Protein–RNA interactions for Protein: Q9Y5S2

CDC42BPB, Serine/threonine-protein kinase MRCK beta, humanhuman

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPBQ9Y5S2 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC38.61■■■■□ 3.77
CDC42BPBQ9Y5S2 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC38.61■■■■□ 3.77
CDC42BPBQ9Y5S2 SPCS2P3-201ENST00000500401 656 ntBASIC38.6■■■■□ 3.77
CDC42BPBQ9Y5S2 RAP2CP1-202ENST00000605179 643 ntBASIC38.6■■■■□ 3.77
CDC42BPBQ9Y5S2 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC38.6■■■■□ 3.77
CDC42BPBQ9Y5S2 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC38.6■■■■□ 3.77
CDC42BPBQ9Y5S2 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC38.6■■■■□ 3.77
CDC42BPBQ9Y5S2 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC38.6■■■■□ 3.77
CDC42BPBQ9Y5S2 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC38.6■■■■□ 3.77
CDC42BPBQ9Y5S2 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC38.59■■■■□ 3.77
CDC42BPBQ9Y5S2 AC093536.1-201ENST00000569153 554 ntBASIC38.59■■■■□ 3.77
CDC42BPBQ9Y5S2 AC026202.3-201ENST00000600805 1127 ntBASIC38.59■■■■□ 3.77
CDC42BPBQ9Y5S2 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC38.58■■■■□ 3.77
CDC42BPBQ9Y5S2 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC38.58■■■■□ 3.77
CDC42BPBQ9Y5S2 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC38.58■■■■□ 3.77
CDC42BPBQ9Y5S2 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC38.58■■■■□ 3.77
CDC42BPBQ9Y5S2 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC38.58■■■■□ 3.77
CDC42BPBQ9Y5S2 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC38.58■■■■□ 3.77
CDC42BPBQ9Y5S2 DUX4L18-201ENST00000553347 1267 ntBASIC38.58■■■■□ 3.77
CDC42BPBQ9Y5S2 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC38.57■■■■□ 3.77
CDC42BPBQ9Y5S2 SMPD5-203ENST00000639008 1464 ntBASIC38.56■■■■□ 3.76
CDC42BPBQ9Y5S2 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC38.56■■■■□ 3.76
CDC42BPBQ9Y5S2 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC38.55■■■■□ 3.76
CDC42BPBQ9Y5S2 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC38.55■■■■□ 3.76
CDC42BPBQ9Y5S2 AL035685.1-201ENST00000636663 812 ntBASIC38.55■■■■□ 3.76
CDC42BPBQ9Y5S2 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC38.55■■■■□ 3.76
CDC42BPBQ9Y5S2 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC38.55■■■■□ 3.76
CDC42BPBQ9Y5S2 TRIR-205ENST00000592273 783 ntTSL 3 BASIC38.52■■■■□ 3.76
CDC42BPBQ9Y5S2 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC38.52■■■■□ 3.76
CDC42BPBQ9Y5S2 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC38.52■■■■□ 3.76
CDC42BPBQ9Y5S2 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC38.52■■■■□ 3.76
CDC42BPBQ9Y5S2 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC38.52■■■■□ 3.76
CDC42BPBQ9Y5S2 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC38.51■■■■□ 3.76
CDC42BPBQ9Y5S2 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC38.51■■■■□ 3.76
CDC42BPBQ9Y5S2 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC38.5■■■■□ 3.75
CDC42BPBQ9Y5S2 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC38.5■■■■□ 3.75
CDC42BPBQ9Y5S2 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC38.49■■■■□ 3.75
CDC42BPBQ9Y5S2 AL359258.2-201ENST00000564063 1566 ntBASIC38.49■■■■□ 3.75
CDC42BPBQ9Y5S2 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC38.48■■■■□ 3.75
CDC42BPBQ9Y5S2 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC38.48■■■■□ 3.75
CDC42BPBQ9Y5S2 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC38.48■■■■□ 3.75
CDC42BPBQ9Y5S2 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC38.48■■■■□ 3.75
CDC42BPBQ9Y5S2 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC38.48■■■■□ 3.75
CDC42BPBQ9Y5S2 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC38.48■■■■□ 3.75
CDC42BPBQ9Y5S2 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC38.47■■■■□ 3.75
CDC42BPBQ9Y5S2 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC38.46■■■■□ 3.75
CDC42BPBQ9Y5S2 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC38.46■■■■□ 3.75
CDC42BPBQ9Y5S2 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC38.46■■■■□ 3.75
CDC42BPBQ9Y5S2 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC38.46■■■■□ 3.75
CDC42BPBQ9Y5S2 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC38.45■■■■□ 3.75
CDC42BPBQ9Y5S2 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC38.45■■■■□ 3.75
CDC42BPBQ9Y5S2 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC38.44■■■■□ 3.74
CDC42BPBQ9Y5S2 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC38.44■■■■□ 3.74
CDC42BPBQ9Y5S2 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC38.44■■■■□ 3.74
CDC42BPBQ9Y5S2 RP9P-202ENST00000450133 1212 ntBASIC38.43■■■■□ 3.74
CDC42BPBQ9Y5S2 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC38.43■■■■□ 3.74
CDC42BPBQ9Y5S2 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC38.43■■■■□ 3.74
CDC42BPBQ9Y5S2 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC38.43■■■■□ 3.74
CDC42BPBQ9Y5S2 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC38.43■■■■□ 3.74
CDC42BPBQ9Y5S2 BEX3-202ENST00000372634 753 ntTSL 2 BASIC38.43■■■■□ 3.74
CDC42BPBQ9Y5S2 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC38.42■■■■□ 3.74
CDC42BPBQ9Y5S2 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC38.42■■■■□ 3.74
CDC42BPBQ9Y5S2 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC38.41■■■■□ 3.74
CDC42BPBQ9Y5S2 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC38.41■■■■□ 3.74
CDC42BPBQ9Y5S2 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC38.41■■■■□ 3.74
CDC42BPBQ9Y5S2 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC38.4■■■■□ 3.74
CDC42BPBQ9Y5S2 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC38.4■■■■□ 3.74
CDC42BPBQ9Y5S2 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC38.4■■■■□ 3.74
CDC42BPBQ9Y5S2 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC38.38■■■■□ 3.73
CDC42BPBQ9Y5S2 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC38.36■■■■□ 3.73
CDC42BPBQ9Y5S2 AC009299.2-201ENST00000482477 511 ntBASIC38.35■■■■□ 3.73
CDC42BPBQ9Y5S2 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC38.35■■■■□ 3.73
CDC42BPBQ9Y5S2 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC38.35■■■■□ 3.73
CDC42BPBQ9Y5S2 PFN2-211ENST00000489155 636 ntTSL 4 BASIC38.35■■■■□ 3.73
CDC42BPBQ9Y5S2 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC38.35■■■■□ 3.73
CDC42BPBQ9Y5S2 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC38.33■■■■□ 3.73
CDC42BPBQ9Y5S2 PVT1_1.1-201ENST00000615125 194 ntBASIC38.33■■■■□ 3.73
CDC42BPBQ9Y5S2 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC38.33■■■■□ 3.73
CDC42BPBQ9Y5S2 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC38.33■■■■□ 3.73
CDC42BPBQ9Y5S2 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC38.32■■■■□ 3.73
CDC42BPBQ9Y5S2 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC38.32■■■■□ 3.73
CDC42BPBQ9Y5S2 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC38.32■■■■□ 3.73
CDC42BPBQ9Y5S2 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC38.32■■■■□ 3.72
CDC42BPBQ9Y5S2 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC38.32■■■■□ 3.72
CDC42BPBQ9Y5S2 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC38.32■■■■□ 3.72
CDC42BPBQ9Y5S2 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC38.31■■■■□ 3.72
CDC42BPBQ9Y5S2 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC38.31■■■■□ 3.72
CDC42BPBQ9Y5S2 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC38.31■■■■□ 3.72
CDC42BPBQ9Y5S2 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC38.3■■■■□ 3.72
CDC42BPBQ9Y5S2 AC010980.1-201ENST00000587192 1142 ntBASIC38.29■■■■□ 3.72
CDC42BPBQ9Y5S2 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC38.29■■■■□ 3.72
CDC42BPBQ9Y5S2 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC38.29■■■■□ 3.72
CDC42BPBQ9Y5S2 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC38.29■■■■□ 3.72
CDC42BPBQ9Y5S2 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC38.29■■■■□ 3.72
CDC42BPBQ9Y5S2 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC38.29■■■■□ 3.72
CDC42BPBQ9Y5S2 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC38.29■■■■□ 3.72
CDC42BPBQ9Y5S2 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC38.26■■■■□ 3.72
CDC42BPBQ9Y5S2 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC38.26■■■■□ 3.71
CDC42BPBQ9Y5S2 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC38.26■■■■□ 3.71
CDC42BPBQ9Y5S2 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC38.25■■■■□ 3.71
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms