Protein–RNA interactions for Protein: Q9Y6H5

SNCAIP, Synphilin-1, humanhuman

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIPQ9Y6H5 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC29.51■■■□□ 2.31
SNCAIPQ9Y6H5 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC29.51■■■□□ 2.31
SNCAIPQ9Y6H5 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC29.5■■■□□ 2.31
SNCAIPQ9Y6H5 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC29.5■■■□□ 2.31
SNCAIPQ9Y6H5 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC29.5■■■□□ 2.31
SNCAIPQ9Y6H5 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC29.49■■■□□ 2.31
SNCAIPQ9Y6H5 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC29.49■■■□□ 2.31
SNCAIPQ9Y6H5 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC29.49■■■□□ 2.31
SNCAIPQ9Y6H5 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC29.49■■■□□ 2.31
SNCAIPQ9Y6H5 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC29.49■■■□□ 2.31
SNCAIPQ9Y6H5 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC29.49■■■□□ 2.31
SNCAIPQ9Y6H5 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC29.48■■■□□ 2.31
SNCAIPQ9Y6H5 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC29.48■■■□□ 2.31
SNCAIPQ9Y6H5 DUX4L9-201ENST00000449051 1259 ntBASIC29.48■■■□□ 2.31
SNCAIPQ9Y6H5 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC29.48■■■□□ 2.31
SNCAIPQ9Y6H5 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC29.48■■■□□ 2.31
SNCAIPQ9Y6H5 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC29.48■■■□□ 2.31
SNCAIPQ9Y6H5 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC29.47■■■□□ 2.31
SNCAIPQ9Y6H5 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC29.46■■■□□ 2.31
SNCAIPQ9Y6H5 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC29.46■■■□□ 2.31
SNCAIPQ9Y6H5 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC29.46■■■□□ 2.31
SNCAIPQ9Y6H5 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC29.45■■■□□ 2.31
SNCAIPQ9Y6H5 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC29.45■■■□□ 2.31
SNCAIPQ9Y6H5 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC29.44■■■□□ 2.3
SNCAIPQ9Y6H5 RP9P-202ENST00000450133 1212 ntBASIC29.44■■■□□ 2.3
SNCAIPQ9Y6H5 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC29.44■■■□□ 2.3
SNCAIPQ9Y6H5 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC29.44■■■□□ 2.3
SNCAIPQ9Y6H5 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC29.43■■■□□ 2.3
SNCAIPQ9Y6H5 SPCS2P3-201ENST00000500401 656 ntBASIC29.43■■■□□ 2.3
SNCAIPQ9Y6H5 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC29.42■■■□□ 2.3
SNCAIPQ9Y6H5 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC29.42■■■□□ 2.3
SNCAIPQ9Y6H5 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC29.42■■■□□ 2.3
SNCAIPQ9Y6H5 AC093536.1-201ENST00000569153 554 ntBASIC29.42■■■□□ 2.3
SNCAIPQ9Y6H5 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC29.42■■■□□ 2.3
SNCAIPQ9Y6H5 RAP2CP1-202ENST00000605179 643 ntBASIC29.42■■■□□ 2.3
SNCAIPQ9Y6H5 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC29.42■■■□□ 2.3
SNCAIPQ9Y6H5 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC29.42■■■□□ 2.3
SNCAIPQ9Y6H5 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
SNCAIPQ9Y6H5 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC29.41■■■□□ 2.3
SNCAIPQ9Y6H5 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC29.41■■■□□ 2.3
SNCAIPQ9Y6H5 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC29.41■■■□□ 2.3
SNCAIPQ9Y6H5 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC29.41■■■□□ 2.3
SNCAIPQ9Y6H5 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC29.41■■■□□ 2.3
SNCAIPQ9Y6H5 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.3
SNCAIPQ9Y6H5 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC29.39■■■□□ 2.3
SNCAIPQ9Y6H5 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC29.39■■■□□ 2.3
SNCAIPQ9Y6H5 TRIR-205ENST00000592273 783 ntTSL 3 BASIC29.39■■■□□ 2.3
SNCAIPQ9Y6H5 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC29.39■■■□□ 2.3
SNCAIPQ9Y6H5 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC29.39■■■□□ 2.3
SNCAIPQ9Y6H5 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.3
SNCAIPQ9Y6H5 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC29.39■■■□□ 2.3
SNCAIPQ9Y6H5 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC29.39■■■□□ 2.3
SNCAIPQ9Y6H5 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC29.38■■■□□ 2.29
SNCAIPQ9Y6H5 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC29.38■■■□□ 2.29
SNCAIPQ9Y6H5 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC29.38■■■□□ 2.29
SNCAIPQ9Y6H5 AC010980.1-201ENST00000587192 1142 ntBASIC29.38■■■□□ 2.29
SNCAIPQ9Y6H5 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC29.38■■■□□ 2.29
SNCAIPQ9Y6H5 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC29.37■■■□□ 2.29
SNCAIPQ9Y6H5 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC29.37■■■□□ 2.29
SNCAIPQ9Y6H5 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC29.37■■■□□ 2.29
SNCAIPQ9Y6H5 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC29.37■■■□□ 2.29
SNCAIPQ9Y6H5 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC29.37■■■□□ 2.29
SNCAIPQ9Y6H5 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC29.35■■■□□ 2.29
SNCAIPQ9Y6H5 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC29.35■■■□□ 2.29
SNCAIPQ9Y6H5 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC29.35■■■□□ 2.29
SNCAIPQ9Y6H5 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC29.34■■■□□ 2.29
SNCAIPQ9Y6H5 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC29.34■■■□□ 2.29
SNCAIPQ9Y6H5 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC29.33■■■□□ 2.29
SNCAIPQ9Y6H5 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC29.33■■■□□ 2.29
SNCAIPQ9Y6H5 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC29.33■■■□□ 2.29
SNCAIPQ9Y6H5 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC29.33■■■□□ 2.29
SNCAIPQ9Y6H5 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC29.32■■■□□ 2.28
SNCAIPQ9Y6H5 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC29.32■■■□□ 2.28
SNCAIPQ9Y6H5 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC29.32■■■□□ 2.28
SNCAIPQ9Y6H5 BHLHE23-202ENST00000612929 1109 ntBASIC29.32■■■□□ 2.28
SNCAIPQ9Y6H5 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC29.32■■■□□ 2.28
SNCAIPQ9Y6H5 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
SNCAIPQ9Y6H5 KRT8P33-201ENST00000508125 1423 ntBASIC29.31■■■□□ 2.28
SNCAIPQ9Y6H5 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
SNCAIPQ9Y6H5 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC29.31■■■□□ 2.28
SNCAIPQ9Y6H5 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC29.3■■■□□ 2.28
SNCAIPQ9Y6H5 PFN2-211ENST00000489155 636 ntTSL 4 BASIC29.3■■■□□ 2.28
SNCAIPQ9Y6H5 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC29.3■■■□□ 2.28
SNCAIPQ9Y6H5 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC29.3■■■□□ 2.28
SNCAIPQ9Y6H5 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC29.3■■■□□ 2.28
SNCAIPQ9Y6H5 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC29.29■■■□□ 2.28
SNCAIPQ9Y6H5 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC29.29■■■□□ 2.28
SNCAIPQ9Y6H5 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC29.28■■■□□ 2.28
SNCAIPQ9Y6H5 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
SNCAIPQ9Y6H5 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
SNCAIPQ9Y6H5 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
SNCAIPQ9Y6H5 BEX3-202ENST00000372634 753 ntTSL 2 BASIC29.28■■■□□ 2.28
SNCAIPQ9Y6H5 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC29.28■■■□□ 2.28
SNCAIPQ9Y6H5 AC074183.2-201ENST00000623112 922 ntBASIC29.28■■■□□ 2.28
SNCAIPQ9Y6H5 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC29.28■■■□□ 2.28
SNCAIPQ9Y6H5 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC29.28■■■□□ 2.28
SNCAIPQ9Y6H5 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC29.27■■■□□ 2.28
SNCAIPQ9Y6H5 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC29.27■■■□□ 2.28
SNCAIPQ9Y6H5 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC29.27■■■□□ 2.28
SNCAIPQ9Y6H5 MIR3960-201ENST00000583311 91 ntBASIC29.27■■■□□ 2.28
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms