RNA–Protein interactions for RNA: ENST00000499624.3

GABPB1-AS1-202, GABPB1 antisense RNA 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1-AS1, Length 16,182 nt, Biotype antisense RNA, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-AS1-202ENST00000499624 NISCHQ9Y2I1 1504 aa7.99□□□□□ -1.13
GABPB1-AS1-202ENST00000499624 FAM9AQ8IZU1 332 aaPredicted RBP7.6□□□□□ -1.19
GABPB1-AS1-202ENST00000499624 CCDC180Q9P1Z9 1646 aa7.55□□□□□ -1.2
GABPB1-AS1-202ENST00000499624 DCAF8L2P0C7V8 631 aa7.32□□□□□ -1.24
GABPB1-AS1-202ENST00000499624 PELP1Q8IZL8 1130 aaKnown RBP7.25□□□□□ -1.25
GABPB1-AS1-202ENST00000499624 ACIN1Q9UKV3 1341 aaKnown RBP7.08□□□□□ -1.28
GABPB1-AS1-202ENST00000499624 SHROOM4Q9ULL8 1493 aa7□□□□□ -1.29
GABPB1-AS1-202ENST00000499624 MYO15BQ96JP2 1530 aa6.99□□□□□ -1.29
GABPB1-AS1-202ENST00000499624 RB1CC1Q8TDY2 1594 aa6.96□□□□□ -1.29
GABPB1-AS1-202ENST00000499624 APLP2Q06481 763 aa6.96□□□□□ -1.3
GABPB1-AS1-202ENST00000499624 NACADO15069 1562 aa6.92□□□□□ -1.3
GABPB1-AS1-202ENST00000499624 BAZ1BQ9UIG0 1483 aaKnown RBP6.92□□□□□ -1.3
GABPB1-AS1-202ENST00000499624 DCAF1Q9Y4B6 1507 aa6.9□□□□□ -1.31
GABPB1-AS1-202ENST00000499624 CCER1Q8TC90 406 aaPredicted RBP6.85□□□□□ -1.31
GABPB1-AS1-202ENST00000499624 YTHDC1Q96MU7 727 aaKnown RBP6.83□□□□□ -1.32
GABPB1-AS1-202ENST00000499624 ZEB1P37275 1124 aaPredicted RBP6.81□□□□□ -1.32
GABPB1-AS1-202ENST00000499624 SCAF1Q9H7N4 1312 aaKnown RBP6.74□□□□□ -1.33
GABPB1-AS1-202ENST00000499624 MYT1Q01538 1121 aa6.72□□□□□ -1.33
GABPB1-AS1-202ENST00000499624 NEFMP07197 916 aa6.69□□□□□ -1.34
GABPB1-AS1-202ENST00000499624 SUPT5HO00267 1087 aaKnown RBP6.65□□□□□ -1.34
GABPB1-AS1-202ENST00000499624 ABCC9O60706 1549 aa6.65□□□□□ -1.35
GABPB1-AS1-202ENST00000499624 ZCCHC6Q5VYS8 1495 aaKnown RBP6.64□□□□□ -1.35
GABPB1-AS1-202ENST00000499624 SLC24A1O60721 1099 aa6.64□□□□□ -1.35
GABPB1-AS1-202ENST00000499624 EEA1Q15075 1411 aa6.64□□□□□ -1.35
GABPB1-AS1-202ENST00000499624 SMARCA2P51531 1590 aa6.62□□□□□ -1.35
GABPB1-AS1-202ENST00000499624 ANO8Q9HCE9 1232 aaPredicted RBP6.62□□□□□ -1.35
GABPB1-AS1-202ENST00000499624 BAZ1AQ9NRL2 1556 aaPredicted RBP6.58□□□□□ -1.36
GABPB1-AS1-202ENST00000499624 ABCC8Q09428 1581 aa6.58□□□□□ -1.36
GABPB1-AS1-202ENST00000499624 CEP162Q5TB80 1403 aa6.57□□□□□ -1.36
GABPB1-AS1-202ENST00000499624 EIF5BO60841 1220 aaKnown RBP6.54□□□□□ -1.36
GABPB1-AS1-202ENST00000499624 CLSPNQ9HAW4 1339 aa6.53□□□□□ -1.36
GABPB1-AS1-202ENST00000499624 CDK11AQ9UQ88 783 aaPredicted RBP6.51□□□□□ -1.37
GABPB1-AS1-202ENST00000499624 CENPBP07199 599 aaPredicted RBP6.49□□□□□ -1.37
GABPB1-AS1-202ENST00000499624 PRDM2Q13029 1718 aa6.48□□□□□ -1.37
GABPB1-AS1-202ENST00000499624 AEBP2Q6ZN18 517 aaPredicted RBP6.47□□□□□ -1.37
GABPB1-AS1-202ENST00000499624 CSRNP3Q8WYN3 585 aa6.44□□□□□ -1.38
GABPB1-AS1-202ENST00000499624 HMGB2P26583 209 aaKnown RBP6.41□□□□□ -1.38
GABPB1-AS1-202ENST00000499624 TTBK1Q5TCY1 1321 aaPredicted RBP6.41□□□□□ -1.38
GABPB1-AS1-202ENST00000499624 TRIM41Q8WV44 630 aa6.41□□□□□ -1.38
GABPB1-AS1-202ENST00000499624 WDR97A6NE52 1622 aa6.39□□□□□ -1.39
GABPB1-AS1-202ENST00000499624 NEFLP07196 543 aa6.38□□□□□ -1.39
GABPB1-AS1-202ENST00000499624 KIF21AQ7Z4S6 1674 aa6.36□□□□□ -1.39
GABPB1-AS1-202ENST00000499624 RSF1Q96T23 1441 aaPredicted RBP6.36□□□□□ -1.39
GABPB1-AS1-202ENST00000499624 PABPN1Q86U42 306 aaKnown RBP eCLIP6.36□□□□□ -1.396e-10■■□□□ 13.7
GABPB1-AS1-202ENST00000499624 ARID4BQ4LE39 1312 aaPredicted RBP6.35□□□□□ -1.39
GABPB1-AS1-202ENST00000499624 FHAD1B1AJZ9 1412 aa6.35□□□□□ -1.39
GABPB1-AS1-202ENST00000499624 SCRIBQ14160 1630 aa6.34□□□□□ -1.39
GABPB1-AS1-202ENST00000499624 CHMP4AQ9BY43 222 aa6.32□□□□□ -1.4
GABPB1-AS1-202ENST00000499624 EHMT2Q96KQ7 1210 aa6.32□□□□□ -1.4
GABPB1-AS1-202ENST00000499624 PDS5BQ9NTI5 1447 aa6.31□□□□□ -1.4
GABPB1-AS1-202ENST00000499624 GOLGA3Q08378 1498 aa6.3□□□□□ -1.4
GABPB1-AS1-202ENST00000499624 ERCC6Q03468 1493 aa6.3□□□□□ -1.4
GABPB1-AS1-202ENST00000499624 CLIP1P30622 1438 aa6.29□□□□□ -1.4
GABPB1-AS1-202ENST00000499624 DAXXQ9UER7 740 aaPredicted RBP6.28□□□□□ -1.4
GABPB1-AS1-202ENST00000499624 HMGXB3Q12766 1538 aa6.28□□□□□ -1.4
GABPB1-AS1-202ENST00000499624 ESF1Q9H501 851 aaKnown RBP6.28□□□□□ -1.4
GABPB1-AS1-202ENST00000499624 ERICH6Q7L0X2 663 aa6.28□□□□□ -1.4
GABPB1-AS1-202ENST00000499624 NPM1P06748 294 aaKnown RBP eCLIP6.28□□□□□ -1.4
GABPB1-AS1-202ENST00000499624 HAP1P54257 671 aaPredicted RBP6.28□□□□□ -1.4
GABPB1-AS1-202ENST00000499624 UBTFP17480 764 aaKnown RBP6.27□□□□□ -1.41
GABPB1-AS1-202ENST00000499624 MYT1LQ9UL68 1186 aa6.27□□□□□ -1.41
GABPB1-AS1-202ENST00000499624 CFAP44Q96MT7 982 aa6.27□□□□□ -1.41
GABPB1-AS1-202ENST00000499624 CEP164Q9UPV0 1460 aa6.27□□□□□ -1.41
GABPB1-AS1-202ENST00000499624 FOXD1Q16676 465 aa6.27□□□□□ -1.41
GABPB1-AS1-202ENST00000499624 CHMP4BQ9H444 224 aaKnown RBP6.25□□□□□ -1.41
GABPB1-AS1-202ENST00000499624 KAT6BQ8WYB5 2073 aa6.25□□□□□ -1.41
GABPB1-AS1-202ENST00000499624 CDCA8Q53HL2 280 aa6.24□□□□□ -1.41
GABPB1-AS1-202ENST00000499624 KIF27Q86VH2 1401 aa6.24□□□□□ -1.41
GABPB1-AS1-202ENST00000499624 LAMC3Q9Y6N6 1575 aa6.24□□□□□ -1.41
GABPB1-AS1-202ENST00000499624 TOP2AP11388 1531 aaKnown RBP6.24□□□□□ -1.41
GABPB1-AS1-202ENST00000499624 SCAPERQ9BY12 1400 aa6.23□□□□□ -1.41
GABPB1-AS1-202ENST00000499624 CUL7Q14999 1698 aa6.23□□□□□ -1.41
GABPB1-AS1-202ENST00000499624 CARMIL2Q6F5E8 1435 aa6.23□□□□□ -1.41
GABPB1-AS1-202ENST00000499624 ZBTB47Q9UFB7 747 aaPredicted RBP6.22□□□□□ -1.41
GABPB1-AS1-202ENST00000499624 HDGFP51858 240 aaKnown RBP6.22□□□□□ -1.41
GABPB1-AS1-202ENST00000499624 RANGAP1P46060 587 aaPredicted RBP6.22□□□□□ -1.41
GABPB1-AS1-202ENST00000499624 FMN1Q68DA7 1419 aa6.21□□□□□ -1.42
GABPB1-AS1-202ENST00000499624 WWC1Q8IX03 1113 aa6.2□□□□□ -1.42
GABPB1-AS1-202ENST00000499624 SMARCA4P51532 1647 aa6.2□□□□□ -1.42
GABPB1-AS1-202ENST00000499624 SETD5Q9C0A6 1442 aa6.2□□□□□ -1.42
GABPB1-AS1-202ENST00000499624 CCDC18Q5T9S5 1454 aa6.2□□□□□ -1.42
GABPB1-AS1-202ENST00000499624 ATP1B4Q9UN42 357 aaPredicted RBP6.19□□□□□ -1.42
GABPB1-AS1-202ENST00000499624 STAC3Q96MF2 364 aa6.18□□□□□ -1.42
GABPB1-AS1-202ENST00000499624 CC2D2AQ9P2K1 1620 aa6.17□□□□□ -1.42
GABPB1-AS1-202ENST00000499624 CUX1P39880 1505 aa6.17□□□□□ -1.42
GABPB1-AS1-202ENST00000499624 WRNQ14191 1432 aaPredicted RBP eCLIP6.17□□□□□ -1.42
GABPB1-AS1-202ENST00000499624 ANP32EQ9BTT0 268 aa6.17□□□□□ -1.42
GABPB1-AS1-202ENST00000499624 UACAQ9BZF9 1416 aa6.17□□□□□ -1.42
GABPB1-AS1-202ENST00000499624 TRIM26Q12899 539 aaPredicted RBP6.17□□□□□ -1.42
GABPB1-AS1-202ENST00000499624 TIMELESSQ9UNS1 1208 aa6.16□□□□□ -1.42
GABPB1-AS1-202ENST00000499624 EIF4G2P78344 907 aaKnown RBP eCLIP6.15□□□□□ -1.42
GABPB1-AS1-202ENST00000499624 PLPPR3Q6T4P5 718 aa6.15□□□□□ -1.42
GABPB1-AS1-202ENST00000499624 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP6.15□□□□□ -1.42
GABPB1-AS1-202ENST00000499624 HNRNPUL2Q1KMD3 747 aaKnown RBP6.15□□□□□ -1.42
GABPB1-AS1-202ENST00000499624 RSPH4AQ5TD94 716 aa6.15□□□□□ -1.43
GABPB1-AS1-202ENST00000499624 KANK1Q14678 1352 aa6.14□□□□□ -1.43
GABPB1-AS1-202ENST00000499624 EFCAB5A4FU69 1503 aa6.13□□□□□ -1.43
GABPB1-AS1-202ENST00000499624 UNC13AQ9UPW8 1703 aa6.13□□□□□ -1.43
GABPB1-AS1-202ENST00000499624 NEUROD1Q13562 356 aa6.13□□□□□ -1.43
GABPB1-AS1-202ENST00000499624 GOLGA6L2Q8N9W4 650 aaPredicted RBP6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms