Protein–RNA interactions for Protein: A6NED2

RCCD1, RCC1 domain-containing protein 1, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1A6NED2 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC26.38■■□□□ 1.81
RCCD1A6NED2 AC087741.3-201ENST00000624270 1347 ntBASIC26.38■■□□□ 1.81
RCCD1A6NED2 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
RCCD1A6NED2 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
RCCD1A6NED2 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC26.37■■□□□ 1.81
RCCD1A6NED2 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
RCCD1A6NED2 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC26.36■■□□□ 1.81
RCCD1A6NED2 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
RCCD1A6NED2 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
RCCD1A6NED2 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC26.35■■□□□ 1.81
RCCD1A6NED2 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC26.34■■□□□ 1.81
RCCD1A6NED2 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
RCCD1A6NED2 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC26.34■■□□□ 1.81
RCCD1A6NED2 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC26.34■■□□□ 1.81
RCCD1A6NED2 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC26.34■■□□□ 1.81
RCCD1A6NED2 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC26.34■■□□□ 1.81
RCCD1A6NED2 CEBPA-AS1-201ENST00000592982 2198 ntBASIC26.34■■□□□ 1.81
RCCD1A6NED2 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
RCCD1A6NED2 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
RCCD1A6NED2 WHAMMP3-201ENST00000611636 1609 ntBASIC26.33■■□□□ 1.81
RCCD1A6NED2 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC26.33■■□□□ 1.81
RCCD1A6NED2 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC26.33■■□□□ 1.81
RCCD1A6NED2 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC26.33■■□□□ 1.8
RCCD1A6NED2 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
RCCD1A6NED2 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
RCCD1A6NED2 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
RCCD1A6NED2 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC26.32■■□□□ 1.8
RCCD1A6NED2 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
RCCD1A6NED2 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC26.31■■□□□ 1.8
RCCD1A6NED2 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
RCCD1A6NED2 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC26.31■■□□□ 1.8
RCCD1A6NED2 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC26.31■■□□□ 1.8
RCCD1A6NED2 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC26.3■■□□□ 1.8
RCCD1A6NED2 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
RCCD1A6NED2 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
RCCD1A6NED2 AP006261.1-201ENST00000584783 668 ntBASIC26.3■■□□□ 1.8
RCCD1A6NED2 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC26.3■■□□□ 1.8
RCCD1A6NED2 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
RCCD1A6NED2 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
RCCD1A6NED2 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC26.29■■□□□ 1.8
RCCD1A6NED2 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
RCCD1A6NED2 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC26.29■■□□□ 1.8
RCCD1A6NED2 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
RCCD1A6NED2 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC26.29■■□□□ 1.8
RCCD1A6NED2 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
RCCD1A6NED2 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC26.28■■□□□ 1.8
RCCD1A6NED2 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
RCCD1A6NED2 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC26.27■■□□□ 1.8
RCCD1A6NED2 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC26.27■■□□□ 1.8
RCCD1A6NED2 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC26.27■■□□□ 1.8
RCCD1A6NED2 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
RCCD1A6NED2 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
RCCD1A6NED2 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC26.27■■□□□ 1.8
RCCD1A6NED2 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
RCCD1A6NED2 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC26.26■■□□□ 1.79
RCCD1A6NED2 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC26.26■■□□□ 1.79
RCCD1A6NED2 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC26.26■■□□□ 1.79
RCCD1A6NED2 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC26.25■■□□□ 1.79
RCCD1A6NED2 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
RCCD1A6NED2 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC26.25■■□□□ 1.79
RCCD1A6NED2 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC26.25■■□□□ 1.79
RCCD1A6NED2 AL162393.1-201ENST00000437852 946 ntBASIC26.25■■□□□ 1.79
RCCD1A6NED2 AC093323.1-202ENST00000635031 2045 ntBASIC26.25■■□□□ 1.79
RCCD1A6NED2 ERN1-208ENST00000606895 2068 ntBASIC26.24■■□□□ 1.79
RCCD1A6NED2 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC26.24■■□□□ 1.79
RCCD1A6NED2 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
RCCD1A6NED2 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
RCCD1A6NED2 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
RCCD1A6NED2 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC26.23■■□□□ 1.79
RCCD1A6NED2 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
RCCD1A6NED2 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
RCCD1A6NED2 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC26.22■■□□□ 1.79
RCCD1A6NED2 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
RCCD1A6NED2 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC26.22■■□□□ 1.79
RCCD1A6NED2 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC26.22■■□□□ 1.79
RCCD1A6NED2 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
RCCD1A6NED2 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
RCCD1A6NED2 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
RCCD1A6NED2 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC26.21■■□□□ 1.79
RCCD1A6NED2 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
RCCD1A6NED2 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC26.2■■□□□ 1.79
RCCD1A6NED2 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC26.2■■□□□ 1.78
RCCD1A6NED2 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
RCCD1A6NED2 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
RCCD1A6NED2 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC26.19■■□□□ 1.78
RCCD1A6NED2 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC26.19■■□□□ 1.78
RCCD1A6NED2 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC26.18■■□□□ 1.78
RCCD1A6NED2 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
RCCD1A6NED2 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
RCCD1A6NED2 AC021231.2-201ENST00000594613 730 ntBASIC26.18■■□□□ 1.78
RCCD1A6NED2 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC26.18■■□□□ 1.78
RCCD1A6NED2 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
RCCD1A6NED2 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC26.17■■□□□ 1.78
RCCD1A6NED2 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
RCCD1A6NED2 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC26.17■■□□□ 1.78
RCCD1A6NED2 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
RCCD1A6NED2 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC26.17■■□□□ 1.78
RCCD1A6NED2 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
RCCD1A6NED2 SNAI3-AS1-204ENST00000567997 2048 ntBASIC26.17■■□□□ 1.78
RCCD1A6NED2 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms