Protein–RNA interactions for Protein: Q9HBM1

SPC25, Kinetochore protein Spc25, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPC25Q9HBM1 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC28.14■■■□□ 2.1
SPC25Q9HBM1 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC28.14■■■□□ 2.09
SPC25Q9HBM1 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.09
SPC25Q9HBM1 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC28.13■■■□□ 2.09
SPC25Q9HBM1 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC28.13■■■□□ 2.09
SPC25Q9HBM1 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC28.13■■■□□ 2.09
SPC25Q9HBM1 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC28.13■■■□□ 2.09
SPC25Q9HBM1 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC28.12■■■□□ 2.09
SPC25Q9HBM1 RP9P-202ENST00000450133 1212 ntBASIC28.12■■■□□ 2.09
SPC25Q9HBM1 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC28.12■■■□□ 2.09
SPC25Q9HBM1 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC28.11■■■□□ 2.09
SPC25Q9HBM1 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC28.11■■■□□ 2.09
SPC25Q9HBM1 AC025884.2-201ENST00000553429 711 ntBASIC28.11■■■□□ 2.09
SPC25Q9HBM1 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
SPC25Q9HBM1 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC28.1■■■□□ 2.09
SPC25Q9HBM1 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC28.09■■■□□ 2.09
SPC25Q9HBM1 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
SPC25Q9HBM1 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC28.08■■■□□ 2.09
SPC25Q9HBM1 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC28.08■■■□□ 2.08
SPC25Q9HBM1 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC28.07■■■□□ 2.08
SPC25Q9HBM1 BHLHE23-202ENST00000612929 1109 ntBASIC28.07■■■□□ 2.08
SPC25Q9HBM1 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
SPC25Q9HBM1 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC28.07■■■□□ 2.08
SPC25Q9HBM1 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC28.07■■■□□ 2.08
SPC25Q9HBM1 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC28.06■■■□□ 2.08
SPC25Q9HBM1 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC28.06■■■□□ 2.08
SPC25Q9HBM1 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC28.06■■■□□ 2.08
SPC25Q9HBM1 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC28.05■■■□□ 2.08
SPC25Q9HBM1 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC28.05■■■□□ 2.08
SPC25Q9HBM1 AC093536.1-201ENST00000569153 554 ntBASIC28.05■■■□□ 2.08
SPC25Q9HBM1 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC28.04■■■□□ 2.08
SPC25Q9HBM1 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC28.04■■■□□ 2.08
SPC25Q9HBM1 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC28.04■■■□□ 2.08
SPC25Q9HBM1 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC28.04■■■□□ 2.08
SPC25Q9HBM1 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC28.04■■■□□ 2.08
SPC25Q9HBM1 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC28.04■■■□□ 2.08
SPC25Q9HBM1 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC28.03■■■□□ 2.08
SPC25Q9HBM1 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC28.03■■■□□ 2.08
SPC25Q9HBM1 DUX4L9-201ENST00000449051 1259 ntBASIC28.03■■■□□ 2.08
SPC25Q9HBM1 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC28.03■■■□□ 2.08
SPC25Q9HBM1 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC28.03■■■□□ 2.08
SPC25Q9HBM1 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
SPC25Q9HBM1 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC28.02■■■□□ 2.08
SPC25Q9HBM1 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC28.02■■■□□ 2.08
SPC25Q9HBM1 AC074183.2-201ENST00000623112 922 ntBASIC28.02■■■□□ 2.08
SPC25Q9HBM1 AL035685.1-201ENST00000636663 812 ntBASIC28.02■■■□□ 2.08
SPC25Q9HBM1 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC28.01■■■□□ 2.08
SPC25Q9HBM1 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC28.01■■■□□ 2.07
SPC25Q9HBM1 MIR3960-201ENST00000583311 91 ntBASIC28.01■■■□□ 2.07
SPC25Q9HBM1 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.07
SPC25Q9HBM1 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC28■■■□□ 2.07
SPC25Q9HBM1 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC28■■■□□ 2.07
SPC25Q9HBM1 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC27.99■■■□□ 2.07
SPC25Q9HBM1 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC27.99■■■□□ 2.07
SPC25Q9HBM1 PFN2-211ENST00000489155 636 ntTSL 4 BASIC27.99■■■□□ 2.07
SPC25Q9HBM1 RAP2CP1-202ENST00000605179 643 ntBASIC27.99■■■□□ 2.07
SPC25Q9HBM1 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC27.99■■■□□ 2.07
SPC25Q9HBM1 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC27.99■■■□□ 2.07
SPC25Q9HBM1 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC27.99■■■□□ 2.07
SPC25Q9HBM1 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC27.98■■■□□ 2.07
SPC25Q9HBM1 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC27.98■■■□□ 2.07
SPC25Q9HBM1 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC27.98■■■□□ 2.07
SPC25Q9HBM1 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC27.97■■■□□ 2.07
SPC25Q9HBM1 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC27.97■■■□□ 2.07
SPC25Q9HBM1 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC27.97■■■□□ 2.07
SPC25Q9HBM1 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC27.97■■■□□ 2.07
SPC25Q9HBM1 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC27.97■■■□□ 2.07
SPC25Q9HBM1 AL451085.2-201ENST00000605085 799 ntBASIC27.97■■■□□ 2.07
SPC25Q9HBM1 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC27.97■■■□□ 2.07
SPC25Q9HBM1 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC27.97■■■□□ 2.07
SPC25Q9HBM1 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC27.97■■■□□ 2.07
SPC25Q9HBM1 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC27.97■■■□□ 2.07
SPC25Q9HBM1 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC27.96■■■□□ 2.07
SPC25Q9HBM1 AC139795.1-202ENST00000500444 432 ntBASIC27.96■■■□□ 2.07
SPC25Q9HBM1 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC27.96■■■□□ 2.07
SPC25Q9HBM1 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC27.96■■■□□ 2.07
SPC25Q9HBM1 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC27.95■■■□□ 2.07
SPC25Q9HBM1 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC27.95■■■□□ 2.07
SPC25Q9HBM1 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC27.95■■■□□ 2.06
SPC25Q9HBM1 HYI-210ENST00000486909 905 ntTSL 5 BASIC27.94■■■□□ 2.06
SPC25Q9HBM1 TRIR-205ENST00000592273 783 ntTSL 3 BASIC27.94■■■□□ 2.06
SPC25Q9HBM1 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC27.94■■■□□ 2.06
SPC25Q9HBM1 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC27.93■■■□□ 2.06
SPC25Q9HBM1 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC27.93■■■□□ 2.06
SPC25Q9HBM1 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC27.93■■■□□ 2.06
SPC25Q9HBM1 AC010980.1-201ENST00000587192 1142 ntBASIC27.93■■■□□ 2.06
SPC25Q9HBM1 MIR6765-201ENST00000614092 87 ntBASIC27.93■■■□□ 2.06
SPC25Q9HBM1 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC27.93■■■□□ 2.06
SPC25Q9HBM1 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC27.93■■■□□ 2.06
SPC25Q9HBM1 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC27.93■■■□□ 2.06
SPC25Q9HBM1 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC27.93■■■□□ 2.06
SPC25Q9HBM1 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC27.92■■■□□ 2.06
SPC25Q9HBM1 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC27.92■■■□□ 2.06
SPC25Q9HBM1 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC27.92■■■□□ 2.06
SPC25Q9HBM1 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC27.92■■■□□ 2.06
SPC25Q9HBM1 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC27.91■■■□□ 2.06
SPC25Q9HBM1 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC27.91■■■□□ 2.06
SPC25Q9HBM1 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC27.91■■■□□ 2.06
SPC25Q9HBM1 AC018755.3-202ENST00000596210 929 ntBASIC27.91■■■□□ 2.06
SPC25Q9HBM1 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC27.9■■■□□ 2.06
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms