Protein–RNA interactions for Protein: Q07955

SRSF1, Serine/arginine-rich splicing factor 1, humanhuman

Known RBP eCLIP

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1Q07955 PAIP2-206ENST00000510409 815 ntTSL 219.11■□□□□ 0.653e-9■□□□□ 10.4
SRSF1Q07955 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC18.84■□□□□ 0.613e-9■□□□□ 10.4
SRSF1Q07955 PAIP2-207ENST00000511381 365 ntTSL 516.56■□□□□ 0.243e-9■□□□□ 10.4
SRSF1Q07955 PAIP2-204ENST00000507755 776 ntTSL 516.37■□□□□ 0.213e-9■□□□□ 10.4
SRSF1Q07955 PAIP2-201ENST00000265192 1459 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.363e-9■□□□□ 10.4
SRSF1Q07955 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.383e-9■□□□□ 10.4
SRSF1Q07955 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.783e-9■□□□□ 10.4
SRSF1Q07955 ARHGEF28-205ENST00000503341 1926 ntTSL 215.26■□□□□ 0.032e-8■□□□□ 10.4
SRSF1Q07955 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -02e-8■□□□□ 10.4
SRSF1Q07955 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.022e-8■□□□□ 10.4
SRSF1Q07955 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.12e-8■□□□□ 10.4
SRSF1Q07955 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC14.36□□□□□ -0.112e-8■□□□□ 10.4
SRSF1Q07955 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC13.09□□□□□ -0.312e-8■□□□□ 10.4
SRSF1Q07955 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC12.58□□□□□ -0.42e-8■□□□□ 10.4
SRSF1Q07955 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC12.08□□□□□ -0.482e-8■□□□□ 10.4
SRSF1Q07955 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.28e-7■□□□□ 10.4
SRSF1Q07955 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.258e-7■□□□□ 10.4
SRSF1Q07955 PACSIN3-204ENST00000528201 864 ntTSL 322.85■■□□□ 1.257e-7■□□□□ 10.4
SRSF1Q07955 PACSIN3-207ENST00000530513 912 ntTSL 322.02■■□□□ 1.127e-7■□□□□ 10.4
SRSF1Q07955 PACSIN3-203ENST00000525725 683 ntTSL 220.5■□□□□ 0.877e-7■□□□□ 10.4
SRSF1Q07955 PACSIN3-205ENST00000528462 1560 ntTSL 219.23■□□□□ 0.677e-7■□□□□ 10.4
SRSF1Q07955 PACSIN3-209ENST00000532457 1845 ntTSL 518.95■□□□□ 0.627e-7■□□□□ 10.4
SRSF1Q07955 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.47e-7■□□□□ 10.4
SRSF1Q07955 PACSIN3-208ENST00000531226 654 ntTSL 517.43■□□□□ 0.387e-7■□□□□ 10.4
SRSF1Q07955 PACSIN3-202ENST00000524509 554 ntTSL 316.82■□□□□ 0.287e-7■□□□□ 10.4
SRSF1Q07955 PACSIN3-206ENST00000530405 563 ntTSL 316.82■□□□□ 0.287e-7■□□□□ 10.4
SRSF1Q07955 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.247e-7■□□□□ 10.4
SRSF1Q07955 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC12.37□□□□□ -0.432e-7■□□□□ 10.4
SRSF1Q07955 CALU-202ENST00000449187 2438 ntAPPRIS ALT1 TSL 1 (best) BASIC11.88□□□□□ -0.512e-7■□□□□ 10.4
SRSF1Q07955 CALU-201ENST00000249364 3357 ntAPPRIS P3 TSL 1 (best) BASIC10.11□□□□□ -0.792e-7■□□□□ 10.4
SRSF1Q07955 CALU-206ENST00000542996 4225 ntTSL 1 (best) BASIC8.02□□□□□ -1.132e-7■□□□□ 10.4
SRSF1Q07955 CALU-203ENST00000479257 2572 ntTSL 1 (best) BASIC5.53□□□□□ -1.522e-7■□□□□ 10.4
SRSF1Q07955 ZNF394-207ENST00000485576 1019 ntTSL 1 (best)20.72■□□□□ 0.911e-6■□□□□ 10.4
SRSF1Q07955 ZNF394-202ENST00000394177 542 ntTSL 517.63■□□□□ 0.411e-6■□□□□ 10.4
SRSF1Q07955 ZNF394-206ENST00000481881 1619 ntTSL 1 (best)17.1■□□□□ 0.331e-6■□□□□ 10.4
SRSF1Q07955 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC14.98□□□□□ -0.011e-6■□□□□ 10.4
SRSF1Q07955 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.071e-6■□□□□ 10.4
SRSF1Q07955 ZNF394-204ENST00000462024 528 ntTSL 311.78□□□□□ -0.521e-6■□□□□ 10.4
SRSF1Q07955 ZNF394-205ENST00000464401 325 ntTSL 1 (best)11.34□□□□□ -0.591e-6■□□□□ 10.4
SRSF1Q07955 FHOD1-202ENST00000561922 2069 ntTSL 216.44■□□□□ 0.221e-6■□□□□ 10.4
SRSF1Q07955 FKBP11-211ENST00000551807 508 ntTSL 324.2■■□□□ 1.464e-6■□□□□ 10.4
SRSF1Q07955 GABPB1-AS1-204ENST00000560359 709 ntTSL 221.53■■□□□ 1.044e-6■□□□□ 10.4
SRSF1Q07955 GABPB1-AS1-206ENST00000619314 1076 nt20.57■□□□□ 0.884e-6■□□□□ 10.4
SRSF1Q07955 GUSBP11-205ENST00000452737 1662 ntTSL 1 (best)19.08■□□□□ 0.654e-6■□□□□ 10.4
SRSF1Q07955 AP000347.1-202ENST00000435868 847 ntBASIC18.03■□□□□ 0.484e-6■□□□□ 10.4
SRSF1Q07955 GUSBP11-201ENST00000422506 2055 ntTSL 218.01■□□□□ 0.474e-6■□□□□ 10.4
SRSF1Q07955 COA5-202ENST00000409997 557 ntTSL 4 BASIC16.49■□□□□ 0.234e-6■□□□□ 10.4
SRSF1Q07955 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.094e-6■□□□□ 10.4
SRSF1Q07955 COA5-205ENST00000483527 770 ntTSL 215.23■□□□□ 0.034e-6■□□□□ 10.4
SRSF1Q07955 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.034e-6■□□□□ 10.4
SRSF1Q07955 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.034e-6■□□□□ 10.4
SRSF1Q07955 RPL5-201ENST00000315741 681 ntTSL 514.93□□□□□ -0.024e-6■□□□□ 10.4
SRSF1Q07955 FKBP11-201ENST00000256680 725 ntTSL 313.93□□□□□ -0.184e-6■□□□□ 10.4
SRSF1Q07955 FKBP11-206ENST00000547789 482 ntTSL 413.93□□□□□ -0.184e-6■□□□□ 10.4
SRSF1Q07955 FKBP11-212ENST00000552878 1052 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.184e-6■□□□□ 10.4
SRSF1Q07955 AP000347.1-204ENST00000458554 438 ntTSL 313.85□□□□□ -0.194e-6■□□□□ 10.4
SRSF1Q07955 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC13.15□□□□□ -0.34e-6■□□□□ 10.4
SRSF1Q07955 AP000347.1-203ENST00000438858 543 ntTSL 312.66□□□□□ -0.384e-6■□□□□ 10.4
SRSF1Q07955 SLC2A9-209ENST00000506839 446 ntTSL 312.49□□□□□ -0.414e-6■□□□□ 10.4
SRSF1Q07955 SON-206ENST00000429093 684 ntTSL 512.04□□□□□ -0.484e-6■□□□□ 10.4
SRSF1Q07955 GUSBP11-204ENST00000451837 3234 ntTSL 1 (best)11.93□□□□□ -0.54e-6■□□□□ 10.4
SRSF1Q07955 FKBP11-213ENST00000553027 4957 nt11.55□□□□□ -0.564e-6■□□□□ 10.4
SRSF1Q07955 RPL5-202ENST00000370321 1043 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.584e-6■□□□□ 10.4
SRSF1Q07955 AC073610.2-201ENST00000537495 406 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.64e-6■□□□□ 10.4
SRSF1Q07955 GUSBP11-203ENST00000445682 3350 ntTSL 211.2□□□□□ -0.624e-6■□□□□ 10.4
SRSF1Q07955 IGF1R-210ENST00000559925 2280 ntTSL 1 (best)11.14□□□□□ -0.634e-6■□□□□ 10.4
SRSF1Q07955 AP000347.1-201ENST00000417194 5004 ntTSL 1 (best) BASIC10.85□□□□□ -0.674e-6■□□□□ 10.4
SRSF1Q07955 GUSBP11-206ENST00000455485 3816 ntTSL 2 BASIC10.62□□□□□ -0.714e-6■□□□□ 10.4
SRSF1Q07955 IGF1R-204ENST00000558355 572 ntTSL 210.59□□□□□ -0.714e-6■□□□□ 10.4
SRSF1Q07955 FKBP11-210ENST00000551694 2661 ntTSL 29.65□□□□□ -0.864e-6■□□□□ 10.4
SRSF1Q07955 IGF1R-203ENST00000557938 574 ntTSL 49.51□□□□□ -0.894e-6■□□□□ 10.4
SRSF1Q07955 AP000347.2-201ENST00000423913 584 ntTSL 59.43□□□□□ -0.94e-6■□□□□ 10.4
SRSF1Q07955 SLC2A9-213ENST00000513129 738 ntTSL 38.85□□□□□ -0.994e-6■□□□□ 10.4
SRSF1Q07955 IGF1R-201ENST00000268035 11803 ntAPPRIS P3 TSL 1 (best) BASIC8.72□□□□□ -1.014e-6■□□□□ 10.4
SRSF1Q07955 AC073610.3-201ENST00000398092 939 ntAPPRIS P1 TSL 3 BASIC8.45□□□□□ -1.064e-6■□□□□ 10.4
SRSF1Q07955 GABPB1-AS1-201ENST00000499326 717 ntTSL 28.41□□□□□ -1.064e-6■□□□□ 10.4
SRSF1Q07955 FKBP11-207ENST00000549084 517 ntTSL 38.29□□□□□ -1.084e-6■□□□□ 10.4
SRSF1Q07955 SON-207ENST00000436227 5269 ntAPPRIS P1 TSL 56.84□□□□□ -1.314e-7■□□□□ 10.4
SRSF1Q07955 IGF1R-206ENST00000558762 11726 ntAPPRIS ALT1 TSL 1 (best) BASIC6.8□□□□□ -1.324e-6■□□□□ 10.4
SRSF1Q07955 SON-214ENST00000474355 402 ntTSL 36.42□□□□□ -1.384e-6■□□□□ 10.4
SRSF1Q07955 SON-209ENST00000457208 765 ntTSL 36.19□□□□□ -1.429e-7■□□□□ 10.4
SRSF1Q07955 GABPB1-AS1-205ENST00000561289 554 ntTSL 34.78□□□□□ -1.644e-6■□□□□ 10.4
SRSF1Q07955 RPL5-204ENST00000470843 694 ntTSL 33.93□□□□□ -1.784e-6■□□□□ 10.4
SRSF1Q07955 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC3.78□□□□□ -1.84e-6■□□□□ 10.4
SRSF1Q07955 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC13.86□□□□□ -0.192e-8■□□□□ 10.4
SRSF1Q07955 MINK1-209ENST00000574453 4941 ntTSL 1 (best)13.13□□□□□ -0.312e-8■□□□□ 10.4
SRSF1Q07955 MINK1-207ENST00000572330 5299 ntTSL 513.04□□□□□ -0.322e-8■□□□□ 10.4
SRSF1Q07955 MINK1-204ENST00000571207 4569 ntTSL 512.6□□□□□ -0.392e-8■□□□□ 10.4
SRSF1Q07955 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.432e-8■□□□□ 10.4
SRSF1Q07955 MINK1-203ENST00000453408 3939 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.842e-8■□□□□ 10.4
SRSF1Q07955 SH3GLB2-208ENST00000455407 837 ntTSL 227.28■■□□□ 1.963e-9■□□□□ 10.4
SRSF1Q07955 SH3GLB2-212ENST00000483980 1015 ntTSL 226.72■■□□□ 1.873e-9■□□□□ 10.4
SRSF1Q07955 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC22.15■■□□□ 1.143e-9■□□□□ 10.4
SRSF1Q07955 SH3GLB2-204ENST00000416230 720 ntTSL 220.96■□□□□ 0.953e-9■□□□□ 10.4
SRSF1Q07955 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.713e-9■□□□□ 10.4
SRSF1Q07955 CHTF18-210ENST00000484349 568 ntTSL 317.33■□□□□ 0.363e-9■□□□□ 10.4
SRSF1Q07955 ACADVL-232ENST00000583074 410 ntTSL 516.76■□□□□ 0.273e-9■□□□□ 10.4
SRSF1Q07955 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.223e-9■□□□□ 10.4
SRSF1Q07955 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC14.76□□□□□ -0.053e-9■□□□□ 10.4
SRSF1Q07955 SH3GLB2-210ENST00000477165 623 ntTSL 214.47□□□□□ -0.093e-9■□□□□ 10.4
Retrieved 100 of 14,836 protein–RNA pairs in 239.6 ms