Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
AP1S3Q96PC3 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
AP1S3Q96PC3 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
AP1S3Q96PC3 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC18.52■□□□□ 0.56
AP1S3Q96PC3 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
AP1S3Q96PC3 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
AP1S3Q96PC3 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
AP1S3Q96PC3 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC18.52■□□□□ 0.55
AP1S3Q96PC3 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
AP1S3Q96PC3 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC18.51■□□□□ 0.55
AP1S3Q96PC3 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
AP1S3Q96PC3 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
AP1S3Q96PC3 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
AP1S3Q96PC3 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
AP1S3Q96PC3 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
AP1S3Q96PC3 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
AP1S3Q96PC3 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
AP1S3Q96PC3 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
AP1S3Q96PC3 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
AP1S3Q96PC3 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
AP1S3Q96PC3 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
AP1S3Q96PC3 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
AP1S3Q96PC3 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC18.5■□□□□ 0.55
AP1S3Q96PC3 AC138932.1-201ENST00000534164 6830 ntBASIC18.49■□□□□ 0.55
AP1S3Q96PC3 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
AP1S3Q96PC3 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
AP1S3Q96PC3 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
AP1S3Q96PC3 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC18.49■□□□□ 0.55
AP1S3Q96PC3 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
AP1S3Q96PC3 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
AP1S3Q96PC3 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
AP1S3Q96PC3 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
AP1S3Q96PC3 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC18.47■□□□□ 0.55
AP1S3Q96PC3 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
AP1S3Q96PC3 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
AP1S3Q96PC3 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
AP1S3Q96PC3 RARRES2P7-201ENST00000567349 469 ntBASIC18.47■□□□□ 0.55
AP1S3Q96PC3 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC18.47■□□□□ 0.55
AP1S3Q96PC3 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
AP1S3Q96PC3 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
AP1S3Q96PC3 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
AP1S3Q96PC3 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
AP1S3Q96PC3 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
AP1S3Q96PC3 DENR-202ENST00000455982 1052 ntTSL 5 BASIC18.46■□□□□ 0.55
AP1S3Q96PC3 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC18.46■□□□□ 0.55
AP1S3Q96PC3 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
AP1S3Q96PC3 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.54
AP1S3Q96PC3 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
AP1S3Q96PC3 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
AP1S3Q96PC3 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
AP1S3Q96PC3 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC18.44■□□□□ 0.54
AP1S3Q96PC3 SETD8P1-201ENST00000623146 1180 ntBASIC18.44■□□□□ 0.54
AP1S3Q96PC3 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC18.44■□□□□ 0.54
AP1S3Q96PC3 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC18.44■□□□□ 0.54
AP1S3Q96PC3 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
AP1S3Q96PC3 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
AP1S3Q96PC3 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
AP1S3Q96PC3 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
AP1S3Q96PC3 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
AP1S3Q96PC3 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC18.43■□□□□ 0.54
AP1S3Q96PC3 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
AP1S3Q96PC3 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
AP1S3Q96PC3 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC18.43■□□□□ 0.54
AP1S3Q96PC3 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
AP1S3Q96PC3 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
AP1S3Q96PC3 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
AP1S3Q96PC3 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
AP1S3Q96PC3 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
AP1S3Q96PC3 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC18.42■□□□□ 0.54
AP1S3Q96PC3 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
AP1S3Q96PC3 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC18.41■□□□□ 0.54
AP1S3Q96PC3 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
AP1S3Q96PC3 AC100797.4-201ENST00000631653 1827 ntBASIC18.41■□□□□ 0.54
AP1S3Q96PC3 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
AP1S3Q96PC3 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
AP1S3Q96PC3 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
AP1S3Q96PC3 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
AP1S3Q96PC3 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC18.41■□□□□ 0.54
AP1S3Q96PC3 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC18.4■□□□□ 0.54
AP1S3Q96PC3 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
AP1S3Q96PC3 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
AP1S3Q96PC3 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
AP1S3Q96PC3 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC18.4■□□□□ 0.54
AP1S3Q96PC3 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
AP1S3Q96PC3 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
AP1S3Q96PC3 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC18.4■□□□□ 0.54
AP1S3Q96PC3 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC18.39■□□□□ 0.54
AP1S3Q96PC3 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC18.39■□□□□ 0.53
AP1S3Q96PC3 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC18.39■□□□□ 0.53
AP1S3Q96PC3 EBPL-202ENST00000378268 680 ntTSL 3 BASIC18.39■□□□□ 0.53
AP1S3Q96PC3 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
AP1S3Q96PC3 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
AP1S3Q96PC3 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
AP1S3Q96PC3 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC18.38■□□□□ 0.53
AP1S3Q96PC3 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
AP1S3Q96PC3 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
AP1S3Q96PC3 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
AP1S3Q96PC3 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
AP1S3Q96PC3 AP002414.2-202ENST00000590929 1450 ntBASIC18.38■□□□□ 0.53
AP1S3Q96PC3 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms