RNA–Protein interactions for RNA: ENST00000458554.5

AP000347.1-204, humanhuman

TSL 3

Gene AP000347.1, Length 438 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000347.1-204ENST00000458554 AEBP2Q6ZN18 517 aaPredicted RBP37.21■■■■□ 3.55
AP000347.1-204ENST00000458554 CHIC1Q5VXU3 224 aa35.55■■■■□ 3.28
AP000347.1-204ENST00000458554 NISCHQ9Y2I1 1504 aa35.15■■■■□ 3.22
AP000347.1-204ENST00000458554 SENP3Q9H4L4 574 aaPredicted RBP31.63■■■□□ 2.65
AP000347.1-204ENST00000458554 ABCC9O60706 1549 aa31.63■■■□□ 2.65
AP000347.1-204ENST00000458554 CCDC180Q9P1Z9 1646 aa31.42■■■□□ 2.62
AP000347.1-204ENST00000458554 PHF23Q9BUL5 403 aaPredicted RBP31.29■■■□□ 2.6
AP000347.1-204ENST00000458554 RB1CC1Q8TDY2 1594 aa30.02■■■□□ 2.4
AP000347.1-204ENST00000458554 DCAF8L2P0C7V8 631 aa29.86■■■□□ 2.37
AP000347.1-204ENST00000458554 NACADO15069 1562 aa29.81■■■□□ 2.36
AP000347.1-204ENST00000458554 DNAJC5BQ9UF47 199 aa29.78■■■□□ 2.36
AP000347.1-204ENST00000458554 PABPN1Q86U42 306 aaKnown RBP eCLIP29.53■■■□□ 2.32
AP000347.1-204ENST00000458554 FOXD1Q16676 465 aa29.5■■■□□ 2.31
AP000347.1-204ENST00000458554 MYO15BQ96JP2 1530 aa29.4■■■□□ 2.3
AP000347.1-204ENST00000458554 UNC13AQ9UPW8 1703 aa29.16■■■□□ 2.26
AP000347.1-204ENST00000458554 BICRAQ9NZM4 1560 aa29.13■■■□□ 2.25
AP000347.1-204ENST00000458554 ZCCHC6Q5VYS8 1495 aaKnown RBP29.1■■■□□ 2.25
AP000347.1-204ENST00000458554 DCAF1Q9Y4B6 1507 aa29■■■□□ 2.23
AP000347.1-204ENST00000458554 SHROOM4Q9ULL8 1493 aa28.75■■■□□ 2.19
AP000347.1-204ENST00000458554 SCRIBQ14160 1630 aa28.7■■■□□ 2.19
AP000347.1-204ENST00000458554 CECR2Q9BXF3 1484 aa28.5■■■□□ 2.15
AP000347.1-204ENST00000458554 CC2D2AQ9P2K1 1620 aa28.5■■■□□ 2.15
AP000347.1-204ENST00000458554 PLPPR3Q6T4P5 718 aa28.48■■■□□ 2.15
AP000347.1-204ENST00000458554 EIF4G1Q04637 1599 aaKnown RBP28.43■■■□□ 2.14
AP000347.1-204ENST00000458554 PPP6R1Q9UPN7 881 aa27.8■■■□□ 2.04
AP000347.1-204ENST00000458554 ADRA2BP18089 450 aa27.7■■■□□ 2.02
AP000347.1-204ENST00000458554 NCAPD3P42695 1498 aa27.59■■■□□ 2.01
AP000347.1-204ENST00000458554 PIAS4Q8N2W9 510 aaPredicted RBP27.58■■■□□ 2.01
AP000347.1-204ENST00000458554 ATAD2BQ9ULI0 1458 aa27.49■■□□□ 1.99
AP000347.1-204ENST00000458554 MSH5O43196 834 aa27.45■■□□□ 1.98
AP000347.1-204ENST00000458554 DNAJC5Q9H3Z4 198 aa27.38■■□□□ 1.97
AP000347.1-204ENST00000458554 SMARCA4P51532 1647 aa27.37■■□□□ 1.97
AP000347.1-204ENST00000458554 SMARCA2P51531 1590 aa27.36■■□□□ 1.97
AP000347.1-204ENST00000458554 ERCC6Q03468 1493 aa27.32■■□□□ 1.96
AP000347.1-204ENST00000458554 HMGXB3Q12766 1538 aa27.3■■□□□ 1.96
AP000347.1-204ENST00000458554 BAZ1AQ9NRL2 1556 aaPredicted RBP27.26■■□□□ 1.96
AP000347.1-204ENST00000458554 CUX2O14529 1486 aa27.25■■□□□ 1.95
AP000347.1-204ENST00000458554 BAZ1BQ9UIG0 1483 aaKnown RBP27.21■■□□□ 1.95
AP000347.1-204ENST00000458554 NESP48681 1621 aa27.14■■□□□ 1.94
AP000347.1-204ENST00000458554 PEG3Q9GZU2 1588 aa27.11■■□□□ 1.93
AP000347.1-204ENST00000458554 MROH2BQ7Z745 1585 aa27.09■■□□□ 1.93
AP000347.1-204ENST00000458554 LAMC3Q9Y6N6 1575 aa26.89■■□□□ 1.9
AP000347.1-204ENST00000458554 PDS5BQ9NTI5 1447 aa26.84■■□□□ 1.89
AP000347.1-204ENST00000458554 CADPSQ9ULU8 1353 aa26.78■■□□□ 1.88
AP000347.1-204ENST00000458554 THOC2Q8NI27 1593 aaKnown RBP26.77■■□□□ 1.88
AP000347.1-204ENST00000458554 WIZO95785 1651 aa26.7■■□□□ 1.86
AP000347.1-204ENST00000458554 KIF21AQ7Z4S6 1674 aa26.65■■□□□ 1.86
AP000347.1-204ENST00000458554 RSF1Q96T23 1441 aaPredicted RBP26.56■■□□□ 1.84
AP000347.1-204ENST00000458554 MRC2Q9UBG0 1479 aa26.55■■□□□ 1.84
AP000347.1-204ENST00000458554 WDR62O43379 1518 aa26.45■■□□□ 1.83
AP000347.1-204ENST00000458554 CEP164Q9UPV0 1460 aa26.45■■□□□ 1.82
AP000347.1-204ENST00000458554 CFTRP13569 1480 aa26.43■■□□□ 1.82
AP000347.1-204ENST00000458554 FANCD2Q9BXW9 1451 aa26.43■■□□□ 1.82
AP000347.1-204ENST00000458554 POTEDQ86YR6 584 aa26.41■■□□□ 1.82
AP000347.1-204ENST00000458554 TOP2AP11388 1531 aaKnown RBP26.39■■□□□ 1.81
AP000347.1-204ENST00000458554 URB2Q14146 1524 aaKnown RBP26.19■■□□□ 1.78
AP000347.1-204ENST00000458554 TRIM41Q8WV44 630 aa26.18■■□□□ 1.78
AP000347.1-204ENST00000458554 CCDC88BA6NC98 1476 aa26.16■■□□□ 1.78
AP000347.1-204ENST00000458554 OSCARQ8IYS5 282 aa26.12■■□□□ 1.77
AP000347.1-204ENST00000458554 IFT140Q96RY7 1462 aa25.93■■□□□ 1.74
AP000347.1-204ENST00000458554 PRDM2Q13029 1718 aa25.91■■□□□ 1.74
AP000347.1-204ENST00000458554 TOPBP1Q92547 1522 aa25.9■■□□□ 1.74
AP000347.1-204ENST00000458554 ZNF608Q9ULD9 1512 aaPredicted RBP25.9■■□□□ 1.74
AP000347.1-204ENST00000458554 ABCC8Q09428 1581 aa25.87■■□□□ 1.73
AP000347.1-204ENST00000458554 DNMBPQ6XZF7 1577 aa25.77■■□□□ 1.72
AP000347.1-204ENST00000458554 AQRO60306 1485 aaKnown RBP eCLIP25.7■■□□□ 1.7
AP000347.1-204ENST00000458554 EIF4G3O43432 1585 aaKnown RBP25.66■■□□□ 1.7
AP000347.1-204ENST00000458554 POLA1P09884 1462 aaPredicted RBP25.65■■□□□ 1.7
AP000347.1-204ENST00000458554 TARBP1Q13395 1621 aaKnown RBP25.63■■□□□ 1.69
AP000347.1-204ENST00000458554 FBLN2P98095 1184 aa25.62■■□□□ 1.69
AP000347.1-204ENST00000458554 RIMBP3CA6NJZ7 1639 aa25.6■■□□□ 1.69
AP000347.1-204ENST00000458554 RIMBP3BA6NNM3 1639 aa25.6■■□□□ 1.69
AP000347.1-204ENST00000458554 RIMBP3Q9UFD9 1639 aa25.6■■□□□ 1.69
AP000347.1-204ENST00000458554 SOGA1O94964 1423 aa25.6■■□□□ 1.69
AP000347.1-204ENST00000458554 RAD54L2Q9Y4B4 1467 aa25.58■■□□□ 1.69
AP000347.1-204ENST00000458554 ARHGEF11O15085 1522 aa25.57■■□□□ 1.68
AP000347.1-204ENST00000458554 TDRD9Q8NDG6 1382 aaKnown RBP25.56■■□□□ 1.68
AP000347.1-204ENST00000458554 CYB5RLQ6IPT4 315 aa25.52■■□□□ 1.68
AP000347.1-204ENST00000458554 FGD5Q6ZNL6 1462 aa25.48■■□□□ 1.67
AP000347.1-204ENST00000458554 SUPT5HO00267 1087 aaKnown RBP25.45■■□□□ 1.66
AP000347.1-204ENST00000458554 CUX1P39880 1505 aa25.43■■□□□ 1.66
AP000347.1-204ENST00000458554 CHD1O14646 1710 aa25.41■■□□□ 1.66
AP000347.1-204ENST00000458554 CHMP7Q8WUX9 453 aaPredicted RBP25.41■■□□□ 1.66
AP000347.1-204ENST00000458554 MAPK8IP2Q13387 824 aaPredicted RBP25.39■■□□□ 1.66
AP000347.1-204ENST00000458554 SNAPC4Q5SXM2 1469 aa25.39■■□□□ 1.65
AP000347.1-204ENST00000458554 WDR97A6NE52 1622 aa25.34■■□□□ 1.65
AP000347.1-204ENST00000458554 GRIN2BQ13224 1484 aa25.34■■□□□ 1.65
AP000347.1-204ENST00000458554 ARAP1Q96P48 1450 aa25.32■■□□□ 1.64
AP000347.1-204ENST00000458554 MAGI1Q96QZ7 1491 aaPredicted RBP25.32■■□□□ 1.64
AP000347.1-204ENST00000458554 SCAF1Q9H7N4 1312 aaKnown RBP25.28■■□□□ 1.64
AP000347.1-204ENST00000458554 TRHP20396 242 aaPredicted RBP25.25■■□□□ 1.63
AP000347.1-204ENST00000458554 SYNJ2O15056 1496 aa25.25■■□□□ 1.63
AP000347.1-204ENST00000458554 GAPVD1Q14C86 1478 aa25.24■■□□□ 1.63
AP000347.1-204ENST00000458554 SYNJ1O43426 1573 aa25.21■■□□□ 1.63
AP000347.1-204ENST00000458554 CLASP1Q7Z460 1538 aa25.21■■□□□ 1.63
AP000347.1-204ENST00000458554 ABCA10Q8WWZ4 1543 aa25.19■■□□□ 1.62
AP000347.1-204ENST00000458554 DMRT2Q9Y5R5 561 aa25.15■■□□□ 1.62
AP000347.1-204ENST00000458554 WRNQ14191 1432 aaPredicted RBP eCLIP25.14■■□□□ 1.62
AP000347.1-204ENST00000458554 ABCA5Q8WWZ7 1642 aa25.08■■□□□ 1.6
AP000347.1-204ENST00000458554 PBRM1Q86U86 1689 aa25.06■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms