Protein–RNA interactions for Protein: Q96JI7

SPG11, Spatacsin, humanhuman

Predictions only

Length 2,443 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11Q96JI7 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
SPG11Q96JI7 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
SPG11Q96JI7 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC21.33■■□□□ 1
SPG11Q96JI7 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC21.33■■□□□ 1
SPG11Q96JI7 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC21.32■■□□□ 1
SPG11Q96JI7 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC21.32■■□□□ 1
SPG11Q96JI7 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC21.32■■□□□ 1
SPG11Q96JI7 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC21.32■■□□□ 1
SPG11Q96JI7 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
SPG11Q96JI7 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC21.32■■□□□ 1
SPG11Q96JI7 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC21.31■■□□□ 1
SPG11Q96JI7 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
SPG11Q96JI7 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
SPG11Q96JI7 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC21.31■■□□□ 1
SPG11Q96JI7 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
SPG11Q96JI7 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC21.3■■□□□ 1
SPG11Q96JI7 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC21.3■■□□□ 1
SPG11Q96JI7 PFN2-211ENST00000489155 636 ntTSL 4 BASIC21.29■■□□□ 1
SPG11Q96JI7 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC21.28■■□□□ 1
SPG11Q96JI7 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
SPG11Q96JI7 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC21.27■■□□□ 1
SPG11Q96JI7 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
SPG11Q96JI7 LSM7-203ENST00000585409 512 ntTSL 2 BASIC21.27■■□□□ 1
SPG11Q96JI7 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC21.27■■□□□ 1
SPG11Q96JI7 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC21.27■■□□□ 1
SPG11Q96JI7 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC21.26■□□□□ 0.99
SPG11Q96JI7 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC21.26■□□□□ 0.99
SPG11Q96JI7 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SPG11Q96JI7 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC21.26■□□□□ 0.99
SPG11Q96JI7 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
SPG11Q96JI7 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC21.25■□□□□ 0.99
SPG11Q96JI7 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC21.25■□□□□ 0.99
SPG11Q96JI7 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
SPG11Q96JI7 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SPG11Q96JI7 AC239859.2-201ENST00000444165 318 ntBASIC21.25■□□□□ 0.99
SPG11Q96JI7 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SPG11Q96JI7 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
SPG11Q96JI7 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SPG11Q96JI7 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
SPG11Q96JI7 IDNK-203ENST00000405990 629 ntTSL 2 BASIC21.24■□□□□ 0.99
SPG11Q96JI7 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
SPG11Q96JI7 PRTG-204ENST00000561292 833 ntTSL 3 BASIC21.24■□□□□ 0.99
SPG11Q96JI7 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
SPG11Q96JI7 AC100797.4-201ENST00000631653 1827 ntBASIC21.24■□□□□ 0.99
SPG11Q96JI7 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC21.24■□□□□ 0.99
SPG11Q96JI7 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SPG11Q96JI7 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
SPG11Q96JI7 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC21.23■□□□□ 0.99
SPG11Q96JI7 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
SPG11Q96JI7 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SPG11Q96JI7 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SPG11Q96JI7 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
SPG11Q96JI7 IDNK-201ENST00000376417 511 ntTSL 5 BASIC21.21■□□□□ 0.99
SPG11Q96JI7 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SPG11Q96JI7 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
SPG11Q96JI7 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC21.21■□□□□ 0.99
SPG11Q96JI7 AL031848.2-201ENST00000607670 837 ntBASIC21.21■□□□□ 0.99
SPG11Q96JI7 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
SPG11Q96JI7 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
SPG11Q96JI7 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SPG11Q96JI7 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
SPG11Q96JI7 Z92544.1-202ENST00000571933 1220 ntBASIC21.21■□□□□ 0.99
SPG11Q96JI7 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC21.21■□□□□ 0.99
SPG11Q96JI7 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SPG11Q96JI7 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.99
SPG11Q96JI7 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC21.2■□□□□ 0.99
SPG11Q96JI7 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC21.2■□□□□ 0.98
SPG11Q96JI7 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC21.2■□□□□ 0.98
SPG11Q96JI7 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SPG11Q96JI7 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
SPG11Q96JI7 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC21.19■□□□□ 0.98
SPG11Q96JI7 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SPG11Q96JI7 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
SPG11Q96JI7 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
SPG11Q96JI7 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC21.18■□□□□ 0.98
SPG11Q96JI7 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC21.18■□□□□ 0.98
SPG11Q96JI7 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC21.18■□□□□ 0.98
SPG11Q96JI7 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
SPG11Q96JI7 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC21.18■□□□□ 0.98
SPG11Q96JI7 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SPG11Q96JI7 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
SPG11Q96JI7 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
SPG11Q96JI7 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
SPG11Q96JI7 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
SPG11Q96JI7 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SPG11Q96JI7 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC21.16■□□□□ 0.98
SPG11Q96JI7 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SPG11Q96JI7 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
SPG11Q96JI7 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
SPG11Q96JI7 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SPG11Q96JI7 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC21.16■□□□□ 0.98
SPG11Q96JI7 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC21.16■□□□□ 0.98
SPG11Q96JI7 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
SPG11Q96JI7 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC21.15■□□□□ 0.98
SPG11Q96JI7 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC21.15■□□□□ 0.98
SPG11Q96JI7 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
SPG11Q96JI7 AC018755.3-202ENST00000596210 929 ntBASIC21.15■□□□□ 0.98
SPG11Q96JI7 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC21.15■□□□□ 0.98
SPG11Q96JI7 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC21.14■□□□□ 0.97
SPG11Q96JI7 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC21.14■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 52.1 ms