Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
RTN4IP1Q8WWV3 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC20.67■□□□□ 0.9
RTN4IP1Q8WWV3 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
RTN4IP1Q8WWV3 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC20.66■□□□□ 0.9
RTN4IP1Q8WWV3 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RTN4IP1Q8WWV3 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
RTN4IP1Q8WWV3 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC20.66■□□□□ 0.9
RTN4IP1Q8WWV3 PKM-204ENST00000449901 2526 ntTSL 2 BASIC20.66■□□□□ 0.9
RTN4IP1Q8WWV3 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
RTN4IP1Q8WWV3 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RTN4IP1Q8WWV3 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
RTN4IP1Q8WWV3 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
RTN4IP1Q8WWV3 MLEC-202ENST00000412616 841 ntTSL 3 BASIC20.65■□□□□ 0.9
RTN4IP1Q8WWV3 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC20.65■□□□□ 0.9
RTN4IP1Q8WWV3 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RTN4IP1Q8WWV3 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
RTN4IP1Q8WWV3 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RTN4IP1Q8WWV3 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RTN4IP1Q8WWV3 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
RTN4IP1Q8WWV3 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.9
RTN4IP1Q8WWV3 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
RTN4IP1Q8WWV3 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
RTN4IP1Q8WWV3 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
RTN4IP1Q8WWV3 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
RTN4IP1Q8WWV3 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
RTN4IP1Q8WWV3 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
RTN4IP1Q8WWV3 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
RTN4IP1Q8WWV3 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RTN4IP1Q8WWV3 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RTN4IP1Q8WWV3 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RTN4IP1Q8WWV3 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
RTN4IP1Q8WWV3 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
RTN4IP1Q8WWV3 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
RTN4IP1Q8WWV3 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
RTN4IP1Q8WWV3 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC20.62■□□□□ 0.89
RTN4IP1Q8WWV3 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
RTN4IP1Q8WWV3 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
RTN4IP1Q8WWV3 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RTN4IP1Q8WWV3 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
RTN4IP1Q8WWV3 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RTN4IP1Q8WWV3 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
RTN4IP1Q8WWV3 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC20.6■□□□□ 0.89
RTN4IP1Q8WWV3 AC092803.2-201ENST00000564287 1899 ntBASIC20.6■□□□□ 0.89
RTN4IP1Q8WWV3 DUSP8P4-201ENST00000399538 1761 ntBASIC20.6■□□□□ 0.89
RTN4IP1Q8WWV3 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC20.6■□□□□ 0.89
RTN4IP1Q8WWV3 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RTN4IP1Q8WWV3 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
RTN4IP1Q8WWV3 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
RTN4IP1Q8WWV3 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC20.59■□□□□ 0.89
RTN4IP1Q8WWV3 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RTN4IP1Q8WWV3 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
RTN4IP1Q8WWV3 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
RTN4IP1Q8WWV3 LINC01971-201ENST00000617888 1048 ntBASIC20.58■□□□□ 0.89
RTN4IP1Q8WWV3 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
RTN4IP1Q8WWV3 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
RTN4IP1Q8WWV3 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
RTN4IP1Q8WWV3 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
RTN4IP1Q8WWV3 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
RTN4IP1Q8WWV3 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC20.57■□□□□ 0.88
RTN4IP1Q8WWV3 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RTN4IP1Q8WWV3 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
RTN4IP1Q8WWV3 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC20.56■□□□□ 0.88
RTN4IP1Q8WWV3 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC20.56■□□□□ 0.88
RTN4IP1Q8WWV3 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RTN4IP1Q8WWV3 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RTN4IP1Q8WWV3 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RTN4IP1Q8WWV3 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC20.55■□□□□ 0.88
RTN4IP1Q8WWV3 ZNRF2P2-203ENST00000454624 420 ntBASIC20.55■□□□□ 0.88
RTN4IP1Q8WWV3 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC20.55■□□□□ 0.88
RTN4IP1Q8WWV3 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC20.55■□□□□ 0.88
RTN4IP1Q8WWV3 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
RTN4IP1Q8WWV3 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC20.55■□□□□ 0.88
RTN4IP1Q8WWV3 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC20.54■□□□□ 0.88
RTN4IP1Q8WWV3 AP004609.3-201ENST00000610705 1884 ntBASIC20.54■□□□□ 0.88
RTN4IP1Q8WWV3 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC20.54■□□□□ 0.88
RTN4IP1Q8WWV3 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
RTN4IP1Q8WWV3 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC20.54■□□□□ 0.88
RTN4IP1Q8WWV3 AC110285.7-201ENST00000624417 1536 ntBASIC20.53■□□□□ 0.88
RTN4IP1Q8WWV3 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC20.53■□□□□ 0.88
RTN4IP1Q8WWV3 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC20.53■□□□□ 0.88
RTN4IP1Q8WWV3 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
RTN4IP1Q8WWV3 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
RTN4IP1Q8WWV3 ABHD17AP4-201ENST00000411545 909 ntBASIC20.52■□□□□ 0.88
RTN4IP1Q8WWV3 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
RTN4IP1Q8WWV3 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
RTN4IP1Q8WWV3 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
RTN4IP1Q8WWV3 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
RTN4IP1Q8WWV3 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
RTN4IP1Q8WWV3 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
RTN4IP1Q8WWV3 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
RTN4IP1Q8WWV3 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC20.5■□□□□ 0.87
RTN4IP1Q8WWV3 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
RTN4IP1Q8WWV3 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
RTN4IP1Q8WWV3 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC20.49■□□□□ 0.87
RTN4IP1Q8WWV3 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC20.49■□□□□ 0.87
RTN4IP1Q8WWV3 CHML-204ENST00000638121 920 ntTSL 2 BASIC20.49■□□□□ 0.87
RTN4IP1Q8WWV3 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
RTN4IP1Q8WWV3 DUX4L11-201ENST00000611504 1267 ntBASIC20.48■□□□□ 0.87
RTN4IP1Q8WWV3 DUX4L12-201ENST00000614593 1267 ntBASIC20.48■□□□□ 0.87
RTN4IP1Q8WWV3 DUX4L14-201ENST00000621227 1267 ntBASIC20.48■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms