Protein–RNA interactions for Protein: Q15768

EFNB3, Ephrin-B3, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB3Q15768 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC21.17■□□□□ 0.98
EFNB3Q15768 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
EFNB3Q15768 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
EFNB3Q15768 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
EFNB3Q15768 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC21.16■□□□□ 0.98
EFNB3Q15768 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
EFNB3Q15768 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC21.16■□□□□ 0.98
EFNB3Q15768 AC012354.3-201ENST00000623734 483 ntBASIC21.16■□□□□ 0.98
EFNB3Q15768 WHAMMP3-201ENST00000611636 1609 ntBASIC21.15■□□□□ 0.98
EFNB3Q15768 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
EFNB3Q15768 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
EFNB3Q15768 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC21.15■□□□□ 0.98
EFNB3Q15768 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
EFNB3Q15768 GFER-205ENST00000569451 517 ntTSL 5 BASIC21.15■□□□□ 0.98
EFNB3Q15768 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
EFNB3Q15768 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC21.14■□□□□ 0.98
EFNB3Q15768 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC21.14■□□□□ 0.97
EFNB3Q15768 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
EFNB3Q15768 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
EFNB3Q15768 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
EFNB3Q15768 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
EFNB3Q15768 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
EFNB3Q15768 PFN2-211ENST00000489155 636 ntTSL 4 BASIC21.12■□□□□ 0.97
EFNB3Q15768 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
EFNB3Q15768 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC21.12■□□□□ 0.97
EFNB3Q15768 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
EFNB3Q15768 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC21.11■□□□□ 0.97
EFNB3Q15768 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC21.11■□□□□ 0.97
EFNB3Q15768 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
EFNB3Q15768 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
EFNB3Q15768 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
EFNB3Q15768 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
EFNB3Q15768 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
EFNB3Q15768 KRT18P60-201ENST00000312876 1297 ntBASIC21.1■□□□□ 0.97
EFNB3Q15768 RP9P-202ENST00000450133 1212 ntBASIC21.1■□□□□ 0.97
EFNB3Q15768 MIR3960-201ENST00000583311 91 ntBASIC21.1■□□□□ 0.97
EFNB3Q15768 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
EFNB3Q15768 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
EFNB3Q15768 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
EFNB3Q15768 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC21.09■□□□□ 0.97
EFNB3Q15768 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
EFNB3Q15768 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
EFNB3Q15768 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
EFNB3Q15768 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
EFNB3Q15768 AC009831.1-201ENST00000580420 1582 ntBASIC21.08■□□□□ 0.97
EFNB3Q15768 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
EFNB3Q15768 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
EFNB3Q15768 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
EFNB3Q15768 HES4-204ENST00000484667 667 ntTSL 3 BASIC21.07■□□□□ 0.96
EFNB3Q15768 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
EFNB3Q15768 AC026202.3-201ENST00000600805 1127 ntBASIC21.07■□□□□ 0.96
EFNB3Q15768 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
EFNB3Q15768 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC21.07■□□□□ 0.96
EFNB3Q15768 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC21.07■□□□□ 0.96
EFNB3Q15768 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC21.06■□□□□ 0.96
EFNB3Q15768 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
EFNB3Q15768 LINC01003-201ENST00000564834 1764 ntBASIC21.06■□□□□ 0.96
EFNB3Q15768 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC21.06■□□□□ 0.96
EFNB3Q15768 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
EFNB3Q15768 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC21.06■□□□□ 0.96
EFNB3Q15768 AC133552.2-201ENST00000619106 1032 ntBASIC21.06■□□□□ 0.96
EFNB3Q15768 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
EFNB3Q15768 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC21.06■□□□□ 0.96
EFNB3Q15768 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
EFNB3Q15768 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC21.05■□□□□ 0.96
EFNB3Q15768 AL359504.2-201ENST00000605506 1601 ntBASIC21.05■□□□□ 0.96
EFNB3Q15768 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
EFNB3Q15768 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
EFNB3Q15768 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
EFNB3Q15768 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
EFNB3Q15768 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
EFNB3Q15768 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC21.04■□□□□ 0.96
EFNB3Q15768 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
EFNB3Q15768 AC093536.1-201ENST00000569153 554 ntBASIC21.04■□□□□ 0.96
EFNB3Q15768 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
EFNB3Q15768 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
EFNB3Q15768 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
EFNB3Q15768 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
EFNB3Q15768 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
EFNB3Q15768 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
EFNB3Q15768 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC21.03■□□□□ 0.96
EFNB3Q15768 AL592293.1-201ENST00000502889 1188 ntBASIC21.03■□□□□ 0.96
EFNB3Q15768 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
EFNB3Q15768 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
EFNB3Q15768 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
EFNB3Q15768 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
EFNB3Q15768 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
EFNB3Q15768 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
EFNB3Q15768 RAP2CP1-202ENST00000605179 643 ntBASIC21.02■□□□□ 0.96
EFNB3Q15768 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
EFNB3Q15768 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
EFNB3Q15768 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC21.01■□□□□ 0.95
EFNB3Q15768 TSPY13P-201ENST00000338964 914 ntBASIC21.01■□□□□ 0.95
EFNB3Q15768 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
EFNB3Q15768 ATP5G2P3-201ENST00000429083 425 ntBASIC21.01■□□□□ 0.95
EFNB3Q15768 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
EFNB3Q15768 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
EFNB3Q15768 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
EFNB3Q15768 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC21■□□□□ 0.95
EFNB3Q15768 AC004987.1-201ENST00000428627 508 ntBASIC21■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms