Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
BRF2Q9HAW0 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC23.72■■□□□ 1.39
BRF2Q9HAW0 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
BRF2Q9HAW0 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC23.71■■□□□ 1.39
BRF2Q9HAW0 MIR219A2-201ENST00000608502 1504 ntBASIC23.71■■□□□ 1.39
BRF2Q9HAW0 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
BRF2Q9HAW0 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
BRF2Q9HAW0 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC23.71■■□□□ 1.39
BRF2Q9HAW0 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC23.71■■□□□ 1.39
BRF2Q9HAW0 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.39
BRF2Q9HAW0 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC23.7■■□□□ 1.38
BRF2Q9HAW0 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
BRF2Q9HAW0 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC23.7■■□□□ 1.38
BRF2Q9HAW0 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC23.7■■□□□ 1.38
BRF2Q9HAW0 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC23.7■■□□□ 1.38
BRF2Q9HAW0 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC23.69■■□□□ 1.38
BRF2Q9HAW0 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC23.69■■□□□ 1.38
BRF2Q9HAW0 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
BRF2Q9HAW0 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC23.68■■□□□ 1.38
BRF2Q9HAW0 CHST11-203ENST00000547956 936 ntTSL 2 BASIC23.68■■□□□ 1.38
BRF2Q9HAW0 CR559946.2-201ENST00000623684 991 ntBASIC23.68■■□□□ 1.38
BRF2Q9HAW0 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC23.68■■□□□ 1.38
BRF2Q9HAW0 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC23.67■■□□□ 1.38
BRF2Q9HAW0 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
BRF2Q9HAW0 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC23.67■■□□□ 1.38
BRF2Q9HAW0 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC23.67■■□□□ 1.38
BRF2Q9HAW0 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC23.67■■□□□ 1.38
BRF2Q9HAW0 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC23.66■■□□□ 1.38
BRF2Q9HAW0 MACF1-219ENST00000484793 834 ntTSL 2 BASIC23.66■■□□□ 1.38
BRF2Q9HAW0 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC23.66■■□□□ 1.38
BRF2Q9HAW0 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC23.66■■□□□ 1.38
BRF2Q9HAW0 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC23.66■■□□□ 1.38
BRF2Q9HAW0 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
BRF2Q9HAW0 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC23.66■■□□□ 1.38
BRF2Q9HAW0 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
BRF2Q9HAW0 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC23.65■■□□□ 1.38
BRF2Q9HAW0 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
BRF2Q9HAW0 HLA-V-202ENST00000446817 847 ntBASIC23.65■■□□□ 1.38
BRF2Q9HAW0 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC23.65■■□□□ 1.38
BRF2Q9HAW0 AC091060.1-201ENST00000623524 1766 ntBASIC23.65■■□□□ 1.38
BRF2Q9HAW0 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC23.65■■□□□ 1.38
BRF2Q9HAW0 SHF-207ENST00000560540 2062 ntTSL 5 BASIC23.64■■□□□ 1.38
BRF2Q9HAW0 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC23.64■■□□□ 1.38
BRF2Q9HAW0 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
BRF2Q9HAW0 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC23.64■■□□□ 1.37
BRF2Q9HAW0 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC23.64■■□□□ 1.37
BRF2Q9HAW0 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
BRF2Q9HAW0 MIR3648-2-201ENST00000581792 180 ntBASIC23.63■■□□□ 1.37
BRF2Q9HAW0 MIR3648-1-201ENST00000615959 180 ntBASIC23.63■■□□□ 1.37
BRF2Q9HAW0 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
BRF2Q9HAW0 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC23.62■■□□□ 1.37
BRF2Q9HAW0 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
BRF2Q9HAW0 GDI1-215ENST00000630693 786 ntTSL 4 BASIC23.62■■□□□ 1.37
BRF2Q9HAW0 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC23.62■■□□□ 1.37
BRF2Q9HAW0 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC23.61■■□□□ 1.37
BRF2Q9HAW0 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
BRF2Q9HAW0 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
BRF2Q9HAW0 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
BRF2Q9HAW0 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
BRF2Q9HAW0 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC23.6■■□□□ 1.37
BRF2Q9HAW0 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
BRF2Q9HAW0 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC23.6■■□□□ 1.37
BRF2Q9HAW0 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
BRF2Q9HAW0 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
BRF2Q9HAW0 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
BRF2Q9HAW0 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC23.6■■□□□ 1.37
BRF2Q9HAW0 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
BRF2Q9HAW0 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
BRF2Q9HAW0 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC23.59■■□□□ 1.37
BRF2Q9HAW0 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC23.59■■□□□ 1.37
BRF2Q9HAW0 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
BRF2Q9HAW0 AC145676.1-201ENST00000514988 2004 ntBASIC23.59■■□□□ 1.37
BRF2Q9HAW0 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
BRF2Q9HAW0 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
BRF2Q9HAW0 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC23.58■■□□□ 1.37
BRF2Q9HAW0 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
BRF2Q9HAW0 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC23.58■■□□□ 1.37
BRF2Q9HAW0 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC23.58■■□□□ 1.37
BRF2Q9HAW0 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC23.57■■□□□ 1.36
BRF2Q9HAW0 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC23.57■■□□□ 1.36
BRF2Q9HAW0 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC23.57■■□□□ 1.36
BRF2Q9HAW0 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
BRF2Q9HAW0 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
BRF2Q9HAW0 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
BRF2Q9HAW0 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
BRF2Q9HAW0 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
BRF2Q9HAW0 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC23.56■■□□□ 1.36
BRF2Q9HAW0 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
BRF2Q9HAW0 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
BRF2Q9HAW0 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC23.55■■□□□ 1.36
BRF2Q9HAW0 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC23.55■■□□□ 1.36
BRF2Q9HAW0 AC092803.2-201ENST00000564287 1899 ntBASIC23.55■■□□□ 1.36
BRF2Q9HAW0 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
BRF2Q9HAW0 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
BRF2Q9HAW0 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC23.54■■□□□ 1.36
BRF2Q9HAW0 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
BRF2Q9HAW0 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC23.54■■□□□ 1.36
BRF2Q9HAW0 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC23.54■■□□□ 1.36
BRF2Q9HAW0 AC016575.1-201ENST00000607026 382 ntBASIC23.54■■□□□ 1.36
BRF2Q9HAW0 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Retrieved 100 of 98,524 protein–RNA pairs in 14.4 ms