Protein–RNA interactions for Protein: Q9H3M0

KCNF1, Potassium voltage-gated channel subfamily F member 1, humanhuman

Predictions only

Length 494 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNF1Q9H3M0 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
KCNF1Q9H3M0 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC27.09■■□□□ 1.93
KCNF1Q9H3M0 DENR-202ENST00000455982 1052 ntTSL 5 BASIC27.09■■□□□ 1.93
KCNF1Q9H3M0 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC27.09■■□□□ 1.93
KCNF1Q9H3M0 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
KCNF1Q9H3M0 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC27.09■■□□□ 1.93
KCNF1Q9H3M0 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
KCNF1Q9H3M0 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
KCNF1Q9H3M0 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC27.09■■□□□ 1.93
KCNF1Q9H3M0 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
KCNF1Q9H3M0 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC27.08■■□□□ 1.93
KCNF1Q9H3M0 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC27.08■■□□□ 1.93
KCNF1Q9H3M0 AC133561.1-201ENST00000568600 2415 ntBASIC27.08■■□□□ 1.93
KCNF1Q9H3M0 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC27.08■■□□□ 1.92
KCNF1Q9H3M0 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC27.07■■□□□ 1.92
KCNF1Q9H3M0 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
KCNF1Q9H3M0 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC27.07■■□□□ 1.92
KCNF1Q9H3M0 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC27.07■■□□□ 1.92
KCNF1Q9H3M0 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC27.06■■□□□ 1.92
KCNF1Q9H3M0 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
KCNF1Q9H3M0 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
KCNF1Q9H3M0 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
KCNF1Q9H3M0 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC27.05■■□□□ 1.92
KCNF1Q9H3M0 WHAMMP2-203ENST00000563942 1603 ntBASIC27.04■■□□□ 1.92
KCNF1Q9H3M0 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC27.04■■□□□ 1.92
KCNF1Q9H3M0 AC142381.3-201ENST00000568208 1670 ntBASIC27.04■■□□□ 1.92
KCNF1Q9H3M0 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC27.04■■□□□ 1.92
KCNF1Q9H3M0 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC27.04■■□□□ 1.92
KCNF1Q9H3M0 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
KCNF1Q9H3M0 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC27.03■■□□□ 1.92
KCNF1Q9H3M0 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC27.03■■□□□ 1.92
KCNF1Q9H3M0 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC27.03■■□□□ 1.92
KCNF1Q9H3M0 AL139125.2-201ENST00000623134 1869 ntBASIC27.03■■□□□ 1.92
KCNF1Q9H3M0 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
KCNF1Q9H3M0 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
KCNF1Q9H3M0 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC27.02■■□□□ 1.92
KCNF1Q9H3M0 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC27.02■■□□□ 1.92
KCNF1Q9H3M0 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
KCNF1Q9H3M0 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC27.02■■□□□ 1.92
KCNF1Q9H3M0 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
KCNF1Q9H3M0 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC27.02■■□□□ 1.92
KCNF1Q9H3M0 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
KCNF1Q9H3M0 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC27.01■■□□□ 1.91
KCNF1Q9H3M0 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC27.01■■□□□ 1.91
KCNF1Q9H3M0 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
KCNF1Q9H3M0 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC27.01■■□□□ 1.91
KCNF1Q9H3M0 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC27■■□□□ 1.91
KCNF1Q9H3M0 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC27■■□□□ 1.91
KCNF1Q9H3M0 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
KCNF1Q9H3M0 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC27■■□□□ 1.91
KCNF1Q9H3M0 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
KCNF1Q9H3M0 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC27■■□□□ 1.91
KCNF1Q9H3M0 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
KCNF1Q9H3M0 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
KCNF1Q9H3M0 AC138932.3-201ENST00000567634 1902 ntBASIC26.99■■□□□ 1.91
KCNF1Q9H3M0 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC26.99■■□□□ 1.91
KCNF1Q9H3M0 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
KCNF1Q9H3M0 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC26.99■■□□□ 1.91
KCNF1Q9H3M0 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC26.99■■□□□ 1.91
KCNF1Q9H3M0 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
KCNF1Q9H3M0 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC26.98■■□□□ 1.91
KCNF1Q9H3M0 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC26.98■■□□□ 1.91
KCNF1Q9H3M0 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
KCNF1Q9H3M0 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC26.98■■□□□ 1.91
KCNF1Q9H3M0 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC26.98■■□□□ 1.91
KCNF1Q9H3M0 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC26.98■■□□□ 1.91
KCNF1Q9H3M0 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
KCNF1Q9H3M0 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC26.98■■□□□ 1.91
KCNF1Q9H3M0 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
KCNF1Q9H3M0 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC26.97■■□□□ 1.91
KCNF1Q9H3M0 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC26.97■■□□□ 1.91
KCNF1Q9H3M0 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC26.97■■□□□ 1.91
KCNF1Q9H3M0 AC142472.1-201ENST00000612013 1741 ntBASIC26.96■■□□□ 1.91
KCNF1Q9H3M0 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC26.96■■□□□ 1.91
KCNF1Q9H3M0 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
KCNF1Q9H3M0 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.91
KCNF1Q9H3M0 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
KCNF1Q9H3M0 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
KCNF1Q9H3M0 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
KCNF1Q9H3M0 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC26.93■■□□□ 1.9
KCNF1Q9H3M0 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC26.93■■□□□ 1.9
KCNF1Q9H3M0 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC26.93■■□□□ 1.9
KCNF1Q9H3M0 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC26.93■■□□□ 1.9
KCNF1Q9H3M0 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
KCNF1Q9H3M0 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
KCNF1Q9H3M0 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC26.93■■□□□ 1.9
KCNF1Q9H3M0 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC26.93■■□□□ 1.9
KCNF1Q9H3M0 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC26.92■■□□□ 1.9
KCNF1Q9H3M0 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
KCNF1Q9H3M0 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC26.92■■□□□ 1.9
KCNF1Q9H3M0 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC26.92■■□□□ 1.9
KCNF1Q9H3M0 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
KCNF1Q9H3M0 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC26.92■■□□□ 1.9
KCNF1Q9H3M0 AC010501.1-201ENST00000606270 1962 ntBASIC26.91■■□□□ 1.9
KCNF1Q9H3M0 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
KCNF1Q9H3M0 AC022211.4-201ENST00000625094 2161 ntBASIC26.91■■□□□ 1.9
KCNF1Q9H3M0 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
KCNF1Q9H3M0 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC26.91■■□□□ 1.9
KCNF1Q9H3M0 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC26.9■■□□□ 1.9
KCNF1Q9H3M0 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC26.9■■□□□ 1.9
Retrieved 100 of 98,524 protein–RNA pairs in 70 ms