Protein–RNA interactions for Protein: A1L4H1

SSC5D, Soluble scavenger receptor cysteine-rich domain-containing protein SSC5D, humanhuman

Predictions only

Length 1,573 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSC5DA1L4H1 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC29.52■■■□□ 2.32
SSC5DA1L4H1 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC29.52■■■□□ 2.32
SSC5DA1L4H1 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC29.52■■■□□ 2.32
SSC5DA1L4H1 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC29.51■■■□□ 2.31
SSC5DA1L4H1 MIR6765-201ENST00000614092 87 ntBASIC29.51■■■□□ 2.31
SSC5DA1L4H1 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC29.5■■■□□ 2.31
SSC5DA1L4H1 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC29.5■■■□□ 2.31
SSC5DA1L4H1 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC29.5■■■□□ 2.31
SSC5DA1L4H1 BHLHE23-202ENST00000612929 1109 ntBASIC29.49■■■□□ 2.31
SSC5DA1L4H1 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC29.48■■■□□ 2.31
SSC5DA1L4H1 MIR3960-201ENST00000583311 91 ntBASIC29.48■■■□□ 2.31
SSC5DA1L4H1 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC29.48■■■□□ 2.31
SSC5DA1L4H1 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC29.47■■■□□ 2.31
SSC5DA1L4H1 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC29.47■■■□□ 2.31
SSC5DA1L4H1 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC29.47■■■□□ 2.31
SSC5DA1L4H1 AC074183.2-201ENST00000623112 922 ntBASIC29.47■■■□□ 2.31
SSC5DA1L4H1 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC29.47■■■□□ 2.31
SSC5DA1L4H1 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC29.47■■■□□ 2.31
SSC5DA1L4H1 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC29.47■■■□□ 2.31
SSC5DA1L4H1 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC29.47■■■□□ 2.31
SSC5DA1L4H1 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC29.46■■■□□ 2.31
SSC5DA1L4H1 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC29.46■■■□□ 2.31
SSC5DA1L4H1 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC29.46■■■□□ 2.31
SSC5DA1L4H1 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC29.46■■■□□ 2.31
SSC5DA1L4H1 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC29.46■■■□□ 2.31
SSC5DA1L4H1 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC29.45■■■□□ 2.31
SSC5DA1L4H1 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC29.45■■■□□ 2.31
SSC5DA1L4H1 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC29.45■■■□□ 2.3
SSC5DA1L4H1 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC29.44■■■□□ 2.3
SSC5DA1L4H1 AC139795.1-202ENST00000500444 432 ntBASIC29.44■■■□□ 2.3
SSC5DA1L4H1 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC29.44■■■□□ 2.3
SSC5DA1L4H1 GUSBP5-201ENST00000418136 578 ntBASIC29.43■■■□□ 2.3
SSC5DA1L4H1 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC29.43■■■□□ 2.3
SSC5DA1L4H1 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
SSC5DA1L4H1 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC29.43■■■□□ 2.3
SSC5DA1L4H1 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
SSC5DA1L4H1 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC29.43■■■□□ 2.3
SSC5DA1L4H1 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC29.43■■■□□ 2.3
SSC5DA1L4H1 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC29.43■■■□□ 2.3
SSC5DA1L4H1 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
SSC5DA1L4H1 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
SSC5DA1L4H1 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
SSC5DA1L4H1 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC29.42■■■□□ 2.3
SSC5DA1L4H1 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC29.41■■■□□ 2.3
SSC5DA1L4H1 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC29.41■■■□□ 2.3
SSC5DA1L4H1 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
SSC5DA1L4H1 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC29.41■■■□□ 2.3
SSC5DA1L4H1 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC29.41■■■□□ 2.3
SSC5DA1L4H1 MIR4508-201ENST00000584178 70 ntBASIC29.41■■■□□ 2.3
SSC5DA1L4H1 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC29.4■■■□□ 2.3
SSC5DA1L4H1 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
SSC5DA1L4H1 HES6-204ENST00000409182 863 ntTSL 2 BASIC29.4■■■□□ 2.3
SSC5DA1L4H1 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
SSC5DA1L4H1 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC29.4■■■□□ 2.3
SSC5DA1L4H1 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC29.39■■■□□ 2.3
SSC5DA1L4H1 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC29.39■■■□□ 2.3
SSC5DA1L4H1 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC29.39■■■□□ 2.3
SSC5DA1L4H1 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC29.39■■■□□ 2.3
SSC5DA1L4H1 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC29.39■■■□□ 2.3
SSC5DA1L4H1 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC29.39■■■□□ 2.29
SSC5DA1L4H1 MTURN-203ENST00000409688 843 ntTSL 2 BASIC29.39■■■□□ 2.29
SSC5DA1L4H1 OR2A1-AS1-204ENST00000470435 602 ntBASIC29.39■■■□□ 2.29
SSC5DA1L4H1 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC29.38■■■□□ 2.29
SSC5DA1L4H1 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC29.38■■■□□ 2.29
SSC5DA1L4H1 AC019069.1-201ENST00000610008 1333 ntBASIC29.38■■■□□ 2.29
SSC5DA1L4H1 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC29.37■■■□□ 2.29
SSC5DA1L4H1 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC29.37■■■□□ 2.29
SSC5DA1L4H1 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC29.37■■■□□ 2.29
SSC5DA1L4H1 YBX1P4-201ENST00000392794 808 ntBASIC29.37■■■□□ 2.29
SSC5DA1L4H1 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC29.37■■■□□ 2.29
SSC5DA1L4H1 ABCB10P3-201ENST00000561950 2166 ntBASIC29.37■■■□□ 2.29
SSC5DA1L4H1 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC29.36■■■□□ 2.29
SSC5DA1L4H1 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC29.35■■■□□ 2.29
SSC5DA1L4H1 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC29.35■■■□□ 2.29
SSC5DA1L4H1 AC131212.1-201ENST00000613771 668 ntBASIC29.35■■■□□ 2.29
SSC5DA1L4H1 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC29.35■■■□□ 2.29
SSC5DA1L4H1 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC29.35■■■□□ 2.29
SSC5DA1L4H1 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC29.35■■■□□ 2.29
SSC5DA1L4H1 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC29.35■■■□□ 2.29
SSC5DA1L4H1 AC103724.3-201ENST00000564481 992 ntBASIC29.35■■■□□ 2.29
SSC5DA1L4H1 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC29.34■■■□□ 2.29
SSC5DA1L4H1 AP002414.2-202ENST00000590929 1450 ntBASIC29.33■■■□□ 2.29
SSC5DA1L4H1 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC29.33■■■□□ 2.29
SSC5DA1L4H1 IDNK-203ENST00000405990 629 ntTSL 2 BASIC29.33■■■□□ 2.29
SSC5DA1L4H1 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC29.32■■■□□ 2.28
SSC5DA1L4H1 THA1P-201ENST00000590384 1145 ntBASIC29.32■■■□□ 2.28
SSC5DA1L4H1 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC29.32■■■□□ 2.28
SSC5DA1L4H1 AL139393.2-201ENST00000608721 2025 ntBASIC29.32■■■□□ 2.28
SSC5DA1L4H1 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
SSC5DA1L4H1 HYI-210ENST00000486909 905 ntTSL 5 BASIC29.31■■■□□ 2.28
SSC5DA1L4H1 IDNK-201ENST00000376417 511 ntTSL 5 BASIC29.3■■■□□ 2.28
SSC5DA1L4H1 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC29.3■■■□□ 2.28
SSC5DA1L4H1 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC29.3■■■□□ 2.28
SSC5DA1L4H1 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC29.3■■■□□ 2.28
SSC5DA1L4H1 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC29.3■■■□□ 2.28
SSC5DA1L4H1 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC29.3■■■□□ 2.28
SSC5DA1L4H1 PRTG-204ENST00000561292 833 ntTSL 3 BASIC29.3■■■□□ 2.28
SSC5DA1L4H1 AC018755.3-202ENST00000596210 929 ntBASIC29.29■■■□□ 2.28
SSC5DA1L4H1 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
SSC5DA1L4H1 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms