Protein–RNA interactions for Protein: P00395

MT-CO1, Cytochrome c oxidase subunit 1, humanhuman

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-CO1P00395 LINC01003-201ENST00000564834 1764 ntBASIC25.36■■□□□ 1.65
MT-CO1P00395 AC142086.6-201ENST00000621154 1765 ntBASIC25.36■■□□□ 1.65
MT-CO1P00395 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC25.35■■□□□ 1.65
MT-CO1P00395 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
MT-CO1P00395 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
MT-CO1P00395 AL157400.5-201ENST00000507624 621 ntBASIC25.34■■□□□ 1.65
MT-CO1P00395 MOB2-207ENST00000614710 705 ntTSL 5 BASIC25.34■■□□□ 1.65
MT-CO1P00395 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
MT-CO1P00395 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC25.33■■□□□ 1.65
MT-CO1P00395 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
MT-CO1P00395 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC25.33■■□□□ 1.65
MT-CO1P00395 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
MT-CO1P00395 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC25.33■■□□□ 1.65
MT-CO1P00395 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.64
MT-CO1P00395 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC25.32■■□□□ 1.64
MT-CO1P00395 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
MT-CO1P00395 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
MT-CO1P00395 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC25.31■■□□□ 1.64
MT-CO1P00395 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC25.31■■□□□ 1.64
MT-CO1P00395 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC25.31■■□□□ 1.64
MT-CO1P00395 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC25.3■■□□□ 1.64
MT-CO1P00395 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC25.3■■□□□ 1.64
MT-CO1P00395 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC25.3■■□□□ 1.64
MT-CO1P00395 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
MT-CO1P00395 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC25.29■■□□□ 1.64
MT-CO1P00395 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC25.29■■□□□ 1.64
MT-CO1P00395 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
MT-CO1P00395 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC25.29■■□□□ 1.64
MT-CO1P00395 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
MT-CO1P00395 ECEL1P2-201ENST00000461596 1295 ntBASIC25.28■■□□□ 1.64
MT-CO1P00395 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
MT-CO1P00395 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC25.28■■□□□ 1.64
MT-CO1P00395 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
MT-CO1P00395 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC25.27■■□□□ 1.64
MT-CO1P00395 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC25.27■■□□□ 1.64
MT-CO1P00395 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC25.27■■□□□ 1.64
MT-CO1P00395 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC25.27■■□□□ 1.64
MT-CO1P00395 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
MT-CO1P00395 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC25.26■■□□□ 1.63
MT-CO1P00395 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC25.26■■□□□ 1.63
MT-CO1P00395 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC25.26■■□□□ 1.63
MT-CO1P00395 WHAMMP3-201ENST00000611636 1609 ntBASIC25.26■■□□□ 1.63
MT-CO1P00395 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
MT-CO1P00395 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
MT-CO1P00395 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC25.24■■□□□ 1.63
MT-CO1P00395 BX255925.1-201ENST00000566954 1854 ntBASIC25.24■■□□□ 1.63
MT-CO1P00395 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
MT-CO1P00395 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC25.24■■□□□ 1.63
MT-CO1P00395 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
MT-CO1P00395 ABHD17AP5-201ENST00000580133 923 ntBASIC25.24■■□□□ 1.63
MT-CO1P00395 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC25.24■■□□□ 1.63
MT-CO1P00395 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC25.23■■□□□ 1.63
MT-CO1P00395 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
MT-CO1P00395 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
MT-CO1P00395 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC25.23■■□□□ 1.63
MT-CO1P00395 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC25.22■■□□□ 1.63
MT-CO1P00395 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC25.22■■□□□ 1.63
MT-CO1P00395 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
MT-CO1P00395 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC25.22■■□□□ 1.63
MT-CO1P00395 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC25.22■■□□□ 1.63
MT-CO1P00395 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC25.22■■□□□ 1.63
MT-CO1P00395 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC25.21■■□□□ 1.63
MT-CO1P00395 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC25.21■■□□□ 1.63
MT-CO1P00395 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
MT-CO1P00395 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC25.21■■□□□ 1.63
MT-CO1P00395 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC25.2■■□□□ 1.63
MT-CO1P00395 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
MT-CO1P00395 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC25.2■■□□□ 1.62
MT-CO1P00395 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC25.19■■□□□ 1.62
MT-CO1P00395 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
MT-CO1P00395 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
MT-CO1P00395 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC25.19■■□□□ 1.62
MT-CO1P00395 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC25.18■■□□□ 1.62
MT-CO1P00395 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC25.18■■□□□ 1.62
MT-CO1P00395 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
MT-CO1P00395 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
MT-CO1P00395 SMPD5-203ENST00000639008 1464 ntBASIC25.17■■□□□ 1.62
MT-CO1P00395 AL449106.1-201ENST00000608517 1980 ntBASIC25.17■■□□□ 1.62
MT-CO1P00395 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
MT-CO1P00395 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC25.17■■□□□ 1.62
MT-CO1P00395 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC25.16■■□□□ 1.62
MT-CO1P00395 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC25.16■■□□□ 1.62
MT-CO1P00395 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC25.16■■□□□ 1.62
MT-CO1P00395 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
MT-CO1P00395 HYI-213ENST00000583037 1322 ntTSL 5 BASIC25.15■■□□□ 1.62
MT-CO1P00395 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
MT-CO1P00395 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
MT-CO1P00395 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
MT-CO1P00395 AC025884.2-201ENST00000553429 711 ntBASIC25.14■■□□□ 1.62
MT-CO1P00395 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
MT-CO1P00395 AL359504.2-201ENST00000605506 1601 ntBASIC25.14■■□□□ 1.61
MT-CO1P00395 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC25.14■■□□□ 1.61
MT-CO1P00395 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC25.13■■□□□ 1.61
MT-CO1P00395 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC25.13■■□□□ 1.61
MT-CO1P00395 U85056.1-201ENST00000616429 682 ntBASIC25.13■■□□□ 1.61
MT-CO1P00395 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
MT-CO1P00395 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC25.12■■□□□ 1.61
MT-CO1P00395 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
MT-CO1P00395 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC25.12■■□□□ 1.61
MT-CO1P00395 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC25.12■■□□□ 1.61
Retrieved 100 of 98,524 protein–RNA pairs in 10.5 ms