RNA–Protein interactions for RNA: ENST00000438858.1

AP000347.1-203, humanhuman

TSL 3

Gene AP000347.1, Length 543 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000347.1-203ENST00000438858 NISCHQ9Y2I1 1504 aa33.34■■■□□ 2.93
AP000347.1-203ENST00000438858 CCDC180Q9P1Z9 1646 aa29.59■■■□□ 2.33
AP000347.1-203ENST00000438858 ABCC9O60706 1549 aa28.96■■■□□ 2.23
AP000347.1-203ENST00000438858 DCAF8L2P0C7V8 631 aa28.1■■■□□ 2.09
AP000347.1-203ENST00000438858 RB1CC1Q8TDY2 1594 aa27.87■■■□□ 2.05
AP000347.1-203ENST00000438858 NACADO15069 1562 aa27.82■■■□□ 2.04
AP000347.1-203ENST00000438858 ZCCHC6Q5VYS8 1495 aaKnown RBP27.78■■■□□ 2.04
AP000347.1-203ENST00000438858 MYO15BQ96JP2 1530 aa27.59■■■□□ 2.01
AP000347.1-203ENST00000438858 DCAF1Q9Y4B6 1507 aa27.53■■■□□ 2
AP000347.1-203ENST00000438858 DNAJC5BQ9UF47 199 aa27.41■■□□□ 1.98
AP000347.1-203ENST00000438858 UNC13AQ9UPW8 1703 aa27.13■■□□□ 1.93
AP000347.1-203ENST00000438858 PABPN1Q86U42 306 aaKnown RBP eCLIP27.11■■□□□ 1.93
AP000347.1-203ENST00000438858 SCRIBQ14160 1630 aa27.11■■□□□ 1.93
AP000347.1-203ENST00000438858 BICRAQ9NZM4 1560 aa26.9■■□□□ 1.9
AP000347.1-203ENST00000438858 SHROOM4Q9ULL8 1493 aa26.67■■□□□ 1.86
AP000347.1-203ENST00000438858 EIF4G1Q04637 1599 aaKnown RBP26.26■■□□□ 1.79
AP000347.1-203ENST00000438858 CC2D2AQ9P2K1 1620 aa26.14■■□□□ 1.77
AP000347.1-203ENST00000438858 CECR2Q9BXF3 1484 aa25.99■■□□□ 1.75
AP000347.1-203ENST00000438858 BAZ1AQ9NRL2 1556 aaPredicted RBP25.88■■□□□ 1.73
AP000347.1-203ENST00000438858 SMARCA4P51532 1647 aa25.87■■□□□ 1.73
AP000347.1-203ENST00000438858 SMARCA2P51531 1590 aa25.71■■□□□ 1.71
AP000347.1-203ENST00000438858 MROH2BQ7Z745 1585 aa25.7■■□□□ 1.71
AP000347.1-203ENST00000438858 ATAD2BQ9ULI0 1458 aa25.69■■□□□ 1.7
AP000347.1-203ENST00000438858 NCAPD3P42695 1498 aa25.63■■□□□ 1.69
AP000347.1-203ENST00000438858 DNAJC5Q9H3Z4 198 aa25.57■■□□□ 1.68
AP000347.1-203ENST00000438858 BAZ1BQ9UIG0 1483 aaKnown RBP25.57■■□□□ 1.68
AP000347.1-203ENST00000438858 HMGXB3Q12766 1538 aa25.53■■□□□ 1.68
AP000347.1-203ENST00000438858 PEG3Q9GZU2 1588 aa25.52■■□□□ 1.68
AP000347.1-203ENST00000438858 WIZO95785 1651 aa25.46■■□□□ 1.67
AP000347.1-203ENST00000438858 RSF1Q96T23 1441 aaPredicted RBP25.45■■□□□ 1.66
AP000347.1-203ENST00000438858 TOP2AP11388 1531 aaKnown RBP25.2■■□□□ 1.62
AP000347.1-203ENST00000438858 SUPT5HO00267 1087 aaKnown RBP25.09■■□□□ 1.61
AP000347.1-203ENST00000438858 NESP48681 1621 aa25.04■■□□□ 1.6
AP000347.1-203ENST00000438858 ERCC6Q03468 1493 aa25.03■■□□□ 1.6
AP000347.1-203ENST00000438858 LAMC3Q9Y6N6 1575 aa24.99■■□□□ 1.59
AP000347.1-203ENST00000438858 CADPSQ9ULU8 1353 aa24.95■■□□□ 1.59
AP000347.1-203ENST00000438858 CUX2O14529 1486 aa24.92■■□□□ 1.58
AP000347.1-203ENST00000438858 CCDC88BA6NC98 1476 aa24.89■■□□□ 1.58
AP000347.1-203ENST00000438858 PDS5BQ9NTI5 1447 aa24.88■■□□□ 1.57
AP000347.1-203ENST00000438858 CFTRP13569 1480 aa24.78■■□□□ 1.56
AP000347.1-203ENST00000438858 KIF21AQ7Z4S6 1674 aa24.74■■□□□ 1.55
AP000347.1-203ENST00000438858 FANCD2Q9BXW9 1451 aa24.69■■□□□ 1.54
AP000347.1-203ENST00000438858 CEP164Q9UPV0 1460 aa24.68■■□□□ 1.54
AP000347.1-203ENST00000438858 PRDM2Q13029 1718 aa24.61■■□□□ 1.53
AP000347.1-203ENST00000438858 MRC2Q9UBG0 1479 aa24.59■■□□□ 1.53
AP000347.1-203ENST00000438858 THOC2Q8NI27 1593 aaKnown RBP24.59■■□□□ 1.53
AP000347.1-203ENST00000438858 WDR62O43379 1518 aa24.45■■□□□ 1.5
AP000347.1-203ENST00000438858 URB2Q14146 1524 aaKnown RBP24.38■■□□□ 1.49
AP000347.1-203ENST00000438858 ABCC8Q09428 1581 aa24.31■■□□□ 1.48
AP000347.1-203ENST00000438858 TOPBP1Q92547 1522 aa24.27■■□□□ 1.48
AP000347.1-203ENST00000438858 TRIM41Q8WV44 630 aa24.27■■□□□ 1.48
AP000347.1-203ENST00000438858 DNMBPQ6XZF7 1577 aa24.27■■□□□ 1.48
AP000347.1-203ENST00000438858 IFT140Q96RY7 1462 aa24.13■■□□□ 1.45
AP000347.1-203ENST00000438858 CUX1P39880 1505 aa24.11■■□□□ 1.45
AP000347.1-203ENST00000438858 WRNQ14191 1432 aaPredicted RBP eCLIP24.07■■□□□ 1.44
AP000347.1-203ENST00000438858 POLA1P09884 1462 aaPredicted RBP24.07■■□□□ 1.44
AP000347.1-203ENST00000438858 FGD5Q6ZNL6 1462 aa24.07■■□□□ 1.44
AP000347.1-203ENST00000438858 SOGA1O94964 1423 aa24.03■■□□□ 1.44
AP000347.1-203ENST00000438858 RAD54L2Q9Y4B4 1467 aa24■■□□□ 1.43
AP000347.1-203ENST00000438858 ZNF608Q9ULD9 1512 aaPredicted RBP23.97■■□□□ 1.43
AP000347.1-203ENST00000438858 TOP2BQ02880 1626 aa23.95■■□□□ 1.42
AP000347.1-203ENST00000438858 TARBP1Q13395 1621 aaKnown RBP23.95■■□□□ 1.42
AP000347.1-203ENST00000438858 SYNJ1O43426 1573 aa23.95■■□□□ 1.42
AP000347.1-203ENST00000438858 BIVM-ERCC5R4GMW8 1640 aa23.92■■□□□ 1.42
AP000347.1-203ENST00000438858 EIF4G3O43432 1585 aaKnown RBP23.9■■□□□ 1.42
AP000347.1-203ENST00000438858 AQRO60306 1485 aaKnown RBP eCLIP23.89■■□□□ 1.427e-7■■□□□ 14.1
AP000347.1-203ENST00000438858 TDRD9Q8NDG6 1382 aaKnown RBP23.89■■□□□ 1.41
AP000347.1-203ENST00000438858 WDR97A6NE52 1622 aa23.79■■□□□ 1.4
AP000347.1-203ENST00000438858 ABCA10Q8WWZ4 1543 aa23.79■■□□□ 1.4
AP000347.1-203ENST00000438858 FBLN2P98095 1184 aa23.75■■□□□ 1.39
AP000347.1-203ENST00000438858 GAPVD1Q14C86 1478 aa23.75■■□□□ 1.39
AP000347.1-203ENST00000438858 GRIN2BQ13224 1484 aa23.73■■□□□ 1.39
AP000347.1-203ENST00000438858 SNAPC4Q5SXM2 1469 aa23.69■■□□□ 1.38
AP000347.1-203ENST00000438858 OSCARQ8IYS5 282 aa23.69■■□□□ 1.38
AP000347.1-203ENST00000438858 PBRM1Q86U86 1689 aa23.67■■□□□ 1.38
AP000347.1-203ENST00000438858 ABCA5Q8WWZ7 1642 aa23.66■■□□□ 1.38
AP000347.1-203ENST00000438858 CHMP7Q8WUX9 453 aaPredicted RBP23.65■■□□□ 1.38
AP000347.1-203ENST00000438858 MAGI1Q96QZ7 1491 aaPredicted RBP23.62■■□□□ 1.37
AP000347.1-203ENST00000438858 CHD1O14646 1710 aa23.59■■□□□ 1.37
AP000347.1-203ENST00000438858 KIF27Q86VH2 1401 aa23.58■■□□□ 1.36
AP000347.1-203ENST00000438858 SYNJ2O15056 1496 aa23.55■■□□□ 1.36
AP000347.1-203ENST00000438858 RIMBP3CA6NJZ7 1639 aa23.52■■□□□ 1.36
AP000347.1-203ENST00000438858 RIMBP3BA6NNM3 1639 aa23.52■■□□□ 1.36
AP000347.1-203ENST00000438858 RIMBP3Q9UFD9 1639 aa23.52■■□□□ 1.36
AP000347.1-203ENST00000438858 ERICH3Q5RHP9 1530 aa23.52■■□□□ 1.36
AP000347.1-203ENST00000438858 ADAMTS12P58397 1594 aa23.48■■□□□ 1.35
AP000347.1-203ENST00000438858 FHAD1B1AJZ9 1412 aa23.47■■□□□ 1.35
AP000347.1-203ENST00000438858 GRIN2AQ12879 1464 aa23.4■■□□□ 1.34
AP000347.1-203ENST00000438858 IGF1RP08069 1367 aa23.39■■□□□ 1.33
AP000347.1-203ENST00000438858 CUL7Q14999 1698 aa23.36■■□□□ 1.33
AP000347.1-203ENST00000438858 CHIC1Q5VXU3 224 aa23.36■■□□□ 1.33
AP000347.1-203ENST00000438858 ARHGEF11O15085 1522 aa23.35■■□□□ 1.33
AP000347.1-203ENST00000438858 RUSC2Q8N2Y8 1516 aa23.33■■□□□ 1.32
AP000347.1-203ENST00000438858 CARMIL1Q5VZK9 1371 aa23.32■■□□□ 1.32
AP000347.1-203ENST00000438858 CLASP1Q7Z460 1538 aa23.28■■□□□ 1.32
AP000347.1-203ENST00000438858 CEP170Q5SW79 1584 aa23.25■■□□□ 1.31
AP000347.1-203ENST00000438858 NUP160Q12769 1436 aa23.25■■□□□ 1.31
AP000347.1-203ENST00000438858 FAM9AQ8IZU1 332 aaPredicted RBP23.24■■□□□ 1.31
AP000347.1-203ENST00000438858 RAPGEF2Q9Y4G8 1499 aa23.18■■□□□ 1.3
AP000347.1-203ENST00000438858 EEA1Q15075 1411 aa23.18■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms