Protein–RNA interactions for Protein: Q5VTR2

RNF20, E3 ubiquitin-protein ligase BRE1A, humanhuman

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF20Q5VTR2 AP004609.3-201ENST00000610705 1884 ntBASIC29.56■■■□□ 2.32
RNF20Q5VTR2 AC016575.1-201ENST00000607026 382 ntBASIC29.55■■■□□ 2.32
RNF20Q5VTR2 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
RNF20Q5VTR2 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC29.55■■■□□ 2.32
RNF20Q5VTR2 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC29.55■■■□□ 2.32
RNF20Q5VTR2 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
RNF20Q5VTR2 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
RNF20Q5VTR2 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC29.54■■■□□ 2.32
RNF20Q5VTR2 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC29.54■■■□□ 2.32
RNF20Q5VTR2 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC29.54■■■□□ 2.32
RNF20Q5VTR2 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC29.54■■■□□ 2.32
RNF20Q5VTR2 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC29.53■■■□□ 2.32
RNF20Q5VTR2 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC29.53■■■□□ 2.32
RNF20Q5VTR2 CREM-210ENST00000374721 2020 ntTSL 5 BASIC29.53■■■□□ 2.32
RNF20Q5VTR2 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC29.53■■■□□ 2.32
RNF20Q5VTR2 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC29.53■■■□□ 2.32
RNF20Q5VTR2 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC29.53■■■□□ 2.32
RNF20Q5VTR2 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC29.53■■■□□ 2.32
RNF20Q5VTR2 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC29.52■■■□□ 2.32
RNF20Q5VTR2 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC29.52■■■□□ 2.32
RNF20Q5VTR2 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC29.52■■■□□ 2.32
RNF20Q5VTR2 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC29.51■■■□□ 2.32
RNF20Q5VTR2 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC29.51■■■□□ 2.31
RNF20Q5VTR2 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC29.51■■■□□ 2.31
RNF20Q5VTR2 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC29.51■■■□□ 2.31
RNF20Q5VTR2 AC142472.1-201ENST00000612013 1741 ntBASIC29.51■■■□□ 2.31
RNF20Q5VTR2 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC29.5■■■□□ 2.31
RNF20Q5VTR2 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC29.5■■■□□ 2.31
RNF20Q5VTR2 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC29.49■■■□□ 2.31
RNF20Q5VTR2 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC29.49■■■□□ 2.31
RNF20Q5VTR2 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC29.49■■■□□ 2.31
RNF20Q5VTR2 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC29.49■■■□□ 2.31
RNF20Q5VTR2 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC29.48■■■□□ 2.31
RNF20Q5VTR2 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC29.48■■■□□ 2.31
RNF20Q5VTR2 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC29.48■■■□□ 2.31
RNF20Q5VTR2 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC29.48■■■□□ 2.31
RNF20Q5VTR2 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC29.47■■■□□ 2.31
RNF20Q5VTR2 METRNL-202ENST00000570778 967 ntTSL 5 BASIC29.47■■■□□ 2.31
RNF20Q5VTR2 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC29.47■■■□□ 2.31
RNF20Q5VTR2 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC29.46■■■□□ 2.31
RNF20Q5VTR2 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC29.46■■■□□ 2.31
RNF20Q5VTR2 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC29.46■■■□□ 2.31
RNF20Q5VTR2 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC29.45■■■□□ 2.31
RNF20Q5VTR2 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC29.45■■■□□ 2.31
RNF20Q5VTR2 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC29.45■■■□□ 2.31
RNF20Q5VTR2 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC29.45■■■□□ 2.31
RNF20Q5VTR2 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC29.45■■■□□ 2.31
RNF20Q5VTR2 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC29.45■■■□□ 2.3
RNF20Q5VTR2 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.3
RNF20Q5VTR2 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC29.45■■■□□ 2.3
RNF20Q5VTR2 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
RNF20Q5VTR2 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC29.44■■■□□ 2.3
RNF20Q5VTR2 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC29.43■■■□□ 2.3
RNF20Q5VTR2 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
RNF20Q5VTR2 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC29.43■■■□□ 2.3
RNF20Q5VTR2 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC29.43■■■□□ 2.3
RNF20Q5VTR2 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC29.42■■■□□ 2.3
RNF20Q5VTR2 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC29.42■■■□□ 2.3
RNF20Q5VTR2 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC29.42■■■□□ 2.3
RNF20Q5VTR2 PVT1-219ENST00000523427 938 ntTSL 3 BASIC29.42■■■□□ 2.3
RNF20Q5VTR2 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC29.42■■■□□ 2.3
RNF20Q5VTR2 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC29.41■■■□□ 2.3
RNF20Q5VTR2 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC29.41■■■□□ 2.3
RNF20Q5VTR2 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC29.4■■■□□ 2.3
RNF20Q5VTR2 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC29.4■■■□□ 2.3
RNF20Q5VTR2 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC29.4■■■□□ 2.3
RNF20Q5VTR2 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC29.4■■■□□ 2.3
RNF20Q5VTR2 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC29.4■■■□□ 2.3
RNF20Q5VTR2 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
RNF20Q5VTR2 AL359258.2-201ENST00000564063 1566 ntBASIC29.39■■■□□ 2.3
RNF20Q5VTR2 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.3
RNF20Q5VTR2 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC29.39■■■□□ 2.3
RNF20Q5VTR2 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC29.39■■■□□ 2.3
RNF20Q5VTR2 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC29.39■■■□□ 2.3
RNF20Q5VTR2 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC29.39■■■□□ 2.3
RNF20Q5VTR2 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC29.39■■■□□ 2.3
RNF20Q5VTR2 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC29.38■■■□□ 2.29
RNF20Q5VTR2 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC29.37■■■□□ 2.29
RNF20Q5VTR2 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC29.37■■■□□ 2.29
RNF20Q5VTR2 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC29.37■■■□□ 2.29
RNF20Q5VTR2 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC29.37■■■□□ 2.29
RNF20Q5VTR2 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC29.37■■■□□ 2.29
RNF20Q5VTR2 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC29.37■■■□□ 2.29
RNF20Q5VTR2 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC29.37■■■□□ 2.29
RNF20Q5VTR2 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC29.36■■■□□ 2.29
RNF20Q5VTR2 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC29.36■■■□□ 2.29
RNF20Q5VTR2 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC29.36■■■□□ 2.29
RNF20Q5VTR2 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC29.35■■■□□ 2.29
RNF20Q5VTR2 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC29.35■■■□□ 2.29
RNF20Q5VTR2 AC126177.7-201ENST00000547904 679 ntBASIC29.35■■■□□ 2.29
RNF20Q5VTR2 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC29.35■■■□□ 2.29
RNF20Q5VTR2 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC29.34■■■□□ 2.29
RNF20Q5VTR2 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC29.33■■■□□ 2.29
RNF20Q5VTR2 MIR639-201ENST00000384974 98 ntBASIC29.33■■■□□ 2.29
RNF20Q5VTR2 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC29.33■■■□□ 2.29
RNF20Q5VTR2 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC29.32■■■□□ 2.28
RNF20Q5VTR2 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC29.32■■■□□ 2.28
RNF20Q5VTR2 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC29.32■■■□□ 2.28
RNF20Q5VTR2 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
RNF20Q5VTR2 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC29.31■■■□□ 2.28
Retrieved 100 of 98,524 protein–RNA pairs in 119.8 ms