Protein–RNA interactions for Protein: Q8NG48

LINS1, Protein Lines homolog 1, humanhuman

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINS1Q8NG48 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC31.3■■■□□ 2.6
LINS1Q8NG48 AC025884.2-201ENST00000553429 711 ntBASIC31.3■■■□□ 2.6
LINS1Q8NG48 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
LINS1Q8NG48 HYI-213ENST00000583037 1322 ntTSL 5 BASIC31.29■■■□□ 2.6
LINS1Q8NG48 REST-210ENST00000638187 1334 ntTSL 5 BASIC31.29■■■□□ 2.6
LINS1Q8NG48 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
LINS1Q8NG48 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC31.29■■■□□ 2.6
LINS1Q8NG48 SMPD5-203ENST00000639008 1464 ntBASIC31.29■■■□□ 2.6
LINS1Q8NG48 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC31.29■■■□□ 2.6
LINS1Q8NG48 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC31.29■■■□□ 2.6
LINS1Q8NG48 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC31.29■■■□□ 2.6
LINS1Q8NG48 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC31.29■■■□□ 2.6
LINS1Q8NG48 AC142086.6-201ENST00000621154 1765 ntBASIC31.28■■■□□ 2.6
LINS1Q8NG48 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC31.28■■■□□ 2.6
LINS1Q8NG48 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC31.28■■■□□ 2.6
LINS1Q8NG48 NTF6A-201ENST00000591175 560 ntBASIC31.28■■■□□ 2.6
LINS1Q8NG48 AC007029.1-201ENST00000604183 313 ntBASIC31.28■■■□□ 2.6
LINS1Q8NG48 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC31.27■■■□□ 2.6
LINS1Q8NG48 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC31.27■■■□□ 2.6
LINS1Q8NG48 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC31.27■■■□□ 2.6
LINS1Q8NG48 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC31.27■■■□□ 2.6
LINS1Q8NG48 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC31.26■■■□□ 2.59
LINS1Q8NG48 U85056.1-201ENST00000616429 682 ntBASIC31.26■■■□□ 2.59
LINS1Q8NG48 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC31.25■■■□□ 2.59
LINS1Q8NG48 BX255925.1-201ENST00000566954 1854 ntBASIC31.25■■■□□ 2.59
LINS1Q8NG48 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC31.25■■■□□ 2.59
LINS1Q8NG48 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
LINS1Q8NG48 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC31.24■■■□□ 2.59
LINS1Q8NG48 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC31.24■■■□□ 2.59
LINS1Q8NG48 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC31.24■■■□□ 2.59
LINS1Q8NG48 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC31.24■■■□□ 2.59
LINS1Q8NG48 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC31.23■■■□□ 2.59
LINS1Q8NG48 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC31.23■■■□□ 2.59
LINS1Q8NG48 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC31.23■■■□□ 2.59
LINS1Q8NG48 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
LINS1Q8NG48 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC31.22■■■□□ 2.59
LINS1Q8NG48 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC31.22■■■□□ 2.59
LINS1Q8NG48 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC31.22■■■□□ 2.59
LINS1Q8NG48 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC31.22■■■□□ 2.59
LINS1Q8NG48 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC31.21■■■□□ 2.59
LINS1Q8NG48 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
LINS1Q8NG48 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC31.2■■■□□ 2.59
LINS1Q8NG48 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC31.2■■■□□ 2.59
LINS1Q8NG48 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC31.2■■■□□ 2.59
LINS1Q8NG48 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC31.2■■■□□ 2.59
LINS1Q8NG48 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC31.2■■■□□ 2.59
LINS1Q8NG48 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC31.2■■■□□ 2.58
LINS1Q8NG48 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC31.2■■■□□ 2.58
LINS1Q8NG48 AL359504.2-201ENST00000605506 1601 ntBASIC31.2■■■□□ 2.58
LINS1Q8NG48 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
LINS1Q8NG48 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC31.19■■■□□ 2.58
LINS1Q8NG48 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC31.19■■■□□ 2.58
LINS1Q8NG48 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC31.19■■■□□ 2.58
LINS1Q8NG48 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
LINS1Q8NG48 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC31.18■■■□□ 2.58
LINS1Q8NG48 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC31.18■■■□□ 2.58
LINS1Q8NG48 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC31.17■■■□□ 2.58
LINS1Q8NG48 PFN2-211ENST00000489155 636 ntTSL 4 BASIC31.17■■■□□ 2.58
LINS1Q8NG48 AL449106.1-201ENST00000608517 1980 ntBASIC31.17■■■□□ 2.58
LINS1Q8NG48 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC31.17■■■□□ 2.58
LINS1Q8NG48 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC31.16■■■□□ 2.58
LINS1Q8NG48 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC31.15■■■□□ 2.58
LINS1Q8NG48 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC31.15■■■□□ 2.58
LINS1Q8NG48 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC31.15■■■□□ 2.58
LINS1Q8NG48 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC31.15■■■□□ 2.58
LINS1Q8NG48 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
LINS1Q8NG48 GFER-205ENST00000569451 517 ntTSL 5 BASIC31.14■■■□□ 2.58
LINS1Q8NG48 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC31.14■■■□□ 2.58
LINS1Q8NG48 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC31.14■■■□□ 2.58
LINS1Q8NG48 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC31.14■■■□□ 2.58
LINS1Q8NG48 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC31.13■■■□□ 2.57
LINS1Q8NG48 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC31.13■■■□□ 2.57
LINS1Q8NG48 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC31.13■■■□□ 2.57
LINS1Q8NG48 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC31.12■■■□□ 2.57
LINS1Q8NG48 RP9P-202ENST00000450133 1212 ntBASIC31.12■■■□□ 2.57
LINS1Q8NG48 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC31.12■■■□□ 2.57
LINS1Q8NG48 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC31.12■■■□□ 2.57
LINS1Q8NG48 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC31.12■■■□□ 2.57
LINS1Q8NG48 KRT18P60-201ENST00000312876 1297 ntBASIC31.11■■■□□ 2.57
LINS1Q8NG48 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC31.11■■■□□ 2.57
LINS1Q8NG48 AC009831.1-201ENST00000580420 1582 ntBASIC31.11■■■□□ 2.57
LINS1Q8NG48 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC31.11■■■□□ 2.57
LINS1Q8NG48 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC31.1■■■□□ 2.57
LINS1Q8NG48 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC31.1■■■□□ 2.57
LINS1Q8NG48 MIR3960-201ENST00000583311 91 ntBASIC31.1■■■□□ 2.57
LINS1Q8NG48 AC026202.3-201ENST00000600805 1127 ntBASIC31.1■■■□□ 2.57
LINS1Q8NG48 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
LINS1Q8NG48 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC31.09■■■□□ 2.57
LINS1Q8NG48 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
LINS1Q8NG48 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC31.09■■■□□ 2.57
LINS1Q8NG48 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC31.08■■■□□ 2.57
LINS1Q8NG48 AC093536.1-201ENST00000569153 554 ntBASIC31.08■■■□□ 2.57
LINS1Q8NG48 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
LINS1Q8NG48 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.57
LINS1Q8NG48 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
LINS1Q8NG48 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC31.07■■■□□ 2.56
LINS1Q8NG48 AC133552.2-201ENST00000619106 1032 ntBASIC31.07■■■□□ 2.56
LINS1Q8NG48 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC31.07■■■□□ 2.56
LINS1Q8NG48 SHF-208ENST00000560734 1731 ntTSL 3 BASIC31.07■■■□□ 2.56
LINS1Q8NG48 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC31.06■■■□□ 2.56
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms