RNA–Protein interactions for RNA: ENST00000528462.5

PACSIN3-205, Transcript of protein kinase C and casein kinase substrate in neurons 3, humanhuman

TSL 2

Gene PACSIN3, Length 1,560 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3-205ENST00000528462 NISCHQ9Y2I1 1504 aa51.99■■■■■ 5.91
PACSIN3-205ENST00000528462 CCDC180Q9P1Z9 1646 aa45.82■■■■■ 4.93
PACSIN3-205ENST00000528462 ABCC9O60706 1549 aa43.97■■■■■ 4.63
PACSIN3-205ENST00000528462 ZCCHC6Q5VYS8 1495 aaKnown RBP43.49■■■■■ 4.55
PACSIN3-205ENST00000528462 DCAF1Q9Y4B6 1507 aa43.12■■■■■ 4.49
PACSIN3-205ENST00000528462 MYO15BQ96JP2 1530 aa43.02■■■■■ 4.48
PACSIN3-205ENST00000528462 DCAF8L2P0C7V8 631 aa42.97■■■■■ 4.47
PACSIN3-205ENST00000528462 NACADO15069 1562 aa42.92■■■■■ 4.46
PACSIN3-205ENST00000528462 RB1CC1Q8TDY2 1594 aa42.72■■■■■ 4.43
PACSIN3-205ENST00000528462 SCRIBQ14160 1630 aa41.8■■■■■ 4.28
PACSIN3-205ENST00000528462 UNC13AQ9UPW8 1703 aa41.69■■■■■ 4.26
PACSIN3-205ENST00000528462 SHROOM4Q9ULL8 1493 aa41.44■■■■■ 4.22
PACSIN3-205ENST00000528462 BICRAQ9NZM4 1560 aa41.4■■■■■ 4.22
PACSIN3-205ENST00000528462 PABPN1Q86U42 306 aaKnown RBP eCLIP41.24■■■■■ 4.199e-7■□□□□ 8.3
PACSIN3-205ENST00000528462 CECR2Q9BXF3 1484 aa40.36■■■■■ 4.05
PACSIN3-205ENST00000528462 EIF4G1Q04637 1599 aaKnown RBP40.24■■■■■ 4.03
PACSIN3-205ENST00000528462 BAZ1AQ9NRL2 1556 aaPredicted RBP40.23■■■■■ 4.03
PACSIN3-205ENST00000528462 SMARCA4P51532 1647 aa40.12■■■■■ 4.01
PACSIN3-205ENST00000528462 MROH2BQ7Z745 1585 aa40.05■■■■■ 4
PACSIN3-205ENST00000528462 RSF1Q96T23 1441 aaPredicted RBP39.93■■■■□ 3.98
PACSIN3-205ENST00000528462 CC2D2AQ9P2K1 1620 aa39.84■■■■□ 3.97
PACSIN3-205ENST00000528462 PEG3Q9GZU2 1588 aa39.8■■■■□ 3.96
PACSIN3-205ENST00000528462 ATAD2BQ9ULI0 1458 aa39.73■■■■□ 3.95
PACSIN3-205ENST00000528462 SMARCA2P51531 1590 aa39.73■■■■□ 3.95
PACSIN3-205ENST00000528462 DNAJC5BQ9UF47 199 aa39.63■■■■□ 3.94
PACSIN3-205ENST00000528462 NCAPD3P42695 1498 aa39.62■■■■□ 3.93
PACSIN3-205ENST00000528462 WIZO95785 1651 aa39.6■■■■□ 3.93
PACSIN3-205ENST00000528462 HMGXB3Q12766 1538 aa39.48■■■■□ 3.91
PACSIN3-205ENST00000528462 SUPT5HO00267 1087 aaKnown RBP39.45■■■■□ 3.91
PACSIN3-205ENST00000528462 BAZ1BQ9UIG0 1483 aaKnown RBP39.42■■■■□ 3.9
PACSIN3-205ENST00000528462 TOP2AP11388 1531 aaKnown RBP39.3■■■■□ 3.88
PACSIN3-205ENST00000528462 CCDC88BA6NC98 1476 aa38.83■■■■□ 3.81
PACSIN3-205ENST00000528462 CADPSQ9ULU8 1353 aa38.49■■■■□ 3.75
PACSIN3-205ENST00000528462 CFTRP13569 1480 aa38.45■■■■□ 3.75
PACSIN3-205ENST00000528462 LAMC3Q9Y6N6 1575 aa38.4■■■■□ 3.74
PACSIN3-205ENST00000528462 NESP48681 1621 aa38.31■■■■□ 3.72
PACSIN3-205ENST00000528462 PDS5BQ9NTI5 1447 aa38.13■■■■□ 3.69
PACSIN3-205ENST00000528462 PRDM2Q13029 1718 aa38.13■■■■□ 3.69
PACSIN3-205ENST00000528462 FANCD2Q9BXW9 1451 aa38.01■■■■□ 3.68
PACSIN3-205ENST00000528462 CEP164Q9UPV0 1460 aa37.88■■■■□ 3.65
PACSIN3-205ENST00000528462 ERCC6Q03468 1493 aa37.85■■■■□ 3.65
PACSIN3-205ENST00000528462 KIF21AQ7Z4S6 1674 aa37.85■■■■□ 3.65
PACSIN3-205ENST00000528462 MRC2Q9UBG0 1479 aa37.65■■■■□ 3.62
PACSIN3-205ENST00000528462 WRNQ14191 1432 aaPredicted RBP eCLIP37.61■■■■□ 3.61
PACSIN3-205ENST00000528462 ABCC8Q09428 1581 aa37.61■■■■□ 3.61
PACSIN3-205ENST00000528462 URB2Q14146 1524 aaKnown RBP37.57■■■■□ 3.6
PACSIN3-205ENST00000528462 THOC2Q8NI27 1593 aaKnown RBP37.56■■■■□ 3.6
PACSIN3-205ENST00000528462 DNMBPQ6XZF7 1577 aa37.52■■■■□ 3.6
PACSIN3-205ENST00000528462 WDR62O43379 1518 aa37.52■■■■□ 3.6
PACSIN3-205ENST00000528462 CUX1P39880 1505 aa37.52■■■■□ 3.6
PACSIN3-205ENST00000528462 TOPBP1Q92547 1522 aa37.5■■■■□ 3.59
PACSIN3-205ENST00000528462 TOP2BQ02880 1626 aa37.44■■■■□ 3.58
PACSIN3-205ENST00000528462 SYNJ1O43426 1573 aa37.43■■■■□ 3.58
PACSIN3-205ENST00000528462 BIVM-ERCC5R4GMW8 1640 aa37.4■■■■□ 3.58
PACSIN3-205ENST00000528462 CHIC1Q5VXU3 224 aa37.38■■■■□ 3.58
PACSIN3-205ENST00000528462 TRIM41Q8WV44 630 aa37.27■■■■□ 3.56
PACSIN3-205ENST00000528462 POLA1P09884 1462 aaPredicted RBP37.25■■■■□ 3.55
PACSIN3-205ENST00000528462 FGD5Q6ZNL6 1462 aa37.25■■■■□ 3.55
PACSIN3-205ENST00000528462 CUX2O14529 1486 aa37.21■■■■□ 3.55
PACSIN3-205ENST00000528462 SOGA1O94964 1423 aa37.1■■■■□ 3.53
PACSIN3-205ENST00000528462 IFT140Q96RY7 1462 aa37.07■■■■□ 3.53
PACSIN3-205ENST00000528462 RAD54L2Q9Y4B4 1467 aa37.03■■■■□ 3.52
PACSIN3-205ENST00000528462 TARBP1Q13395 1621 aaKnown RBP37.03■■■■□ 3.52
PACSIN3-205ENST00000528462 ABCA10Q8WWZ4 1543 aa36.99■■■■□ 3.51
PACSIN3-205ENST00000528462 WDR97A6NE52 1622 aa36.89■■■■□ 3.5
PACSIN3-205ENST00000528462 ZNF608Q9ULD9 1512 aaPredicted RBP36.79■■■■□ 3.48
PACSIN3-205ENST00000528462 KIF27Q86VH2 1401 aa36.77■■■■□ 3.48
PACSIN3-205ENST00000528462 TDRD9Q8NDG6 1382 aaKnown RBP36.77■■■■□ 3.48
PACSIN3-205ENST00000528462 ABCA5Q8WWZ7 1642 aa36.73■■■■□ 3.47
PACSIN3-205ENST00000528462 AQRO60306 1485 aaKnown RBP eCLIP36.7■■■■□ 3.469e-7■■■■□ 19.7
PACSIN3-205ENST00000528462 GAPVD1Q14C86 1478 aa36.69■■■■□ 3.46
PACSIN3-205ENST00000528462 EIF4G3O43432 1585 aaKnown RBP36.67■■■■□ 3.46
PACSIN3-205ENST00000528462 EEA1Q15075 1411 aa36.66■■■■□ 3.46
PACSIN3-205ENST00000528462 RUSC2Q8N2Y8 1516 aa36.63■■■■□ 3.45
PACSIN3-205ENST00000528462 GRIN2BQ13224 1484 aa36.58■■■■□ 3.45
PACSIN3-205ENST00000528462 ERICH3Q5RHP9 1530 aa36.55■■■■□ 3.44
PACSIN3-205ENST00000528462 IGF1RP08069 1367 aa36.53■■■■□ 3.44
PACSIN3-205ENST00000528462 PBRM1Q86U86 1689 aa36.48■■■■□ 3.43
PACSIN3-205ENST00000528462 CSRNP3Q8WYN3 585 aa36.44■■■■□ 3.42
PACSIN3-205ENST00000528462 MAGI1Q96QZ7 1491 aaPredicted RBP36.42■■■■□ 3.42
PACSIN3-205ENST00000528462 FAM9AQ8IZU1 332 aaPredicted RBP36.4■■■■□ 3.42
PACSIN3-205ENST00000528462 SNAPC4Q5SXM2 1469 aa36.37■■■■□ 3.41
PACSIN3-205ENST00000528462 CUL7Q14999 1698 aa36.34■■■■□ 3.41
PACSIN3-205ENST00000528462 FHAD1B1AJZ9 1412 aa36.32■■■■□ 3.4
PACSIN3-205ENST00000528462 CARMIL1Q5VZK9 1371 aa36.32■■■■□ 3.4
PACSIN3-205ENST00000528462 PRXQ9BXM0 1461 aa36.3■■■■□ 3.4
PACSIN3-205ENST00000528462 ADAMTS12P58397 1594 aa36.29■■■■□ 3.4
PACSIN3-205ENST00000528462 SYNJ2O15056 1496 aa36.25■■■■□ 3.39
PACSIN3-205ENST00000528462 RAPGEF2Q9Y4G8 1499 aa36.18■■■■□ 3.38
PACSIN3-205ENST00000528462 KIF21BO75037 1637 aa36.16■■■■□ 3.38
PACSIN3-205ENST00000528462 CHMP7Q8WUX9 453 aaPredicted RBP36.14■■■■□ 3.38
PACSIN3-205ENST00000528462 GRIN2AQ12879 1464 aa36.11■■■■□ 3.37
PACSIN3-205ENST00000528462 FBLN2P98095 1184 aa36.05■■■■□ 3.36
PACSIN3-205ENST00000528462 GOLGA3Q08378 1498 aa36.01■■■■□ 3.36
PACSIN3-205ENST00000528462 CHD1O14646 1710 aa36■■■■□ 3.35
PACSIN3-205ENST00000528462 NUP160Q12769 1436 aa35.94■■■■□ 3.34
PACSIN3-205ENST00000528462 CEP170Q5SW79 1584 aa35.86■■■■□ 3.33
PACSIN3-205ENST00000528462 OSCARQ8IYS5 282 aa35.82■■■■□ 3.32
PACSIN3-205ENST00000528462 UBTFP17480 764 aaKnown RBP35.81■■■■□ 3.32
PACSIN3-205ENST00000528462 KIAA0586Q9BVV6 1533 aa35.8■■■■□ 3.32
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms