RNA–Protein interactions for RNA: ENST00000417194.5

AP000347.1-201, humanhuman

TSL 1 (best) BASIC

Gene AP000347.1, Length 5,004 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000347.1-201ENST00000417194 DCAF8L2P0C7V8 631 aa24.87■■□□□ 1.57
AP000347.1-201ENST00000417194 NISCHQ9Y2I1 1504 aa24.68■■□□□ 1.54
AP000347.1-201ENST00000417194 SUPT5HO00267 1087 aaKnown RBP23.23■■□□□ 1.31
AP000347.1-201ENST00000417194 SHROOM4Q9ULL8 1493 aa23.13■■□□□ 1.29
AP000347.1-201ENST00000417194 EHMT2Q96KQ7 1210 aa22.23■■□□□ 1.15
AP000347.1-201ENST00000417194 FAM9AQ8IZU1 332 aaPredicted RBP21.85■■□□□ 1.09
AP000347.1-201ENST00000417194 APLP2Q06481 763 aa21.72■■□□□ 1.07
AP000347.1-201ENST00000417194 TRIM41Q8WV44 630 aa21.58■■□□□ 1.05
AP000347.1-201ENST00000417194 ABCC9O60706 1549 aa21.49■■□□□ 1.03
AP000347.1-201ENST00000417194 RANGAP1P46060 587 aaPredicted RBP21.46■■□□□ 1.03
AP000347.1-201ENST00000417194 TTBK1Q5TCY1 1321 aaPredicted RBP21.36■■□□□ 1.01
AP000347.1-201ENST00000417194 UBTFP17480 764 aaKnown RBP21.26■□□□□ 0.99
AP000347.1-201ENST00000417194 ATP1B4Q9UN42 357 aaPredicted RBP21.24■□□□□ 0.99
AP000347.1-201ENST00000417194 PABPN1Q86U42 306 aaKnown RBP eCLIP21.21■□□□□ 0.99
AP000347.1-201ENST00000417194 PCGF6Q9BYE7 350 aa21.01■□□□□ 0.95
AP000347.1-201ENST00000417194 CHIC1Q5VXU3 224 aa20.73■□□□□ 0.91
AP000347.1-201ENST00000417194 PPARGC1BQ86YN6 1023 aaKnown RBP20.69■□□□□ 0.9
AP000347.1-201ENST00000417194 CCER1Q8TC90 406 aaPredicted RBP20.69■□□□□ 0.9
AP000347.1-201ENST00000417194 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.67■□□□□ 0.9
AP000347.1-201ENST00000417194 HNRNPUL2Q1KMD3 747 aaKnown RBP20.67■□□□□ 0.9
AP000347.1-201ENST00000417194 LOC105371045A0A1W2PR82 267 aa20.59■□□□□ 0.89
AP000347.1-201ENST00000417194 ZEB1P37275 1124 aaPredicted RBP20.48■□□□□ 0.87
AP000347.1-201ENST00000417194 MYT1LQ9UL68 1186 aa20.48■□□□□ 0.87
AP000347.1-201ENST00000417194 ITGAEP38570 1179 aa20.43■□□□□ 0.86
AP000347.1-201ENST00000417194 SCRIBQ14160 1630 aa20.39■□□□□ 0.85
AP000347.1-201ENST00000417194 ZCCHC6Q5VYS8 1495 aaKnown RBP20.39■□□□□ 0.85
AP000347.1-201ENST00000417194 CCDC180Q9P1Z9 1646 aa20.37■□□□□ 0.85
AP000347.1-201ENST00000417194 TRIM26Q12899 539 aaPredicted RBP20.31■□□□□ 0.84
AP000347.1-201ENST00000417194 PELP1Q8IZL8 1130 aaKnown RBP20.3■□□□□ 0.84
AP000347.1-201ENST00000417194 FBLN2P98095 1184 aa20.28■□□□□ 0.84
AP000347.1-201ENST00000417194 RB1CC1Q8TDY2 1594 aa20.07■□□□□ 0.8
AP000347.1-201ENST00000417194 FAM50AQ14320 339 aaKnown RBP20.02■□□□□ 0.8
AP000347.1-201ENST00000417194 CSRNP3Q8WYN3 585 aa20■□□□□ 0.79
AP000347.1-201ENST00000417194 CENPBP07199 599 aaPredicted RBP20■□□□□ 0.79
AP000347.1-201ENST00000417194 P3H3Q8IVL6 736 aa19.94■□□□□ 0.78
AP000347.1-201ENST00000417194 POLR3GLQ9BT43 218 aa19.94■□□□□ 0.78
AP000347.1-201ENST00000417194 NACADO15069 1562 aa19.88■□□□□ 0.77
AP000347.1-201ENST00000417194 ARID3CA6NKF2 412 aa19.85■□□□□ 0.77
AP000347.1-201ENST00000417194 TRIM52Q96A61 297 aa19.83■□□□□ 0.77
AP000347.1-201ENST00000417194 YTHDC1Q96MU7 727 aaKnown RBP19.82■□□□□ 0.76
AP000347.1-201ENST00000417194 HRCP23327 699 aa19.72■□□□□ 0.75
AP000347.1-201ENST00000417194 CNGB1Q14028 1251 aaPredicted RBP19.71■□□□□ 0.75
AP000347.1-201ENST00000417194 NEFLP07196 543 aa19.69■□□□□ 0.74
AP000347.1-201ENST00000417194 CDK11AQ9UQ88 783 aaPredicted RBP19.66■□□□□ 0.74
AP000347.1-201ENST00000417194 RSF1Q96T23 1441 aaPredicted RBP19.65■□□□□ 0.74
AP000347.1-201ENST00000417194 SLC4A1APQ9BWU0 796 aaKnown RBP19.64■□□□□ 0.74
AP000347.1-201ENST00000417194 NEUROD1Q13562 356 aa19.62■□□□□ 0.73
AP000347.1-201ENST00000417194 ZNF777Q9ULD5 760 aaPredicted RBP19.62■□□□□ 0.73
AP000347.1-201ENST00000417194 NPM1P06748 294 aaKnown RBP eCLIP19.57■□□□□ 0.72
AP000347.1-201ENST00000417194 CHMP7Q8WUX9 453 aaPredicted RBP19.57■□□□□ 0.72
AP000347.1-201ENST00000417194 BAZ1BQ9UIG0 1483 aaKnown RBP19.56■□□□□ 0.72
AP000347.1-201ENST00000417194 DCAF1Q9Y4B6 1507 aa19.52■□□□□ 0.72
AP000347.1-201ENST00000417194 ZNF326Q5BKZ1 582 aaKnown RBP19.52■□□□□ 0.71
AP000347.1-201ENST00000417194 CECR2Q9BXF3 1484 aa19.41■□□□□ 0.7
AP000347.1-201ENST00000417194 BAZ1AQ9NRL2 1556 aaPredicted RBP19.39■□□□□ 0.7
AP000347.1-201ENST00000417194 ERICH6Q7L0X2 663 aa19.37■□□□□ 0.69
AP000347.1-201ENST00000417194 ESF1Q9H501 851 aaKnown RBP19.35■□□□□ 0.69
AP000347.1-201ENST00000417194 BCANQ96GW7 911 aa19.35■□□□□ 0.69
AP000347.1-201ENST00000417194 WRNQ14191 1432 aaPredicted RBP eCLIP19.34■□□□□ 0.69
AP000347.1-201ENST00000417194 ERCC6Q03468 1493 aa19.31■□□□□ 0.68
AP000347.1-201ENST00000417194 DIEXFQ68CQ4 756 aaKnown RBP19.3■□□□□ 0.68
AP000347.1-201ENST00000417194 MTUS2Q5JR59 1369 aa19.23■□□□□ 0.67
AP000347.1-201ENST00000417194 CHIC2Q9UKJ5 165 aa19.23■□□□□ 0.67
AP000347.1-201ENST00000417194 CLIP1P30622 1438 aa19.22■□□□□ 0.67
AP000347.1-201ENST00000417194 EEA1Q15075 1411 aa19.21■□□□□ 0.67
AP000347.1-201ENST00000417194 KIF27Q86VH2 1401 aa19.2■□□□□ 0.66
AP000347.1-201ENST00000417194 TSPY4P0CV99 314 aa19.2■□□□□ 0.66
AP000347.1-201ENST00000417194 TSPY10P0CW01 314 aa19.2■□□□□ 0.66
AP000347.1-201ENST00000417194 PLPPR3Q6T4P5 718 aa19.19■□□□□ 0.66
AP000347.1-201ENST00000417194 CHGAP10645 457 aaKnown RBP19.19■□□□□ 0.66
AP000347.1-201ENST00000417194 STAG3Q9UJ98 1225 aa19.17■□□□□ 0.66
AP000347.1-201ENST00000417194 KCNH8Q96L42 1107 aa19.17■□□□□ 0.66
AP000347.1-201ENST00000417194 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.15■□□□□ 0.666e-7■□□□□ 10.1
AP000347.1-201ENST00000417194 PLEKHD1A6NEE1 506 aa19.13■□□□□ 0.65
AP000347.1-201ENST00000417194 MROH2BQ7Z745 1585 aa19.11■□□□□ 0.65
AP000347.1-201ENST00000417194 ANP32CO43423 234 aa19.11■□□□□ 0.65
AP000347.1-201ENST00000417194 GOLGA3Q08378 1498 aa19.11■□□□□ 0.65
AP000347.1-201ENST00000417194 MYO15BQ96JP2 1530 aa19.06■□□□□ 0.64
AP000347.1-201ENST00000417194 ZNF316A6NFI3 1004 aaPredicted RBP19.05■□□□□ 0.64
AP000347.1-201ENST00000417194 TONSLQ96HA7 1378 aa19.04■□□□□ 0.64
AP000347.1-201ENST00000417194 SMARCA2P51531 1590 aa19.03■□□□□ 0.64
AP000347.1-201ENST00000417194 CEP162Q5TB80 1403 aa19.01■□□□□ 0.63
AP000347.1-201ENST00000417194 CCDC88BA6NC98 1476 aa18.99■□□□□ 0.63
AP000347.1-201ENST00000417194 PDS5BQ9NTI5 1447 aa18.99■□□□□ 0.63
AP000347.1-201ENST00000417194 CEP164Q9UPV0 1460 aa18.99■□□□□ 0.63
AP000347.1-201ENST00000417194 CUX2O14529 1486 aa18.97■□□□□ 0.63
AP000347.1-201ENST00000417194 RRP7BPQ9NSQ0 103 aa18.95■□□□□ 0.62
AP000347.1-201ENST00000417194 CARMIL1Q5VZK9 1371 aa18.95■□□□□ 0.62
AP000347.1-201ENST00000417194 TNIKQ9UKE5 1360 aa18.94■□□□□ 0.62
AP000347.1-201ENST00000417194 DAXXQ9UER7 740 aaPredicted RBP18.93■□□□□ 0.62
AP000347.1-201ENST00000417194 CFDP1Q9UEE9 299 aaPredicted RBP18.93■□□□□ 0.62
AP000347.1-201ENST00000417194 NEFMP07197 916 aa18.91■□□□□ 0.62
AP000347.1-201ENST00000417194 SLC24A1O60721 1099 aa18.9■□□□□ 0.62
AP000347.1-201ENST00000417194 KDM2AQ9Y2K7 1162 aa18.88■□□□□ 0.61
AP000347.1-201ENST00000417194 CLSPNQ9HAW4 1339 aa18.87■□□□□ 0.61
AP000347.1-201ENST00000417194 SOGA1O94964 1423 aa18.87■□□□□ 0.61
AP000347.1-201ENST00000417194 CADPSQ9ULU8 1353 aa18.86■□□□□ 0.61
AP000347.1-201ENST00000417194 TDRD9Q8NDG6 1382 aaKnown RBP18.85■□□□□ 0.61
AP000347.1-201ENST00000417194 ATAD2BQ9ULI0 1458 aa18.82■□□□□ 0.6
AP000347.1-201ENST00000417194 ARID4BQ4LE39 1312 aaPredicted RBP18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms