Protein–RNA interactions for Protein: P22894

MMP8, Neutrophil collagenase, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP8P22894 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC26.17■■□□□ 1.78
MMP8P22894 METRNL-202ENST00000570778 967 ntTSL 5 BASIC26.17■■□□□ 1.78
MMP8P22894 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
MMP8P22894 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
MMP8P22894 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
MMP8P22894 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
MMP8P22894 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC26.16■■□□□ 1.78
MMP8P22894 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC26.16■■□□□ 1.78
MMP8P22894 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
MMP8P22894 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
MMP8P22894 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
MMP8P22894 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC26.15■■□□□ 1.78
MMP8P22894 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
MMP8P22894 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
MMP8P22894 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
MMP8P22894 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC26.14■■□□□ 1.77
MMP8P22894 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC26.14■■□□□ 1.77
MMP8P22894 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC26.14■■□□□ 1.77
MMP8P22894 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
MMP8P22894 PVT1-219ENST00000523427 938 ntTSL 3 BASIC26.13■■□□□ 1.77
MMP8P22894 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC26.13■■□□□ 1.77
MMP8P22894 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC26.13■■□□□ 1.77
MMP8P22894 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC26.13■■□□□ 1.77
MMP8P22894 AC142472.1-201ENST00000612013 1741 ntBASIC26.13■■□□□ 1.77
MMP8P22894 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
MMP8P22894 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC26.12■■□□□ 1.77
MMP8P22894 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
MMP8P22894 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
MMP8P22894 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
MMP8P22894 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
MMP8P22894 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC26.11■■□□□ 1.77
MMP8P22894 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC26.11■■□□□ 1.77
MMP8P22894 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC26.1■■□□□ 1.77
MMP8P22894 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
MMP8P22894 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC26.1■■□□□ 1.77
MMP8P22894 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC26.1■■□□□ 1.77
MMP8P22894 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
MMP8P22894 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
MMP8P22894 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC26.08■■□□□ 1.77
MMP8P22894 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC26.08■■□□□ 1.77
MMP8P22894 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
MMP8P22894 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
MMP8P22894 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC26.08■■□□□ 1.77
MMP8P22894 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC26.08■■□□□ 1.77
MMP8P22894 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC26.08■■□□□ 1.76
MMP8P22894 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC26.07■■□□□ 1.76
MMP8P22894 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC26.07■■□□□ 1.76
MMP8P22894 MED25-210ENST00000612854 801 ntTSL 5 BASIC26.07■■□□□ 1.76
MMP8P22894 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
MMP8P22894 MED25-214ENST00000622402 642 ntTSL 5 BASIC26.07■■□□□ 1.76
MMP8P22894 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC26.07■■□□□ 1.76
MMP8P22894 CREM-210ENST00000374721 2020 ntTSL 5 BASIC26.07■■□□□ 1.76
MMP8P22894 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC26.06■■□□□ 1.76
MMP8P22894 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC26.06■■□□□ 1.76
MMP8P22894 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC26.06■■□□□ 1.76
MMP8P22894 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC26.06■■□□□ 1.76
MMP8P22894 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC26.06■■□□□ 1.76
MMP8P22894 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC26.06■■□□□ 1.76
MMP8P22894 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC26.05■■□□□ 1.76
MMP8P22894 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
MMP8P22894 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC26.05■■□□□ 1.76
MMP8P22894 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
MMP8P22894 MIR639-201ENST00000384974 98 ntBASIC26.05■■□□□ 1.76
MMP8P22894 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC26.05■■□□□ 1.76
MMP8P22894 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC26.04■■□□□ 1.76
MMP8P22894 AL359258.2-201ENST00000564063 1566 ntBASIC26.04■■□□□ 1.76
MMP8P22894 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
MMP8P22894 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC26.04■■□□□ 1.76
MMP8P22894 RPS2-202ENST00000526522 924 ntTSL 2 BASIC26.04■■□□□ 1.76
MMP8P22894 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC26.04■■□□□ 1.76
MMP8P22894 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC26.03■■□□□ 1.76
MMP8P22894 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
MMP8P22894 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC26.03■■□□□ 1.76
MMP8P22894 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC26.03■■□□□ 1.76
MMP8P22894 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC26.03■■□□□ 1.76
MMP8P22894 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
MMP8P22894 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC26.02■■□□□ 1.76
MMP8P22894 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
MMP8P22894 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC26.01■■□□□ 1.75
MMP8P22894 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
MMP8P22894 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC26.01■■□□□ 1.75
MMP8P22894 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC26■■□□□ 1.75
MMP8P22894 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
MMP8P22894 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC25.99■■□□□ 1.75
MMP8P22894 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC25.98■■□□□ 1.75
MMP8P22894 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC25.98■■□□□ 1.75
MMP8P22894 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
MMP8P22894 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
MMP8P22894 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
MMP8P22894 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
MMP8P22894 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC25.96■■□□□ 1.75
MMP8P22894 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
MMP8P22894 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC25.96■■□□□ 1.75
MMP8P22894 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC25.96■■□□□ 1.75
MMP8P22894 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC25.96■■□□□ 1.75
MMP8P22894 AC091060.1-201ENST00000623524 1766 ntBASIC25.96■■□□□ 1.75
MMP8P22894 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC25.95■■□□□ 1.75
MMP8P22894 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC25.95■■□□□ 1.74
MMP8P22894 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC25.95■■□□□ 1.74
MMP8P22894 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC25.95■■□□□ 1.74
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms