Protein–RNA interactions for Protein: O60391

GRIN3B, Glutamate receptor ionotropic, NMDA 3B, humanhuman

Predictions only

Length 1,043 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIN3BO60391 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC31.04■■■□□ 2.56
GRIN3BO60391 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC31.04■■■□□ 2.56
GRIN3BO60391 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
GRIN3BO60391 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC31.04■■■□□ 2.56
GRIN3BO60391 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC31.03■■■□□ 2.56
GRIN3BO60391 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC31.02■■■□□ 2.56
GRIN3BO60391 MEST-211ENST00000437945 1455 ntTSL 5 BASIC31.02■■■□□ 2.56
GRIN3BO60391 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC31.02■■■□□ 2.56
GRIN3BO60391 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC31.02■■■□□ 2.56
GRIN3BO60391 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC31.02■■■□□ 2.56
GRIN3BO60391 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC31.02■■■□□ 2.56
GRIN3BO60391 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC31.01■■■□□ 2.56
GRIN3BO60391 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC31.01■■■□□ 2.55
GRIN3BO60391 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC31.01■■■□□ 2.55
GRIN3BO60391 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC31.01■■■□□ 2.55
GRIN3BO60391 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC31.01■■■□□ 2.55
GRIN3BO60391 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC31■■■□□ 2.55
GRIN3BO60391 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC31■■■□□ 2.55
GRIN3BO60391 MIR3960-201ENST00000583311 91 ntBASIC31■■■□□ 2.55
GRIN3BO60391 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC30.99■■■□□ 2.55
GRIN3BO60391 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC30.99■■■□□ 2.55
GRIN3BO60391 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC30.99■■■□□ 2.55
GRIN3BO60391 LONRF2P2-201ENST00000439212 571 ntBASIC30.98■■■□□ 2.55
GRIN3BO60391 PFN2-211ENST00000489155 636 ntTSL 4 BASIC30.98■■■□□ 2.55
GRIN3BO60391 AC019171.1-201ENST00000601251 1056 ntBASIC30.98■■■□□ 2.55
GRIN3BO60391 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
GRIN3BO60391 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC30.97■■■□□ 2.55
GRIN3BO60391 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC30.97■■■□□ 2.55
GRIN3BO60391 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC30.96■■■□□ 2.55
GRIN3BO60391 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC30.96■■■□□ 2.55
GRIN3BO60391 KRT125P-201ENST00000546827 989 ntBASIC30.96■■■□□ 2.55
GRIN3BO60391 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC30.96■■■□□ 2.55
GRIN3BO60391 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC30.95■■■□□ 2.55
GRIN3BO60391 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC30.95■■■□□ 2.55
GRIN3BO60391 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC30.95■■■□□ 2.55
GRIN3BO60391 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC30.95■■■□□ 2.55
GRIN3BO60391 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC30.95■■■□□ 2.54
GRIN3BO60391 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC30.95■■■□□ 2.54
GRIN3BO60391 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
GRIN3BO60391 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC30.94■■■□□ 2.54
GRIN3BO60391 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC30.94■■■□□ 2.54
GRIN3BO60391 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
GRIN3BO60391 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC30.93■■■□□ 2.54
GRIN3BO60391 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC30.93■■■□□ 2.54
GRIN3BO60391 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC30.93■■■□□ 2.54
GRIN3BO60391 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC30.93■■■□□ 2.54
GRIN3BO60391 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC30.92■■■□□ 2.54
GRIN3BO60391 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC30.92■■■□□ 2.54
GRIN3BO60391 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC30.91■■■□□ 2.54
GRIN3BO60391 MIR4787-201ENST00000607364 84 ntBASIC30.91■■■□□ 2.54
GRIN3BO60391 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC30.9■■■□□ 2.54
GRIN3BO60391 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC30.9■■■□□ 2.54
GRIN3BO60391 KRT16P3-201ENST00000439127 1283 ntBASIC30.9■■■□□ 2.54
GRIN3BO60391 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
GRIN3BO60391 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC30.89■■■□□ 2.54
GRIN3BO60391 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC30.89■■■□□ 2.54
GRIN3BO60391 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC30.89■■■□□ 2.54
GRIN3BO60391 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC30.89■■■□□ 2.54
GRIN3BO60391 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC30.88■■■□□ 2.53
GRIN3BO60391 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC30.88■■■□□ 2.53
GRIN3BO60391 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC30.88■■■□□ 2.53
GRIN3BO60391 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC30.87■■■□□ 2.53
GRIN3BO60391 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC30.87■■■□□ 2.53
GRIN3BO60391 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC30.87■■■□□ 2.53
GRIN3BO60391 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC30.87■■■□□ 2.53
GRIN3BO60391 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC30.87■■■□□ 2.53
GRIN3BO60391 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC30.87■■■□□ 2.53
GRIN3BO60391 UNC93B8-201ENST00000511903 705 ntBASIC30.87■■■□□ 2.53
GRIN3BO60391 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC30.87■■■□□ 2.53
GRIN3BO60391 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC30.86■■■□□ 2.53
GRIN3BO60391 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC30.86■■■□□ 2.53
GRIN3BO60391 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC30.86■■■□□ 2.53
GRIN3BO60391 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC30.86■■■□□ 2.53
GRIN3BO60391 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC30.85■■■□□ 2.53
GRIN3BO60391 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC30.85■■■□□ 2.53
GRIN3BO60391 AC005837.3-201ENST00000612163 286 ntBASIC30.85■■■□□ 2.53
GRIN3BO60391 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC30.84■■■□□ 2.53
GRIN3BO60391 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC30.84■■■□□ 2.53
GRIN3BO60391 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC30.84■■■□□ 2.53
GRIN3BO60391 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC30.84■■■□□ 2.53
GRIN3BO60391 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC30.84■■■□□ 2.53
GRIN3BO60391 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
GRIN3BO60391 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
GRIN3BO60391 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC30.83■■■□□ 2.53
GRIN3BO60391 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC30.83■■■□□ 2.53
GRIN3BO60391 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC30.82■■■□□ 2.52
GRIN3BO60391 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC30.82■■■□□ 2.52
GRIN3BO60391 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC30.82■■■□□ 2.52
GRIN3BO60391 BX664725.1-201ENST00000438252 379 ntBASIC30.82■■■□□ 2.52
GRIN3BO60391 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC30.82■■■□□ 2.52
GRIN3BO60391 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC30.81■■■□□ 2.52
GRIN3BO60391 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC30.81■■■□□ 2.52
GRIN3BO60391 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
GRIN3BO60391 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC30.8■■■□□ 2.52
GRIN3BO60391 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
GRIN3BO60391 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC30.79■■■□□ 2.52
GRIN3BO60391 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC30.79■■■□□ 2.52
GRIN3BO60391 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC30.79■■■□□ 2.52
GRIN3BO60391 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC30.79■■■□□ 2.52
GRIN3BO60391 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC30.79■■■□□ 2.52
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms