Protein–RNA interactions for Protein: A6NKQ9

CGB1, Choriogonadotropin subunit beta variant 1, humanhuman

Predictions only

Length 187 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CGB1A6NKQ9 DUX4L10-201ENST00000622460 1267 ntBASIC19.7■□□□□ 0.74
CGB1A6NKQ9 DUX4L25-201ENST00000624915 1269 ntBASIC19.7■□□□□ 0.74
CGB1A6NKQ9 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
CGB1A6NKQ9 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
CGB1A6NKQ9 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC19.69■□□□□ 0.74
CGB1A6NKQ9 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC19.68■□□□□ 0.74
CGB1A6NKQ9 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CGB1A6NKQ9 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
CGB1A6NKQ9 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC19.68■□□□□ 0.74
CGB1A6NKQ9 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CGB1A6NKQ9 DUX4L11-201ENST00000611504 1267 ntBASIC19.67■□□□□ 0.74
CGB1A6NKQ9 DUX4L12-201ENST00000614593 1267 ntBASIC19.67■□□□□ 0.74
CGB1A6NKQ9 DUX4L14-201ENST00000621227 1267 ntBASIC19.67■□□□□ 0.74
CGB1A6NKQ9 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC19.67■□□□□ 0.74
CGB1A6NKQ9 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CGB1A6NKQ9 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC19.66■□□□□ 0.74
CGB1A6NKQ9 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CGB1A6NKQ9 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
CGB1A6NKQ9 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CGB1A6NKQ9 AC142472.1-201ENST00000612013 1741 ntBASIC19.65■□□□□ 0.74
CGB1A6NKQ9 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CGB1A6NKQ9 MLEC-202ENST00000412616 841 ntTSL 3 BASIC19.65■□□□□ 0.74
CGB1A6NKQ9 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC19.65■□□□□ 0.74
CGB1A6NKQ9 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CGB1A6NKQ9 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
CGB1A6NKQ9 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
CGB1A6NKQ9 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CGB1A6NKQ9 ZNRF2P2-203ENST00000454624 420 ntBASIC19.64■□□□□ 0.73
CGB1A6NKQ9 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC19.64■□□□□ 0.73
CGB1A6NKQ9 CHST11-202ENST00000546689 756 ntTSL 2 BASIC19.64■□□□□ 0.73
CGB1A6NKQ9 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC19.64■□□□□ 0.73
CGB1A6NKQ9 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC19.63■□□□□ 0.73
CGB1A6NKQ9 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CGB1A6NKQ9 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
CGB1A6NKQ9 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CGB1A6NKQ9 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CGB1A6NKQ9 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CGB1A6NKQ9 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CGB1A6NKQ9 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC19.62■□□□□ 0.73
CGB1A6NKQ9 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CGB1A6NKQ9 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CGB1A6NKQ9 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CGB1A6NKQ9 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
CGB1A6NKQ9 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
CGB1A6NKQ9 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
CGB1A6NKQ9 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CGB1A6NKQ9 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC19.62■□□□□ 0.73
CGB1A6NKQ9 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC19.62■□□□□ 0.73
CGB1A6NKQ9 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
CGB1A6NKQ9 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
CGB1A6NKQ9 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC19.61■□□□□ 0.73
CGB1A6NKQ9 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC19.61■□□□□ 0.73
CGB1A6NKQ9 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC19.61■□□□□ 0.73
CGB1A6NKQ9 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CGB1A6NKQ9 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CGB1A6NKQ9 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CGB1A6NKQ9 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC19.6■□□□□ 0.73
CGB1A6NKQ9 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC19.6■□□□□ 0.73
CGB1A6NKQ9 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
CGB1A6NKQ9 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
CGB1A6NKQ9 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC19.59■□□□□ 0.73
CGB1A6NKQ9 AC145676.1-201ENST00000514988 2004 ntBASIC19.59■□□□□ 0.73
CGB1A6NKQ9 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
CGB1A6NKQ9 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CGB1A6NKQ9 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
CGB1A6NKQ9 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CGB1A6NKQ9 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC19.59■□□□□ 0.73
CGB1A6NKQ9 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
CGB1A6NKQ9 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CGB1A6NKQ9 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CGB1A6NKQ9 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
CGB1A6NKQ9 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC19.58■□□□□ 0.72
CGB1A6NKQ9 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CGB1A6NKQ9 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
CGB1A6NKQ9 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
CGB1A6NKQ9 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
CGB1A6NKQ9 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CGB1A6NKQ9 MIR219A2-201ENST00000608502 1504 ntBASIC19.57■□□□□ 0.72
CGB1A6NKQ9 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CGB1A6NKQ9 AC092803.2-201ENST00000564287 1899 ntBASIC19.57■□□□□ 0.72
CGB1A6NKQ9 HES6-205ENST00000409356 528 ntTSL 2 BASIC19.57■□□□□ 0.72
CGB1A6NKQ9 HLA-V-202ENST00000446817 847 ntBASIC19.57■□□□□ 0.72
CGB1A6NKQ9 AC008813.1-201ENST00000536597 885 ntBASIC19.57■□□□□ 0.72
CGB1A6NKQ9 AC148477.6-201ENST00000623746 465 ntBASIC19.57■□□□□ 0.72
CGB1A6NKQ9 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
CGB1A6NKQ9 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
CGB1A6NKQ9 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC19.57■□□□□ 0.72
CGB1A6NKQ9 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CGB1A6NKQ9 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CGB1A6NKQ9 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CGB1A6NKQ9 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CGB1A6NKQ9 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CGB1A6NKQ9 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CGB1A6NKQ9 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CGB1A6NKQ9 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CGB1A6NKQ9 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CGB1A6NKQ9 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CGB1A6NKQ9 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
CGB1A6NKQ9 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CGB1A6NKQ9 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 57.3 ms