Protein–RNA interactions for Protein: O95395

GCNT3, Beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase 3, humanhuman

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GCNT3O95395 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
GCNT3O95395 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
GCNT3O95395 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC27.37■■□□□ 1.97
GCNT3O95395 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
GCNT3O95395 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC27.37■■□□□ 1.97
GCNT3O95395 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
GCNT3O95395 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
GCNT3O95395 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC27.37■■□□□ 1.97
GCNT3O95395 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC27.37■■□□□ 1.97
GCNT3O95395 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC27.37■■□□□ 1.97
GCNT3O95395 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC27.37■■□□□ 1.97
GCNT3O95395 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
GCNT3O95395 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC27.36■■□□□ 1.97
GCNT3O95395 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC27.35■■□□□ 1.97
GCNT3O95395 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
GCNT3O95395 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
GCNT3O95395 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC27.35■■□□□ 1.97
GCNT3O95395 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
GCNT3O95395 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC27.34■■□□□ 1.97
GCNT3O95395 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
GCNT3O95395 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
GCNT3O95395 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
GCNT3O95395 MIR4449-201ENST00000578365 66 ntBASIC27.34■■□□□ 1.97
GCNT3O95395 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC27.34■■□□□ 1.97
GCNT3O95395 MED25-210ENST00000612854 801 ntTSL 5 BASIC27.34■■□□□ 1.97
GCNT3O95395 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
GCNT3O95395 MED25-214ENST00000622402 642 ntTSL 5 BASIC27.34■■□□□ 1.97
GCNT3O95395 PKM-203ENST00000389093 2279 ntTSL 5 BASIC27.34■■□□□ 1.97
GCNT3O95395 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC27.34■■□□□ 1.97
GCNT3O95395 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
GCNT3O95395 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
GCNT3O95395 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC27.33■■□□□ 1.97
GCNT3O95395 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC27.32■■□□□ 1.96
GCNT3O95395 AL359258.2-201ENST00000564063 1566 ntBASIC27.32■■□□□ 1.96
GCNT3O95395 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC27.32■■□□□ 1.96
GCNT3O95395 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC27.32■■□□□ 1.96
GCNT3O95395 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC27.32■■□□□ 1.96
GCNT3O95395 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
GCNT3O95395 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC27.31■■□□□ 1.96
GCNT3O95395 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC27.31■■□□□ 1.96
GCNT3O95395 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC27.31■■□□□ 1.96
GCNT3O95395 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
GCNT3O95395 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC27.3■■□□□ 1.96
GCNT3O95395 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
GCNT3O95395 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC27.28■■□□□ 1.96
GCNT3O95395 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
GCNT3O95395 TPT1-202ENST00000379055 948 ntTSL 2 BASIC27.28■■□□□ 1.96
GCNT3O95395 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
GCNT3O95395 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC27.28■■□□□ 1.96
GCNT3O95395 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
GCNT3O95395 AP004609.3-201ENST00000610705 1884 ntBASIC27.27■■□□□ 1.96
GCNT3O95395 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC27.27■■□□□ 1.96
GCNT3O95395 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC27.27■■□□□ 1.96
GCNT3O95395 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC27.27■■□□□ 1.96
GCNT3O95395 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
GCNT3O95395 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC27.27■■□□□ 1.96
GCNT3O95395 AC126177.7-201ENST00000547904 679 ntBASIC27.27■■□□□ 1.96
GCNT3O95395 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.96
GCNT3O95395 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.96
GCNT3O95395 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
GCNT3O95395 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
GCNT3O95395 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
GCNT3O95395 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC27.26■■□□□ 1.95
GCNT3O95395 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC27.26■■□□□ 1.95
GCNT3O95395 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
GCNT3O95395 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC27.25■■□□□ 1.95
GCNT3O95395 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC27.25■■□□□ 1.95
GCNT3O95395 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
GCNT3O95395 SRP68-213ENST00000629930 165 ntTSL 5 BASIC27.24■■□□□ 1.95
GCNT3O95395 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
GCNT3O95395 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC27.24■■□□□ 1.95
GCNT3O95395 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
GCNT3O95395 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
GCNT3O95395 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
GCNT3O95395 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC27.23■■□□□ 1.95
GCNT3O95395 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC27.23■■□□□ 1.95
GCNT3O95395 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
GCNT3O95395 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC27.22■■□□□ 1.95
GCNT3O95395 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
GCNT3O95395 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC27.22■■□□□ 1.95
GCNT3O95395 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC27.22■■□□□ 1.95
GCNT3O95395 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
GCNT3O95395 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC27.21■■□□□ 1.95
GCNT3O95395 AC142472.1-201ENST00000612013 1741 ntBASIC27.21■■□□□ 1.95
GCNT3O95395 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
GCNT3O95395 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC27.2■■□□□ 1.95
GCNT3O95395 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.95
GCNT3O95395 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
GCNT3O95395 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
GCNT3O95395 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC27.2■■□□□ 1.94
GCNT3O95395 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC27.2■■□□□ 1.94
GCNT3O95395 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC27.2■■□□□ 1.94
GCNT3O95395 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
GCNT3O95395 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC27.19■■□□□ 1.94
GCNT3O95395 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC27.18■■□□□ 1.94
GCNT3O95395 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC27.18■■□□□ 1.94
GCNT3O95395 AC060814.1-201ENST00000554326 538 ntBASIC27.17■■□□□ 1.94
GCNT3O95395 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
GCNT3O95395 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC27.17■■□□□ 1.94
GCNT3O95395 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC27.16■■□□□ 1.94
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms