Protein–RNA interactions for Protein: Q9Y5X4

NR2E3, Photoreceptor-specific nuclear receptor, humanhuman

Predictions only

Length 410 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR2E3Q9Y5X4 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC27.88■■■□□ 2.05
NR2E3Q9Y5X4 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC27.87■■■□□ 2.05
NR2E3Q9Y5X4 AC239859.2-201ENST00000444165 318 ntBASIC27.87■■■□□ 2.05
NR2E3Q9Y5X4 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC27.87■■■□□ 2.05
NR2E3Q9Y5X4 RAP2CP1-202ENST00000605179 643 ntBASIC27.87■■■□□ 2.05
NR2E3Q9Y5X4 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC27.86■■■□□ 2.05
NR2E3Q9Y5X4 MIR638-201ENST00000385237 100 ntBASIC27.86■■■□□ 2.05
NR2E3Q9Y5X4 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC27.86■■■□□ 2.05
NR2E3Q9Y5X4 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC27.85■■■□□ 2.05
NR2E3Q9Y5X4 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC27.85■■■□□ 2.05
NR2E3Q9Y5X4 RNF146-205ENST00000477776 762 ntTSL 3 BASIC27.85■■■□□ 2.05
NR2E3Q9Y5X4 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC27.85■■■□□ 2.05
NR2E3Q9Y5X4 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC27.85■■■□□ 2.05
NR2E3Q9Y5X4 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC27.84■■■□□ 2.05
NR2E3Q9Y5X4 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC27.84■■■□□ 2.05
NR2E3Q9Y5X4 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC27.83■■■□□ 2.05
NR2E3Q9Y5X4 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC27.83■■■□□ 2.05
NR2E3Q9Y5X4 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC27.83■■■□□ 2.05
NR2E3Q9Y5X4 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC27.83■■■□□ 2.05
NR2E3Q9Y5X4 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC27.82■■■□□ 2.04
NR2E3Q9Y5X4 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC27.82■■■□□ 2.04
NR2E3Q9Y5X4 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC27.82■■■□□ 2.04
NR2E3Q9Y5X4 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC27.82■■■□□ 2.04
NR2E3Q9Y5X4 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC27.82■■■□□ 2.04
NR2E3Q9Y5X4 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC27.81■■■□□ 2.04
NR2E3Q9Y5X4 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC27.81■■■□□ 2.04
NR2E3Q9Y5X4 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC27.81■■■□□ 2.04
NR2E3Q9Y5X4 IDNK-201ENST00000376417 511 ntTSL 5 BASIC27.81■■■□□ 2.04
NR2E3Q9Y5X4 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
NR2E3Q9Y5X4 GRAMD4P7-201ENST00000578182 1232 ntBASIC27.81■■■□□ 2.04
NR2E3Q9Y5X4 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
NR2E3Q9Y5X4 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC27.8■■■□□ 2.04
NR2E3Q9Y5X4 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC27.8■■■□□ 2.04
NR2E3Q9Y5X4 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC27.8■■■□□ 2.04
NR2E3Q9Y5X4 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
NR2E3Q9Y5X4 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC27.78■■■□□ 2.04
NR2E3Q9Y5X4 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC27.78■■■□□ 2.04
NR2E3Q9Y5X4 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC27.77■■■□□ 2.04
NR2E3Q9Y5X4 Z92544.1-202ENST00000571933 1220 ntBASIC27.77■■■□□ 2.04
NR2E3Q9Y5X4 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC27.77■■■□□ 2.04
NR2E3Q9Y5X4 AL359258.2-201ENST00000564063 1566 ntBASIC27.77■■■□□ 2.04
NR2E3Q9Y5X4 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC27.76■■■□□ 2.03
NR2E3Q9Y5X4 MTX2-204ENST00000443241 799 ntTSL 3 BASIC27.76■■■□□ 2.03
NR2E3Q9Y5X4 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC27.76■■■□□ 2.03
NR2E3Q9Y5X4 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC27.76■■■□□ 2.03
NR2E3Q9Y5X4 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.03
NR2E3Q9Y5X4 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC27.75■■■□□ 2.03
NR2E3Q9Y5X4 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
NR2E3Q9Y5X4 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
NR2E3Q9Y5X4 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC27.74■■■□□ 2.03
NR2E3Q9Y5X4 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
NR2E3Q9Y5X4 MEST-211ENST00000437945 1455 ntTSL 5 BASIC27.74■■■□□ 2.03
NR2E3Q9Y5X4 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC27.74■■■□□ 2.03
NR2E3Q9Y5X4 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
NR2E3Q9Y5X4 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC27.74■■■□□ 2.03
NR2E3Q9Y5X4 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC27.73■■■□□ 2.03
NR2E3Q9Y5X4 RALB-208ENST00000631312 311 ntTSL 5 BASIC27.73■■■□□ 2.03
NR2E3Q9Y5X4 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC27.73■■■□□ 2.03
NR2E3Q9Y5X4 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC27.72■■■□□ 2.03
NR2E3Q9Y5X4 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC27.72■■■□□ 2.03
NR2E3Q9Y5X4 CREM-229ENST00000474362 1030 ntTSL 2 BASIC27.72■■■□□ 2.03
NR2E3Q9Y5X4 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC27.72■■■□□ 2.03
NR2E3Q9Y5X4 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC27.71■■■□□ 2.03
NR2E3Q9Y5X4 IDNK-203ENST00000405990 629 ntTSL 2 BASIC27.7■■■□□ 2.02
NR2E3Q9Y5X4 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC27.7■■■□□ 2.02
NR2E3Q9Y5X4 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC27.7■■■□□ 2.02
NR2E3Q9Y5X4 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC27.7■■■□□ 2.02
NR2E3Q9Y5X4 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC27.69■■■□□ 2.02
NR2E3Q9Y5X4 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC27.69■■■□□ 2.02
NR2E3Q9Y5X4 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC27.69■■■□□ 2.02
NR2E3Q9Y5X4 AL139246.5-201ENST00000606645 996 ntBASIC27.69■■■□□ 2.02
NR2E3Q9Y5X4 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC27.69■■■□□ 2.02
NR2E3Q9Y5X4 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC27.68■■■□□ 2.02
NR2E3Q9Y5X4 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC27.68■■■□□ 2.02
NR2E3Q9Y5X4 TK2-216ENST00000564917 1156 ntTSL 3 BASIC27.68■■■□□ 2.02
NR2E3Q9Y5X4 MIR3960-201ENST00000583311 91 ntBASIC27.68■■■□□ 2.02
NR2E3Q9Y5X4 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC27.68■■■□□ 2.02
NR2E3Q9Y5X4 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
NR2E3Q9Y5X4 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC27.67■■■□□ 2.02
NR2E3Q9Y5X4 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC27.66■■■□□ 2.02
NR2E3Q9Y5X4 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC27.65■■■□□ 2.02
NR2E3Q9Y5X4 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC27.65■■■□□ 2.02
NR2E3Q9Y5X4 PFN2-211ENST00000489155 636 ntTSL 4 BASIC27.65■■■□□ 2.02
NR2E3Q9Y5X4 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC27.65■■■□□ 2.02
NR2E3Q9Y5X4 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC27.65■■■□□ 2.02
NR2E3Q9Y5X4 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC27.65■■■□□ 2.02
NR2E3Q9Y5X4 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC27.64■■■□□ 2.02
NR2E3Q9Y5X4 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC27.64■■■□□ 2.02
NR2E3Q9Y5X4 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC27.64■■■□□ 2.02
NR2E3Q9Y5X4 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC27.64■■■□□ 2.01
NR2E3Q9Y5X4 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC27.63■■■□□ 2.01
NR2E3Q9Y5X4 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC27.63■■■□□ 2.01
NR2E3Q9Y5X4 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC27.63■■■□□ 2.01
NR2E3Q9Y5X4 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC27.62■■■□□ 2.01
NR2E3Q9Y5X4 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC27.62■■■□□ 2.01
NR2E3Q9Y5X4 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC27.62■■■□□ 2.01
NR2E3Q9Y5X4 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC27.62■■■□□ 2.01
NR2E3Q9Y5X4 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC27.62■■■□□ 2.01
NR2E3Q9Y5X4 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC27.62■■■□□ 2.01
NR2E3Q9Y5X4 NALT1-201ENST00000429224 738 ntTSL 5 BASIC27.62■■■□□ 2.01
Retrieved 100 of 98,524 protein–RNA pairs in 121.1 ms