Protein–RNA interactions for Protein: Q8IYX3

CCDC116, Coiled-coil domain-containing protein 116, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116Q8IYX3 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC23.31■■□□□ 1.32
CCDC116Q8IYX3 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC23.31■■□□□ 1.32
CCDC116Q8IYX3 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
CCDC116Q8IYX3 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
CCDC116Q8IYX3 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
CCDC116Q8IYX3 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC23.3■■□□□ 1.32
CCDC116Q8IYX3 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
CCDC116Q8IYX3 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC23.3■■□□□ 1.32
CCDC116Q8IYX3 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC23.3■■□□□ 1.32
CCDC116Q8IYX3 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC23.3■■□□□ 1.32
CCDC116Q8IYX3 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC23.3■■□□□ 1.32
CCDC116Q8IYX3 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC23.3■■□□□ 1.32
CCDC116Q8IYX3 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
CCDC116Q8IYX3 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
CCDC116Q8IYX3 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
CCDC116Q8IYX3 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
CCDC116Q8IYX3 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
CCDC116Q8IYX3 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC23.29■■□□□ 1.32
CCDC116Q8IYX3 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC23.29■■□□□ 1.32
CCDC116Q8IYX3 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
CCDC116Q8IYX3 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC23.28■■□□□ 1.32
CCDC116Q8IYX3 AP004609.3-201ENST00000610705 1884 ntBASIC23.28■■□□□ 1.32
CCDC116Q8IYX3 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC23.28■■□□□ 1.32
CCDC116Q8IYX3 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC23.27■■□□□ 1.32
CCDC116Q8IYX3 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC23.27■■□□□ 1.32
CCDC116Q8IYX3 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
CCDC116Q8IYX3 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
CCDC116Q8IYX3 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
CCDC116Q8IYX3 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
CCDC116Q8IYX3 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
CCDC116Q8IYX3 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
CCDC116Q8IYX3 RPS2-202ENST00000526522 924 ntTSL 2 BASIC23.26■■□□□ 1.31
CCDC116Q8IYX3 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
CCDC116Q8IYX3 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
CCDC116Q8IYX3 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
CCDC116Q8IYX3 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC23.25■■□□□ 1.31
CCDC116Q8IYX3 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC23.25■■□□□ 1.31
CCDC116Q8IYX3 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC23.24■■□□□ 1.31
CCDC116Q8IYX3 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
CCDC116Q8IYX3 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
CCDC116Q8IYX3 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC23.24■■□□□ 1.31
CCDC116Q8IYX3 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
CCDC116Q8IYX3 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
CCDC116Q8IYX3 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC23.23■■□□□ 1.31
CCDC116Q8IYX3 MIR639-201ENST00000384974 98 ntBASIC23.23■■□□□ 1.31
CCDC116Q8IYX3 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC23.23■■□□□ 1.31
CCDC116Q8IYX3 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
CCDC116Q8IYX3 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
CCDC116Q8IYX3 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
CCDC116Q8IYX3 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC23.22■■□□□ 1.31
CCDC116Q8IYX3 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC23.22■■□□□ 1.31
CCDC116Q8IYX3 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC23.22■■□□□ 1.31
CCDC116Q8IYX3 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
CCDC116Q8IYX3 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC23.22■■□□□ 1.31
CCDC116Q8IYX3 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC23.22■■□□□ 1.31
CCDC116Q8IYX3 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC23.21■■□□□ 1.31
CCDC116Q8IYX3 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC23.21■■□□□ 1.31
CCDC116Q8IYX3 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
CCDC116Q8IYX3 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
CCDC116Q8IYX3 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC23.21■■□□□ 1.31
CCDC116Q8IYX3 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
CCDC116Q8IYX3 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
CCDC116Q8IYX3 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC23.2■■□□□ 1.3
CCDC116Q8IYX3 AL359258.2-201ENST00000564063 1566 ntBASIC23.2■■□□□ 1.3
CCDC116Q8IYX3 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC23.2■■□□□ 1.3
CCDC116Q8IYX3 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC23.2■■□□□ 1.3
CCDC116Q8IYX3 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC23.2■■□□□ 1.3
CCDC116Q8IYX3 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
CCDC116Q8IYX3 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC23.19■■□□□ 1.3
CCDC116Q8IYX3 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC23.19■■□□□ 1.3
CCDC116Q8IYX3 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
CCDC116Q8IYX3 AC142472.1-201ENST00000612013 1741 ntBASIC23.19■■□□□ 1.3
CCDC116Q8IYX3 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC23.18■■□□□ 1.3
CCDC116Q8IYX3 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
CCDC116Q8IYX3 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
CCDC116Q8IYX3 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
CCDC116Q8IYX3 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC23.18■■□□□ 1.3
CCDC116Q8IYX3 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC23.18■■□□□ 1.3
CCDC116Q8IYX3 MED25-210ENST00000612854 801 ntTSL 5 BASIC23.18■■□□□ 1.3
CCDC116Q8IYX3 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
CCDC116Q8IYX3 MED25-214ENST00000622402 642 ntTSL 5 BASIC23.18■■□□□ 1.3
CCDC116Q8IYX3 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
CCDC116Q8IYX3 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC23.17■■□□□ 1.3
CCDC116Q8IYX3 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
CCDC116Q8IYX3 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
CCDC116Q8IYX3 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC23.17■■□□□ 1.3
CCDC116Q8IYX3 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC23.16■■□□□ 1.3
CCDC116Q8IYX3 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC23.16■■□□□ 1.3
CCDC116Q8IYX3 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC23.16■■□□□ 1.3
CCDC116Q8IYX3 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC23.15■■□□□ 1.3
CCDC116Q8IYX3 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
CCDC116Q8IYX3 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
CCDC116Q8IYX3 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.3
CCDC116Q8IYX3 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.29
CCDC116Q8IYX3 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
CCDC116Q8IYX3 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
CCDC116Q8IYX3 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
CCDC116Q8IYX3 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
CCDC116Q8IYX3 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
CCDC116Q8IYX3 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms