Protein–RNA interactions for Protein: P25336

MSH3, DNA mismatch repair protein MSH3, yeastyeast

Predictions only

Length 1,018 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
MSH3P25336 tL(UAA)KtL(UAA)K 84 nt7.97□□□□□ -1.13
MSH3P25336 tL(UAA)LtL(UAA)L 84 nt7.97□□□□□ -1.13
MSH3P25336 tL(UAA)NtL(UAA)N 84 nt7.97□□□□□ -1.13
MSH3P25336 MRPL24YMR193W 777 nt7.97□□□□□ -1.13
MSH3P25336 YIL092WYIL092W 1902 nt7.97□□□□□ -1.13
MSH3P25336 RQC1YDR333C 2172 nt7.96□□□□□ -1.14
MSH3P25336 NMD5YJR132W 3147 nt7.96□□□□□ -1.14
MSH3P25336 SKP1YDR328C 585 nt7.96□□□□□ -1.14
MSH3P25336 SLD7YOR060C 774 nt7.96□□□□□ -1.14
MSH3P25336 ADE17YMR120C 1779 nt7.95□□□□□ -1.14
MSH3P25336 YAL016C-AYAL016C-A 315 nt7.95□□□□□ -1.14
MSH3P25336 PEX12YMR026C 1200 nt7.95□□□□□ -1.14
MSH3P25336 FCY2YER056C 1602 nt7.95□□□□□ -1.14
MSH3P25336 RDR1YOR380W 1641 nt7.95□□□□□ -1.14
MSH3P25336 SEC23YPR181C 2307 nt7.94□□□□□ -1.14
MSH3P25336 RAI1YGL246C 1164 nt7.94□□□□□ -1.14
MSH3P25336 ORM1YGR038W 669 nt7.94□□□□□ -1.14
MSH3P25336 NCA3YJL116C 1014 nt7.94□□□□□ -1.14
MSH3P25336 TAF11YML015C 1041 nt7.94□□□□□ -1.14
MSH3P25336 TOS1YBR162C 1368 nt7.94□□□□□ -1.14
MSH3P25336 OSM1YJR051W 1506 nt7.93□□□□□ -1.14
MSH3P25336 YDR476CYDR476C 675 nt7.93□□□□□ -1.14
MSH3P25336 NMA2YGR010W 1188 nt7.93□□□□□ -1.14
MSH3P25336 LOT6YLR011W 576 nt7.93□□□□□ -1.14
MSH3P25336 YML079WYML079W 606 nt7.93□□□□□ -1.14
MSH3P25336 MRI1YPR118W 1236 nt7.93□□□□□ -1.14
MSH3P25336 ATG23YLR431C 1362 nt7.93□□□□□ -1.14
MSH3P25336 YMR114CYMR114C 1107 nt7.92□□□□□ -1.14
MSH3P25336 SGE1YPR198W 1632 nt7.92□□□□□ -1.14
MSH3P25336 FUS3YBL016W 1062 nt7.91□□□□□ -1.14
MSH3P25336 YNR048WYNR048W 1182 nt7.91□□□□□ -1.14
MSH3P25336 EXG2YDR261C 1689 nt7.91□□□□□ -1.14
MSH3P25336 EMP65YER140W 1671 nt7.91□□□□□ -1.14
MSH3P25336 NUP84YDL116W 2181 nt7.9□□□□□ -1.14
MSH3P25336 SNU71YGR013W 1863 nt7.9□□□□□ -1.14
MSH3P25336 EFM1YHL039W 1758 nt7.9□□□□□ -1.14
MSH3P25336 PIL1YGR086C 1020 nt7.9□□□□□ -1.14
MSH3P25336 YHR140WYHR140W 720 nt7.9□□□□□ -1.14
MSH3P25336 CCW12YLR110C 402 nt7.9□□□□□ -1.14
MSH3P25336 VMA2YBR127C 1554 nt7.89□□□□□ -1.15
MSH3P25336 CDS1YBR029C 1374 nt7.89□□□□□ -1.15
MSH3P25336 AI3Q0060 1248 nt7.89□□□□□ -1.15
MSH3P25336 YMR074CYMR074C 438 nt7.89□□□□□ -1.15
MSH3P25336 MSI1YBR195C 1269 nt7.89□□□□□ -1.15
MSH3P25336 YJL213WYJL213W 996 nt7.88□□□□□ -1.15
MSH3P25336 YOL079WYOL079W 399 nt7.88□□□□□ -1.15
MSH3P25336 CDC7YDL017W 1524 nt7.88□□□□□ -1.15
MSH3P25336 ECM27YJR106W 2178 nt7.87□□□□□ -1.15
