RNA–Protein interactions for RNA: YBR029C

CDS1, Transcript of Phosphatidate cytidylyltransferase (CDP-diglyceride synthetase), yeastyeast

Gene CDS1, Length 1,374 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDS1YBR029C DRS1P32892 752 aaKnown RBP16.59■□□□□ 0.25
CDS1YBR029C MTC1P47018 478 aaKnown RBP15.91■□□□□ 0.14
CDS1YBR029C BFR2Q06631 534 aaKnown RBP14.6□□□□□ -0.07
CDS1YBR029C FAP1P53971 965 aa14.28□□□□□ -0.12
CDS1YBR029C TFA1P36100 482 aa14.08□□□□□ -0.16
CDS1YBR029C DIP2Q12220 943 aaPredicted RBP13.93□□□□□ -0.18
CDS1YBR029C AVT3P36062 692 aa13.83□□□□□ -0.2
CDS1YBR029C PRY3P47033 881 aa13.44□□□□□ -0.26
CDS1YBR029C AAD16Q02895 342 aa13.15□□□□□ -0.3
CDS1YBR029C PRI1P10363 409 aa13.14□□□□□ -0.31
CDS1YBR029C RSE1Q04693 1361 aaKnown RBP13□□□□□ -0.33
CDS1YBR029C ISW2Q08773 1120 aa12.89□□□□□ -0.35
CDS1YBR029C HAA1Q12753 694 aaKnown RBP12.7□□□□□ -0.38
CDS1YBR029C RQC2Q12532 1038 aaKnown RBP12.69□□□□□ -0.38
CDS1YBR029C YCK3P39962 524 aa12.68□□□□□ -0.38
CDS1YBR029C RPG1P38249 964 aaKnown RBP12.67□□□□□ -0.38
CDS1YBR029C RPL17AP05740 184 aaKnown RBP12.47□□□□□ -0.41
CDS1YBR029C RPL17BP46990 184 aaKnown RBP12.47□□□□□ -0.41
CDS1YBR029C REB1P21538 810 aa12.31□□□□□ -0.44
CDS1YBR029C TSR3Q12094 313 aaKnown RBP12.3□□□□□ -0.44
CDS1YBR029C PTP3P40048 928 aa11.97□□□□□ -0.49
CDS1YBR029C RIM101P33400 625 aa11.95□□□□□ -0.5
CDS1YBR029C SPT21P35209 758 aa11.95□□□□□ -0.5
CDS1YBR029C MRPL32P25348 183 aa11.92□□□□□ -0.5
CDS1YBR029C DMA1P38823 416 aa11.84□□□□□ -0.51
CDS1YBR029C SSP1P38871 571 aa11.73□□□□□ -0.53
CDS1YBR029C YGL015CP33199 130 aa11.65□□□□□ -0.55
CDS1YBR029C OXP1P28273 1286 aa11.59□□□□□ -0.55
CDS1YBR029C YAH1Q12184 172 aaKnown RBP11.57□□□□□ -0.56
CDS1YBR029C YIL055CP40523 627 aaKnown RBP11.56□□□□□ -0.56
CDS1YBR029C ARP8Q12386 881 aaKnown RBP RIP-Chip data11.54□□□□□ -0.56not detected
CDS1YBR029C YKR023WP36119 530 aaKnown RBP11.47□□□□□ -0.57
CDS1YBR029C YLR271WQ06152 274 aa11.39□□□□□ -0.59
CDS1YBR029C RSM7P47150 247 aa11.31□□□□□ -0.6
CDS1YBR029C HOP09932 586 aa11.28□□□□□ -0.6
CDS1YBR029C TFC8Q12308 588 aa11.27□□□□□ -0.61
CDS1YBR029C MGA2P40578 1113 aa11.26□□□□□ -0.61
CDS1YBR029C DCD1P06773 312 aa11.16□□□□□ -0.62
CDS1YBR029C CDC27P38042 758 aa11.13□□□□□ -0.63
CDS1YBR029C AI2P03876 854 aa11.06□□□□□ -0.64
CDS1YBR029C LEO1P38439 464 aa11.06□□□□□ -0.64
CDS1YBR029C CST9Q06032 482 aa11.06□□□□□ -0.64
CDS1YBR029C UBP10P53874 792 aaPredicted RBP11.05□□□□□ -0.64
CDS1YBR029C TAF7Q05021 590 aa11.04□□□□□ -0.64
CDS1YBR029C BBC1P47068 1157 aa11.02□□□□□ -0.65
CDS1YBR029C PSD2P53037 1138 aaKnown RBP11.01□□□□□ -0.65
CDS1YBR029C SAS10Q12136 610 aaPredicted RBP10.98□□□□□ -0.65
CDS1YBR029C BCH2P36122 765 aa10.96□□□□□ -0.65
CDS1YBR029C BUD31P25337 157 aaPredicted RBP10.95□□□□□ -0.66
CDS1YBR029C MAP2P38174 421 aaKnown RBP10.87□□□□□ -0.67
CDS1YBR029C LEU3P08638 886 aa10.84□□□□□ -0.67
CDS1YBR029C EPS1P40557 701 aa10.83□□□□□ -0.68
CDS1YBR029C MRM1P25270 412 aa10.76□□□□□ -0.69
CDS1YBR029C RAM2P29703 316 aa10.73□□□□□ -0.69
CDS1YBR029C BDF1P35817 686 aa10.73□□□□□ -0.69
CDS1YBR029C SCY1P53009 804 aa10.7□□□□□ -0.7
CDS1YBR029C SET1P38827 1080 aaKnown RBP10.69□□□□□ -0.7
CDS1YBR029C RTG3P38165 486 aa10.67□□□□□ -0.7
CDS1YBR029C RCR1P38212 213 aa10.63□□□□□ -0.71
CDS1YBR029C SPB4P25808 606 aaPredicted RBP10.6□□□□□ -0.71
CDS1YBR029C IFH1P39520 1085 aa10.6□□□□□ -0.71
CDS1YBR029C TIF4632P39936 914 aaKnown RBP10.59□□□□□ -0.71
CDS1YBR029C CKB1P43639 278 aa10.59□□□□□ -0.71
CDS1YBR029C VPS70P47161 811 aa10.58□□□□□ -0.72
CDS1YBR029C RPN1P38764 993 aaKnown RBP10.56□□□□□ -0.72
CDS1YBR029C TGL3P40308 642 aa10.56□□□□□ -0.72
CDS1YBR029C MAK11P20484 414 aaKnown RBP10.55□□□□□ -0.72
CDS1YBR029C YPR148CQ06523 435 aa10.52□□□□□ -0.72
CDS1YBR029C SLX5P32828 619 aaKnown RBP10.5□□□□□ -0.73
CDS1YBR029C UBP9P39967 754 aa10.44□□□□□ -0.74
CDS1YBR029C VPS29P38759 282 aa10.43□□□□□ -0.74
CDS1YBR029C COQ8P27697 501 aa10.39□□□□□ -0.75
CDS1YBR029C YMR1P47147 688 aaKnown RBP RIP-Chip data10.39□□□□□ -0.75not detected
CDS1YBR029C MIF2P35201 549 aa10.35□□□□□ -0.75
CDS1YBR029C PBS2P08018 668 aa10.34□□□□□ -0.75
CDS1YBR029C NOP53Q12080 455 aaKnown RBP10.34□□□□□ -0.75
CDS1YBR029C SIS1P25294 352 aaKnown RBP10.33□□□□□ -0.76
CDS1YBR029C DSF2P38213 736 aa10.31□□□□□ -0.76
CDS1YBR029C DMA2P53924 522 aa10.31□□□□□ -0.76
CDS1YBR029C DBP1P24784 617 aaKnown RBP10.29□□□□□ -0.76
CDS1YBR029C STS1P38637 319 aa10.26□□□□□ -0.77
CDS1YBR029C YFR006WP43590 535 aa10.26□□□□□ -0.77
CDS1YBR029C YOR238WQ08634 303 aa10.25□□□□□ -0.77
CDS1YBR029C REF2P42073 533 aaPredicted RBP10.23□□□□□ -0.77
CDS1YBR029C EDS1P38073 919 aa10.22□□□□□ -0.77
CDS1YBR029C MAM3Q12296 706 aa10.22□□□□□ -0.77
CDS1YBR029C YNR021WP53723 404 aaKnown RBP10.2□□□□□ -0.78
CDS1YBR029C PTC3P34221 468 aaKnown RBP10.15□□□□□ -0.78
CDS1YBR029C KIN1P13185 1064 aa10.14□□□□□ -0.79
CDS1YBR029C IES2P40154 320 aa10.14□□□□□ -0.79
CDS1YBR029C YAP5P40574 245 aa10.14□□□□□ -0.79
CDS1YBR029C MAK21Q12176 1025 aaKnown RBP10.13□□□□□ -0.79
CDS1YBR029C PIB1Q06651 286 aa10.12□□□□□ -0.79
CDS1YBR029C NSR1P27476 414 aaKnown RBP RIP-Chip data10.11□□□□□ -0.79not detected
CDS1YBR029C GLC3P32775 704 aa10.1□□□□□ -0.79
CDS1YBR029C COX6P00427 148 aa10.08□□□□□ -0.8
CDS1YBR029C AIM7Q12156 149 aa10.08□□□□□ -0.8
CDS1YBR029C HGH1P48362 394 aaKnown RBP10.07□□□□□ -0.8
CDS1YBR029C MST1P07236 462 aa10.05□□□□□ -0.8
CDS1YBR029C DIT2P21595 489 aa10.05□□□□□ -0.8
Retrieved 100 of 5,963 RNA–protein pairs in 42.4 ms