Protein–RNA interactions for Protein: A6NL88

SHISA7, Protein shisa-7, humanhuman

Predictions only

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA7A6NL88 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
SHISA7A6NL88 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC25.44■■□□□ 1.66
SHISA7A6NL88 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC25.44■■□□□ 1.66
SHISA7A6NL88 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC25.43■■□□□ 1.66
SHISA7A6NL88 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
SHISA7A6NL88 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC25.43■■□□□ 1.66
SHISA7A6NL88 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
SHISA7A6NL88 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC25.42■■□□□ 1.66
SHISA7A6NL88 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
SHISA7A6NL88 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
SHISA7A6NL88 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC25.42■■□□□ 1.66
SHISA7A6NL88 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC25.42■■□□□ 1.66
SHISA7A6NL88 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC25.42■■□□□ 1.66
SHISA7A6NL88 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
SHISA7A6NL88 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
SHISA7A6NL88 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC25.41■■□□□ 1.66
SHISA7A6NL88 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
SHISA7A6NL88 MIR6765-201ENST00000614092 87 ntBASIC25.41■■□□□ 1.66
SHISA7A6NL88 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC25.4■■□□□ 1.66
SHISA7A6NL88 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
SHISA7A6NL88 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC25.39■■□□□ 1.66
SHISA7A6NL88 MIR3960-201ENST00000583311 91 ntBASIC25.39■■□□□ 1.66
SHISA7A6NL88 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
SHISA7A6NL88 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC25.38■■□□□ 1.65
SHISA7A6NL88 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
SHISA7A6NL88 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
SHISA7A6NL88 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
SHISA7A6NL88 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
SHISA7A6NL88 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC25.37■■□□□ 1.65
SHISA7A6NL88 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC25.37■■□□□ 1.65
SHISA7A6NL88 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC25.37■■□□□ 1.65
SHISA7A6NL88 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC25.37■■□□□ 1.65
SHISA7A6NL88 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC25.37■■□□□ 1.65
SHISA7A6NL88 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC25.36■■□□□ 1.65
SHISA7A6NL88 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC25.36■■□□□ 1.65
SHISA7A6NL88 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC25.36■■□□□ 1.65
SHISA7A6NL88 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC25.36■■□□□ 1.65
SHISA7A6NL88 HES6-204ENST00000409182 863 ntTSL 2 BASIC25.36■■□□□ 1.65
SHISA7A6NL88 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
SHISA7A6NL88 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC25.36■■□□□ 1.65
SHISA7A6NL88 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC25.35■■□□□ 1.65
SHISA7A6NL88 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC25.35■■□□□ 1.65
SHISA7A6NL88 MTURN-203ENST00000409688 843 ntTSL 2 BASIC25.35■■□□□ 1.65
SHISA7A6NL88 GUSBP5-201ENST00000418136 578 ntBASIC25.35■■□□□ 1.65
SHISA7A6NL88 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC25.35■■□□□ 1.65
SHISA7A6NL88 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC25.35■■□□□ 1.65
SHISA7A6NL88 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
SHISA7A6NL88 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
SHISA7A6NL88 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC25.34■■□□□ 1.65
SHISA7A6NL88 AC139795.1-202ENST00000500444 432 ntBASIC25.34■■□□□ 1.65
SHISA7A6NL88 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
SHISA7A6NL88 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC25.33■■□□□ 1.65
SHISA7A6NL88 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
SHISA7A6NL88 OR2A1-AS1-204ENST00000470435 602 ntBASIC25.33■■□□□ 1.65
SHISA7A6NL88 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC25.33■■□□□ 1.65
SHISA7A6NL88 MIR4508-201ENST00000584178 70 ntBASIC25.33■■□□□ 1.65
SHISA7A6NL88 ABCB10P3-201ENST00000561950 2166 ntBASIC25.32■■□□□ 1.64
SHISA7A6NL88 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
SHISA7A6NL88 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
SHISA7A6NL88 IDNK-201ENST00000376417 511 ntTSL 5 BASIC25.32■■□□□ 1.64
SHISA7A6NL88 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
SHISA7A6NL88 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC25.32■■□□□ 1.64
SHISA7A6NL88 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
SHISA7A6NL88 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC25.32■■□□□ 1.64
SHISA7A6NL88 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC25.32■■□□□ 1.64
SHISA7A6NL88 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC25.32■■□□□ 1.64
SHISA7A6NL88 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
SHISA7A6NL88 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC25.31■■□□□ 1.64
SHISA7A6NL88 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
SHISA7A6NL88 YBX1P4-201ENST00000392794 808 ntBASIC25.31■■□□□ 1.64
SHISA7A6NL88 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC25.31■■□□□ 1.64
SHISA7A6NL88 AL139393.2-201ENST00000608721 2025 ntBASIC25.3■■□□□ 1.64
SHISA7A6NL88 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC25.3■■□□□ 1.64
SHISA7A6NL88 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
SHISA7A6NL88 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
SHISA7A6NL88 AP002414.2-202ENST00000590929 1450 ntBASIC25.29■■□□□ 1.64
SHISA7A6NL88 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC25.29■■□□□ 1.64
SHISA7A6NL88 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC25.29■■□□□ 1.64
SHISA7A6NL88 IDNK-203ENST00000405990 629 ntTSL 2 BASIC25.29■■□□□ 1.64
SHISA7A6NL88 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC25.29■■□□□ 1.64
SHISA7A6NL88 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
SHISA7A6NL88 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC25.28■■□□□ 1.64
SHISA7A6NL88 THA1P-201ENST00000590384 1145 ntBASIC25.28■■□□□ 1.64
SHISA7A6NL88 AC018755.3-202ENST00000596210 929 ntBASIC25.28■■□□□ 1.64
SHISA7A6NL88 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC25.27■■□□□ 1.64
SHISA7A6NL88 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC25.27■■□□□ 1.64
SHISA7A6NL88 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
SHISA7A6NL88 AC103724.3-201ENST00000564481 992 ntBASIC25.27■■□□□ 1.64
SHISA7A6NL88 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
SHISA7A6NL88 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC25.27■■□□□ 1.64
SHISA7A6NL88 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC25.26■■□□□ 1.63
SHISA7A6NL88 AC131212.1-201ENST00000613771 668 ntBASIC25.26■■□□□ 1.63
SHISA7A6NL88 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC25.26■■□□□ 1.63
SHISA7A6NL88 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
SHISA7A6NL88 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC25.25■■□□□ 1.63
SHISA7A6NL88 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC25.25■■□□□ 1.63
SHISA7A6NL88 PRTG-204ENST00000561292 833 ntTSL 3 BASIC25.25■■□□□ 1.63
SHISA7A6NL88 AC019069.1-201ENST00000610008 1333 ntBASIC25.25■■□□□ 1.63
SHISA7A6NL88 AL359504.2-201ENST00000605506 1601 ntBASIC25.25■■□□□ 1.63
SHISA7A6NL88 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC25.25■■□□□ 1.63
Retrieved 100 of 98,524 protein–RNA pairs in 14.5 ms