MSH3P25336 CLN1YMR199W 1641 nt7.87□□□□□ -1.15
MSH3P25336 KIN1YDR122W 3195 nt7.87□□□□□ -1.15
MSH3P25336 PGI1YBR196C 1665 nt7.86□□□□□ -1.15
MSH3P25336 SED5YLR026C 1023 nt7.86□□□□□ -1.15
MSH3P25336 snR34snR34 203 nt7.86□□□□□ -1.15
MSH3P25336 MHP1YJL042W 4197 nt7.85□□□□□ -1.15
MSH3P25336 SUF3tG(CCC)D 72 nt7.85□□□□□ -1.15
MSH3P25336 AVO2YMR068W 1281 nt7.85□□□□□ -1.15
MSH3P25336 VBA5YKR105C 1749 nt7.85□□□□□ -1.15
MSH3P25336 CDC3YLR314C 1563 nt7.84□□□□□ -1.15
MSH3P25336 YGL081WYGL081W 963 nt7.84□□□□□ -1.15
MSH3P25336 YLR036CYLR036C 612 nt7.84□□□□□ -1.15
MSH3P25336 SUN4YNL066W 1263 nt7.84□□□□□ -1.15
MSH3P25336 CDC10YCR002C 969 nt7.83□□□□□ -1.16
MSH3P25336 YCR041WYCR041W 333 nt7.83□□□□□ -1.16
MSH3P25336 DOC1YGL240W 753 nt7.83□□□□□ -1.16
MSH3P25336 ERG27YLR100W 1044 nt7.83□□□□□ -1.16
MSH3P25336 PHO85YPL031C 918 nt7.83□□□□□ -1.16
MSH3P25336 PET494YNR045W 1470 nt7.82□□□□□ -1.16
MSH3P25336 TIF34YMR146C 1044 nt7.82□□□□□ -1.16
MSH3P25336 HHY1YEL059W 309 nt7.81□□□□□ -1.16
MSH3P25336 SNF4YGL115W 969 nt7.81□□□□□ -1.16
MSH3P25336 RRN10YBL025W 438 nt7.81□□□□□ -1.16
MSH3P25336 CIT2YCR005C 1383 nt7.81□□□□□ -1.16
MSH3P25336 PET117YER058W 324 nt7.8□□□□□ -1.16
MSH3P25336 REV7YIL139C 738 nt7.8□□□□□ -1.16
MSH3P25336 YLR112WYLR112W 420 nt7.8□□□□□ -1.16
MSH3P25336 YOR012WYOR012W 414 nt7.8□□□□□ -1.16
MSH3P25336 OST3YOR085W 1053 nt7.8□□□□□ -1.16
MSH3P25336 PTC7YHR076W 1032 nt7.79□□□□□ -1.16
MSH3P25336 MAD2YJL030W 591 nt7.79□□□□□ -1.16
MSH3P25336 YBR138CYBR138C 1575 nt7.79□□□□□ -1.16
MSH3P25336 TRP1YDR007W 675 nt7.78□□□□□ -1.16
MSH3P25336 DMC1YER179W 1005 nt7.78□□□□□ -1.16
MSH3P25336 DBR1YKL149C 1218 nt7.78□□□□□ -1.16
MSH3P25336 YOR268CYOR268C 399 nt7.78□□□□□ -1.16
MSH3P25336 SMK1YPR054W 1167 nt7.78□□□□□ -1.16
MSH3P25336 ASN2YGR124W 1719 nt7.78□□□□□ -1.16
MSH3P25336 ISR1YPR106W 1332 nt7.78□□□□□ -1.16
MSH3P25336 YBR284WYBR284W 2394 nt7.77□□□□□ -1.17
MSH3P25336 YLR311CYLR311C 348 nt7.77□□□□□ -1.17
MSH3P25336 RTC4YNL254C 1206 nt7.77□□□□□ -1.17
MSH3P25336 SDH8YBR269C 417 nt7.77□□□□□ -1.17
MSH3P25336 PAC10YGR078C 600 nt7.76□□□□□ -1.17
MSH3P25336 YAL016C-BYAL016C-B 186 nt7.76□□□□□ -1.17
MSH3P25336 ISY1YJR050W 708 nt7.76□□□□□ -1.17
MSH3P25336 YML122CYML122C 381 nt7.76□□□□□ -1.17
MSH3P25336 SPC24YMR117C 642 nt7.76□□□□□ -1.17
MSH3P25336 RPL43AYPR043W 279 nt7.76□□□□□ -1.17
MSH3P25336 DIT1YDR403W 1611 nt7.75□□□□□ -1.17
MSH3P25336 YPR127WYPR127W 1038 nt7.75□□□□□ -1.17
MSH3P25336 DPM1YPR183W 804 nt7.75□□□□□ -1.17
Retrieved 100 of 7,029 protein–RNA pairs in 55.2 ms