 DCAF8L2P0C7V8 631 aa28.54■■■□□ 2.16
STIP1-201ENST00000305218 SHROOM4Q9ULL8 1493 aa28.53■■■□□ 2.16
STIP1-201ENST00000305218 MYO15BQ96JP2 1530 aa28.19■■■□□ 2.1
STIP1-201ENST00000305218 ABCC9O60706 1549 aa28.15■■■□□ 2.1
STIP1-201ENST00000305218 NACADO15069 1562 aa27.92■■■□□ 2.06
STIP1-201ENST00000305218 SCRIBQ14160 1630 aa27.7■■■□□ 2.03
STIP1-201ENST00000305218 SUPT5HO00267 1087 aaKnown RBP27.62■■■□□ 2.01
STIP1-201ENST00000305218 RB1CC1Q8TDY2 1594 aa27.61■■■□□ 2.01
STIP1-201ENST00000305218 RSF1Q96T23 1441 aaPredicted RBP27.02■■□□□ 1.92
STIP1-201ENST00000305218 UNC13AQ9UPW8 1703 aa27.01■■□□□ 1.91
STIP1-201ENST00000305218 CECR2Q9BXF3 1484 aa26.9■■□□□ 1.9
STIP1-201ENST00000305218 MROH2BQ7Z745 1585 aa26.78■■□□□ 1.88
STIP1-201ENST00000305218 BAZ1AQ9NRL2 1556 aaPredicted RBP26.75■■□□□ 1.87
STIP1-201ENST00000305218 BICRAQ9NZM4 1560 aa26.75■■□□□ 1.87
STIP1-201ENST00000305218 PABPN1Q86U42 306 aaKnown RBP eCLIP26.61■■□□□ 1.854e-11■■■■■ 40
STIP1-201ENST00000305218 CHIC1Q5VXU3 224 aa26.59■■□□□ 1.85
STIP1-201ENST00000305218 WIZO95785 1651 aa26.57■■□□□ 1.84
STIP1-201ENST00000305218 SMARCA4P51532 1647 aa26.57■■□□□ 1.84
STIP1-201ENST00000305218 TOP2AP11388 1531 aaKnown RBP26.33■■□□□ 1.81
STIP1-201ENST00000305218 PEG3Q9GZU2 1588 aa26.23■■□□□ 1.79
STIP1-201ENST00000305218 SMARCA2P51531 1590 aa26.08■■□□□ 1.77
STIP1-201ENST00000305218 CCDC88BA6NC98 1476 aa26.06■■□□□ 1.76
STIP1-201ENST00000305218 ATAD2BQ9ULI0 1458 aa26.06■■□□□ 1.76
STIP1-201ENST00000305218 EIF4G1Q04637 1599 aaKnown RBP26■■□□□ 1.75
STIP1-201ENST00000305218 BAZ1BQ9UIG0 1483 aaKnown RBP25.95■■□□□ 1.74
STIP1-201ENST00000305218 TRIM41Q8WV44 630 aa25.95■■□□□ 1.74
STIP1-201ENST00000305218 HMGXB3Q12766 1538 aa25.77■■□□□ 1.72
STIP1-201ENST00000305218 NCAPD3P42695 1498 aa25.77■■□□□ 1.72
STIP1-201ENST00000305218 ABCC8Q09428 1581 aa25.62■■□□□ 1.69
STIP1-201ENST00000305218 LOC105371045A0A1W2PR82 267 aa25.58■■□□□ 1.69
STIP1-201ENST00000305218 FAM9AQ8IZU1 332 aaPredicted RBP25.48■■□□□ 1.67
STIP1-201ENST00000305218 CC2D2AQ9P2K1 1620 aa25.46■■□□□ 1.67
STIP1-201ENST00000305218 WRNQ14191 1432 aaPredicted RBP eCLIP25.44■■□□□ 1.666e-7■■■■■ 33.4
STIP1-201ENST00000305218 CFTRP13569 1480 aa25.3■■□□□ 1.64
STIP1-201ENST00000305218 SYNJ1O43426 1573 aa25.3■■□□□ 1.64
STIP1-201ENST00000305218 EEA1Q15075 1411 aa25.26■■□□□ 1.63
STIP1-201ENST00000305218 SOGA1O94964 1423 aa25.22■■□□□ 1.63
STIP1-201ENST00000305218 TOP2BQ02880 1626 aa25.18■■□□□ 1.62
STIP1-201ENST00000305218 CADPSQ9ULU8 1353 aa25.15■■□□□ 1.62
STIP1-201ENST00000305218 PRDM2Q13029 1718 aa25.14■■□□□ 1.62
STIP1-201ENST00000305218 BIVM-ERCC5R4GMW8 1640 aa25.13■■□□□ 1.61
STIP1-201ENST00000305218 EHMT2Q96KQ7 1210 aa25.11■■□□□ 1.61
STIP1-201ENST00000305218 RUSC2Q8N2Y8 1516 aa25.08■■□□□ 1.61
STIP1-201ENST00000305218 CSRNP3Q8WYN3 585 aa25.07■■□□□ 1.6
STIP1-201ENST00000305218 CUX1P39880 1505 aa25.02■■□□□ 1.6
STIP1-201ENST00000305218 GOLGA3Q08378 1498 aa24.93■■□□□ 1.58
STIP1-201ENST00000305218 TNIKQ9UKE5 1360 aa24.9■■□□□ 1.58
STIP1-201ENST00000305218 CEP164Q9UPV0 1460 aa24.9■■□□□ 1.58
STIP1-201ENST00000305218 KIF21BO75037 1637 aa24.89■■□□□ 1.58
STIP1-201ENST00000305218 FANCD2Q9BXW9 1451 aa24.88■■□□□ 1.57
STIP1-201ENST00000305218 LAMC3Q9Y6N6 1575 aa24.84■■□□□ 1.57
STIP1-201ENST00000305218 NESP48681 1621 aa24.8■■□□□ 1.56
STIP1-201ENST00000305218 CEP162Q5TB80 1403 aa24.8■■□□□ 1.56
STIP1-201ENST00000305218 UBTFP17480 764 aaKnown RBP24.8■■□□□ 1.56
STIP1-201ENST00000305218 PCGF6Q9BYE7 350 aa24.79■■□□□ 1.56
STIP1-201ENST00000305218 KIF27Q86VH2 1401 aa24.77■■□□□ 1.56
STIP1-201ENST00000305218 FGD5Q6ZNL6 1462 aa24.71■■□□□ 1.55
STIP1-201ENST00000305218 TRIM26Q12899 539 aaPredicted RBP24.71■■□□□ 1.55
STIP1-201ENST00000305218 DNMBPQ6XZF7 1577 aa24.71■■□□□ 1.55
STIP1-201ENST00000305218 RAPGEF2Q9Y4G8 1499 aa24.7■■□□□ 1.54
STIP1-201ENST00000305218 DNAJC5BQ9UF47 199 aa24.7■■□□□ 1.54
STIP1-201ENST00000305218 ERICH3Q5RHP9 1530 aa24.68■■□□□ 1.54
STIP1-201ENST00000305218 PRXQ9BXM0 1461 aa24.67■■□□□ 1.54
STIP1-201ENST00000305218 PDS5BQ9NTI5 1447 aa24.66■■□□□ 1.54
STIP1-201ENST00000305218 TOPBP1Q92547 1522 aa24.63■■□□□ 1.53
STIP1-201ENST00000305218 CUX2O14529 1486 aa24.63■■□□□ 1.53
STIP1-201ENST00000305218 POLA1P09884 1462 aaPredicted RBP24.55■■□□□ 1.52
STIP1-201ENST00000305218 CLIP1P30622 1438 aa24.54■■□□□ 1.52
STIP1-201ENST00000305218 URB2Q14146 1524 aaKnown RBP24.53■■□□□ 1.52
STIP1-201ENST00000305218 ABCA10Q8WWZ4 1543 aa24.5■■□□□ 1.51
STIP1-201ENST00000305218 IGF1RP08069 1367 aa24.49■■□□□ 1.51
STIP1-201ENST00000305218 KIF21AQ7Z4S6 1674 aa24.49■■□□□ 1.51
STIP1-201ENST00000305218 RAD54L2Q9Y4B4 1467 aa24.46■■□□□ 1.51
STIP1-201ENST00000305218 CARMIL1Q5VZK9 1371 aa24.39■■□□□ 1.5
STIP1-201ENST00000305218 VPS8Q8N3P4 1428 aa24.37■■□□□ 1.49
STIP1-201ENST00000305218 PPARGC1BQ86YN6 1023 aaKnown RBP24.36■■□□□ 1.49
STIP1-201ENST00000305218 WDR97A6NE52 1622 aa24.36■■□□□ 1.49
STIP1-201ENST00000305218 HRCP23327 699 aa24.35■■□□□ 1.49
STIP1-201ENST00000305218 MRC2Q9UBG0 1479 aa24.32■■□□□ 1.48
STIP1-201ENST00000305218 RANGAP1P46060 587 aaPredicted RBP24.3■■□□□ 1.48
STIP1-201ENST00000305218 CUL7Q14999 1698 aa24.28■■□□□ 1.48
STIP1-201ENST00000305218 ABCA5Q8WWZ7 1642 aa24.26■■□□□ 1.47
STIP1-201ENST00000305218 ARAP1Q96P48 1450 aa24.24■■□□□ 1.47
STIP1-201ENST00000305218 TARBP1Q13395 1621 aaKnown RBP24.22■■□□□ 1.47
STIP1-201ENST00000305218 GAPVD1Q14C86 1478 aa24.21■■□□□ 1.47
STIP1-201ENST00000305218 TDRD9Q8NDG6 1382 aaKnown RBP24.21■■□□□ 1.47
STIP1-201ENST00000305218 WDR62O43379 1518 aa24.17■■□□□ 1.46
STIP1-201ENST00000305218 ARHGAP35Q9NRY4 1499 aa24.17■■□□□ 1.46
STIP1-201ENST00000305218 APLP2Q06481 763 aa24.16■■□□□ 1.46
STIP1-201ENST00000305218 TTBK1Q5TCY1 1321 aaPredicted RBP24.13■■□□□ 1.45
STIP1-201ENST00000305218 ERCC6Q03468 1493 aa24.13■■□□□ 1.45
STIP1-201ENST00000305218 IFT140Q96RY7 1462 aa24.08■■□□□ 1.45
STIP1-201ENST00000305218 CTTNBP2Q8WZ74 1663 aa24.04■■□□□ 1.44
STIP1-201ENST00000305218 PBRM1Q86U86 1689 aa24.02■■□□□ 1.44
STIP1-201ENST00000305218 THOC2Q8NI27 1593 aaKnown RBP24.01■■□□□ 1.43
STIP1-201ENST00000305218 EFCAB5A4FU69 1503 aa24■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms