RNA–Protein interactions for RNA: ENST00000513042.6

ARHGEF28-212, Transcript of Rho guanine nucleotide exchange factor 28, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene ARHGEF28, Length 6,273 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28-212ENST00000513042 DCAF8L2P0C7V8 631 aa29.99■■■□□ 2.39
ARHGEF28-212ENST00000513042 SUPT5HO00267 1087 aaKnown RBP28.49■■■□□ 2.15
ARHGEF28-212ENST00000513042 EHMT2Q96KQ7 1210 aa28.17■■■□□ 2.1
ARHGEF28-212ENST00000513042 SHROOM4Q9ULL8 1493 aa27.92■■■□□ 2.06
ARHGEF28-212ENST00000513042 PELP1Q8IZL8 1130 aaKnown RBP27.57■■■□□ 2
ARHGEF28-212ENST00000513042 TTBK1Q5TCY1 1321 aaPredicted RBP27.22■■□□□ 1.95
ARHGEF28-212ENST00000513042 NISCHQ9Y2I1 1504 aa27.21■■□□□ 1.95
ARHGEF28-212ENST00000513042 APLP2Q06481 763 aa27.2■■□□□ 1.95
ARHGEF28-212ENST00000513042 FAM9AQ8IZU1 332 aaPredicted RBP27.05■■□□□ 1.92
ARHGEF28-212ENST00000513042 PCGF6Q9BYE7 350 aa26.84■■□□□ 1.89
ARHGEF28-212ENST00000513042 RANGAP1P46060 587 aaPredicted RBP26.77■■□□□ 1.88
ARHGEF28-212ENST00000513042 ERICH6Q7L0X2 663 aa26.74■■□□□ 1.87
ARHGEF28-212ENST00000513042 ATP1B4Q9UN42 357 aaPredicted RBP26.47■■□□□ 1.83
ARHGEF28-212ENST00000513042 CENPBP07199 599 aaPredicted RBP26.47■■□□□ 1.83
ARHGEF28-212ENST00000513042 CCER1Q8TC90 406 aaPredicted RBP26.42■■□□□ 1.82
ARHGEF28-212ENST00000513042 YTHDC1Q96MU7 727 aaKnown RBP26.28■■□□□ 1.8
ARHGEF28-212ENST00000513042 TRIM41Q8WV44 630 aa26.19■■□□□ 1.78
ARHGEF28-212ENST00000513042 ZEB1P37275 1124 aaPredicted RBP26.18■■□□□ 1.78
ARHGEF28-212ENST00000513042 UBTFP17480 764 aaKnown RBP26.06■■□□□ 1.76
ARHGEF28-212ENST00000513042 NEFLP07196 543 aa26.03■■□□□ 1.76
ARHGEF28-212ENST00000513042 PPARGC1BQ86YN6 1023 aaKnown RBP26■■□□□ 1.75
ARHGEF28-212ENST00000513042 MYT1Q01538 1121 aa25.67■■□□□ 1.7
ARHGEF28-212ENST00000513042 POLR3GLQ9BT43 218 aa25.6■■□□□ 1.69
ARHGEF28-212ENST00000513042 ITGAEP38570 1179 aa25.54■■□□□ 1.68
ARHGEF28-212ENST00000513042 CNGB1Q14028 1251 aaPredicted RBP25.48■■□□□ 1.67
ARHGEF28-212ENST00000513042 DAXXQ9UER7 740 aaPredicted RBP25.46■■□□□ 1.67
ARHGEF28-212ENST00000513042 MYT1LQ9UL68 1186 aa25.45■■□□□ 1.66
ARHGEF28-212ENST00000513042 TRIM26Q12899 539 aaPredicted RBP25.38■■□□□ 1.65
ARHGEF28-212ENST00000513042 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.35■■□□□ 1.65
ARHGEF28-212ENST00000513042 HNRNPUL2Q1KMD3 747 aaKnown RBP25.35■■□□□ 1.65
ARHGEF28-212ENST00000513042 HRCP23327 699 aa25.27■■□□□ 1.64
ARHGEF28-212ENST00000513042 CHIC1Q5VXU3 224 aa25.25■■□□□ 1.63
ARHGEF28-212ENST00000513042 LOC105371045A0A1W2PR82 267 aa25.15■■□□□ 1.62
ARHGEF28-212ENST00000513042 SLC4A1APQ9BWU0 796 aaKnown RBP25.11■■□□□ 1.61
ARHGEF28-212ENST00000513042 ZNF316A6NFI3 1004 aaPredicted RBP24.91■■□□□ 1.58
ARHGEF28-212ENST00000513042 CLSPNQ9HAW4 1339 aa24.89■■□□□ 1.57
ARHGEF28-212ENST00000513042 RTL5Q5HYW3 569 aaPredicted RBP24.82■■□□□ 1.56
ARHGEF28-212ENST00000513042 DIEXFQ68CQ4 756 aaKnown RBP24.77■■□□□ 1.56
ARHGEF28-212ENST00000513042 FAM50AQ14320 339 aaKnown RBP24.72■■□□□ 1.55
ARHGEF28-212ENST00000513042 BCANQ96GW7 911 aa24.71■■□□□ 1.55
ARHGEF28-212ENST00000513042 NEUROD1Q13562 356 aa24.65■■□□□ 1.54
ARHGEF28-212ENST00000513042 TRIM52Q96A61 297 aa24.64■■□□□ 1.53
ARHGEF28-212ENST00000513042 ZNF326Q5BKZ1 582 aaKnown RBP24.49■■□□□ 1.51
ARHGEF28-212ENST00000513042 BCL11AQ9H165 835 aa24.47■■□□□ 1.51
ARHGEF28-212ENST00000513042 GTF3C3Q9Y5Q9 886 aa24.42■■□□□ 1.5
ARHGEF28-212ENST00000513042 SLC24A1O60721 1099 aa24.32■■□□□ 1.48
ARHGEF28-212ENST00000513042 ANP32CO43423 234 aa24.32■■□□□ 1.48
ARHGEF28-212ENST00000513042 CDK11AQ9UQ88 783 aaPredicted RBP24.3■■□□□ 1.48
ARHGEF28-212ENST00000513042 ZBTB47Q9UFB7 747 aaPredicted RBP24.28■■□□□ 1.48
ARHGEF28-212ENST00000513042 CANXP27824 592 aaKnown RBP24.23■■□□□ 1.47
ARHGEF28-212ENST00000513042 PABPN1Q86U42 306 aaKnown RBP eCLIP24.18■■□□□ 1.46
ARHGEF28-212ENST00000513042 FBLN2P98095 1184 aa24.12■■□□□ 1.45
ARHGEF28-212ENST00000513042 ARID3CA6NKF2 412 aa24.11■■□□□ 1.45
ARHGEF28-212ENST00000513042 NPM2Q86SE8 214 aaKnown RBP24.05■■□□□ 1.44
ARHGEF28-212ENST00000513042 P3H3Q8IVL6 736 aa24.01■■□□□ 1.43
ARHGEF28-212ENST00000513042 NEFMP07197 916 aa23.92■■□□□ 1.42
ARHGEF28-212ENST00000513042 ANP32AP39687 249 aaKnown RBP23.92■■□□□ 1.42
ARHGEF28-212ENST00000513042 ABCC9O60706 1549 aa23.89■■□□□ 1.41
ARHGEF28-212ENST00000513042 ZNF777Q9ULD5 760 aaPredicted RBP23.87■■□□□ 1.41
ARHGEF28-212ENST00000513042 ACIN1Q9UKV3 1341 aaKnown RBP23.85■■□□□ 1.41
ARHGEF28-212ENST00000513042 FKBP8Q14318 412 aa23.75■■□□□ 1.39
ARHGEF28-212ENST00000513042 EIF5BO60841 1220 aaKnown RBP23.72■■□□□ 1.39
ARHGEF28-212ENST00000513042 PLPPR3Q6T4P5 718 aa23.69■■□□□ 1.38
ARHGEF28-212ENST00000513042 SALL2Q9Y467 1007 aaPredicted RBP23.67■■□□□ 1.38
ARHGEF28-212ENST00000513042 HSP90AA1P07900 732 aaKnown RBP23.66■■□□□ 1.38
ARHGEF28-212ENST00000513042 CHGAP10645 457 aaKnown RBP23.63■■□□□ 1.37
ARHGEF28-212ENST00000513042 FAM9BQ8IZU0 186 aa23.63■■□□□ 1.37
ARHGEF28-212ENST00000513042 ANP32BQ92688 251 aaKnown RBP23.6■■□□□ 1.37
ARHGEF28-212ENST00000513042 HNRNPUQ00839 825 aaKnown RBP eCLIP23.58■■□□□ 1.37
ARHGEF28-212ENST00000513042 ARXQ96QS3 562 aa23.55■■□□□ 1.36
ARHGEF28-212ENST00000513042 NBR1Q14596 966 aa23.53■■□□□ 1.36
ARHGEF28-212ENST00000513042 DDX10Q13206 875 aaKnown RBP23.52■■□□□ 1.36
ARHGEF28-212ENST00000513042 STAG3Q9UJ98 1225 aa23.51■■□□□ 1.35
ARHGEF28-212ENST00000513042 TONSLQ96HA7 1378 aa23.51■■□□□ 1.35
ARHGEF28-212ENST00000513042 CSRNP3Q8WYN3 585 aa23.51■■□□□ 1.35
ARHGEF28-212ENST00000513042 ESF1Q9H501 851 aaKnown RBP23.48■■□□□ 1.35
ARHGEF28-212ENST00000513042 UPF2Q9HAU5 1272 aaKnown RBP23.48■■□□□ 1.35
ARHGEF28-212ENST00000513042 CHIC2Q9UKJ5 165 aa23.39■■□□□ 1.33
ARHGEF28-212ENST00000513042 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.38■■□□□ 1.331e-6■■□□□ 13.1
ARHGEF28-212ENST00000513042 IRX6P78412 446 aaPredicted RBP23.37■■□□□ 1.33
ARHGEF28-212ENST00000513042 CCDC136Q96JN2 1154 aa23.36■■□□□ 1.33
ARHGEF28-212ENST00000513042 TMC1Q8TDI8 760 aa23.32■■□□□ 1.32
ARHGEF28-212ENST00000513042 SENP3Q9H4L4 574 aaPredicted RBP23.3■■□□□ 1.32
ARHGEF28-212ENST00000513042 KDM2AQ9Y2K7 1162 aa23.29■■□□□ 1.32
ARHGEF28-212ENST00000513042 WDR43Q15061 677 aaKnown RBP eCLIP23.27■■□□□ 1.32
ARHGEF28-212ENST00000513042 HIRIP3Q9BW71 556 aaPredicted RBP23.26■■□□□ 1.31
ARHGEF28-212ENST00000513042 SCAF1Q9H7N4 1312 aaKnown RBP23.25■■□□□ 1.31
ARHGEF28-212ENST00000513042 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.24■■□□□ 1.31
ARHGEF28-212ENST00000513042 MRS2Q9HD23 443 aa23.21■■□□□ 1.31
ARHGEF28-212ENST00000513042 PLEKHG5O94827 1062 aa23.2■■□□□ 1.3
ARHGEF28-212ENST00000513042 ZBTB7CA1YPR0 619 aa23.17■■□□□ 1.3
ARHGEF28-212ENST00000513042 A0A0G2JS52 829 aa23.16■■□□□ 1.3
ARHGEF28-212ENST00000513042 GLIPR1L2Q4G1C9 344 aa23.15■■□□□ 1.3
ARHGEF28-212ENST00000513042 SCRIBQ14160 1630 aa23.13■■□□□ 1.29
ARHGEF28-212ENST00000513042 SENP3-EIF4A1A0A087X0R7 540 aa23.12■■□□□ 1.29
ARHGEF28-212ENST00000513042 MIER1Q8N108 512 aa23.11■■□□□ 1.29
ARHGEF28-212ENST00000513042 NPM1P06748 294 aaKnown RBP eCLIP23.1■■□□□ 1.29
ARHGEF28-212ENST00000513042 MYH16Q9H6N6 1097 aa23.06■■□□□ 1.28
ARHGEF28-212ENST00000513042 C14orf37Q86TY3 774 aa23■■□□□ 1.27
ARHGEF28-212ENST00000513042 DCAF1Q9Y4B6 1507 aa22.99■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms