Protein–RNA interactions for Protein: Q96D70

R3HDM4, R3H domain-containing protein 4, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM4Q96D70 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
R3HDM4Q96D70 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
R3HDM4Q96D70 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
R3HDM4Q96D70 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC20.29■□□□□ 0.84
R3HDM4Q96D70 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC20.29■□□□□ 0.84
R3HDM4Q96D70 DUX4L13-201ENST00000554103 1267 ntBASIC20.29■□□□□ 0.84
R3HDM4Q96D70 DUX4L15-201ENST00000611059 1267 ntBASIC20.29■□□□□ 0.84
R3HDM4Q96D70 DUX4L23-201ENST00000615195 1269 ntBASIC20.29■□□□□ 0.84
R3HDM4Q96D70 DUX4L24-201ENST00000617576 1269 ntBASIC20.29■□□□□ 0.84
R3HDM4Q96D70 DUX4L22-201ENST00000618238 1269 ntBASIC20.29■□□□□ 0.84
R3HDM4Q96D70 DUX4L20-201ENST00000619712 1269 ntBASIC20.29■□□□□ 0.84
R3HDM4Q96D70 DUX4L21-201ENST00000622058 1269 ntBASIC20.29■□□□□ 0.84
R3HDM4Q96D70 DUX4L10-201ENST00000622460 1267 ntBASIC20.29■□□□□ 0.84
R3HDM4Q96D70 DUX4L25-201ENST00000624915 1269 ntBASIC20.29■□□□□ 0.84
R3HDM4Q96D70 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
R3HDM4Q96D70 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
R3HDM4Q96D70 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
R3HDM4Q96D70 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
R3HDM4Q96D70 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
R3HDM4Q96D70 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
R3HDM4Q96D70 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
R3HDM4Q96D70 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
R3HDM4Q96D70 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
R3HDM4Q96D70 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
R3HDM4Q96D70 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC20.27■□□□□ 0.84
R3HDM4Q96D70 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
R3HDM4Q96D70 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
R3HDM4Q96D70 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC20.27■□□□□ 0.84
R3HDM4Q96D70 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC20.27■□□□□ 0.83
R3HDM4Q96D70 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
R3HDM4Q96D70 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC20.26■□□□□ 0.83
R3HDM4Q96D70 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC20.26■□□□□ 0.83
R3HDM4Q96D70 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC20.26■□□□□ 0.83
R3HDM4Q96D70 ABHD17AP3-201ENST00000503096 1137 ntBASIC20.26■□□□□ 0.83
R3HDM4Q96D70 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC20.26■□□□□ 0.83
R3HDM4Q96D70 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC20.26■□□□□ 0.83
R3HDM4Q96D70 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
R3HDM4Q96D70 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
R3HDM4Q96D70 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC20.25■□□□□ 0.83
R3HDM4Q96D70 AL449106.1-201ENST00000608517 1980 ntBASIC20.25■□□□□ 0.83
R3HDM4Q96D70 HES6-205ENST00000409356 528 ntTSL 2 BASIC20.25■□□□□ 0.83
R3HDM4Q96D70 METRNL-202ENST00000570778 967 ntTSL 5 BASIC20.25■□□□□ 0.83
R3HDM4Q96D70 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
R3HDM4Q96D70 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
R3HDM4Q96D70 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC20.24■□□□□ 0.83
R3HDM4Q96D70 BRD4-212ENST00000630599 726 ntTSL 2 BASIC20.24■□□□□ 0.83
R3HDM4Q96D70 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
R3HDM4Q96D70 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
R3HDM4Q96D70 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC20.23■□□□□ 0.83
R3HDM4Q96D70 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC20.23■□□□□ 0.83
R3HDM4Q96D70 CHML-204ENST00000638121 920 ntTSL 2 BASIC20.23■□□□□ 0.83
R3HDM4Q96D70 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
R3HDM4Q96D70 AC091060.1-201ENST00000623524 1766 ntBASIC20.23■□□□□ 0.83
R3HDM4Q96D70 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
R3HDM4Q96D70 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
R3HDM4Q96D70 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
R3HDM4Q96D70 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
R3HDM4Q96D70 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
R3HDM4Q96D70 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC20.22■□□□□ 0.83
R3HDM4Q96D70 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC20.21■□□□□ 0.83
R3HDM4Q96D70 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
R3HDM4Q96D70 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC20.21■□□□□ 0.83
R3HDM4Q96D70 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC20.21■□□□□ 0.83
R3HDM4Q96D70 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
R3HDM4Q96D70 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC20.21■□□□□ 0.83
R3HDM4Q96D70 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
R3HDM4Q96D70 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
R3HDM4Q96D70 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC20.2■□□□□ 0.82
R3HDM4Q96D70 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
R3HDM4Q96D70 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
R3HDM4Q96D70 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
R3HDM4Q96D70 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
R3HDM4Q96D70 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC20.18■□□□□ 0.82
R3HDM4Q96D70 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
R3HDM4Q96D70 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
R3HDM4Q96D70 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
R3HDM4Q96D70 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC20.18■□□□□ 0.82
R3HDM4Q96D70 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
R3HDM4Q96D70 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC20.18■□□□□ 0.82
R3HDM4Q96D70 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
R3HDM4Q96D70 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
R3HDM4Q96D70 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC20.17■□□□□ 0.82
R3HDM4Q96D70 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
R3HDM4Q96D70 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
R3HDM4Q96D70 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC20.16■□□□□ 0.82
R3HDM4Q96D70 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
R3HDM4Q96D70 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
R3HDM4Q96D70 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
R3HDM4Q96D70 CHST11-202ENST00000546689 756 ntTSL 2 BASIC20.15■□□□□ 0.82
R3HDM4Q96D70 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC20.15■□□□□ 0.82
R3HDM4Q96D70 AC110285.7-201ENST00000624417 1536 ntBASIC20.15■□□□□ 0.82
R3HDM4Q96D70 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
R3HDM4Q96D70 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC20.14■□□□□ 0.81
R3HDM4Q96D70 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
R3HDM4Q96D70 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC20.14■□□□□ 0.81
R3HDM4Q96D70 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
R3HDM4Q96D70 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC20.14■□□□□ 0.81
R3HDM4Q96D70 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
R3HDM4Q96D70 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC20.13■□□□□ 0.81
R3HDM4Q96D70 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 53.1 ms