Protein–RNA interactions for Protein: Q9H270

VPS11, Vacuolar protein sorting-associated protein 11 homolog, humanhuman

Predictions only

Length 941 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11Q9H270 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
VPS11Q9H270 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC24.96■■□□□ 1.59
VPS11Q9H270 MIR3665-201ENST00000578708 105 ntBASIC24.96■■□□□ 1.59
VPS11Q9H270 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
VPS11Q9H270 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC24.96■■□□□ 1.59
VPS11Q9H270 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC24.96■■□□□ 1.59
VPS11Q9H270 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC24.95■■□□□ 1.59
VPS11Q9H270 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
VPS11Q9H270 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC24.94■■□□□ 1.58
VPS11Q9H270 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC24.94■■□□□ 1.58
VPS11Q9H270 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
VPS11Q9H270 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
VPS11Q9H270 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC24.94■■□□□ 1.58
VPS11Q9H270 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC24.93■■□□□ 1.58
VPS11Q9H270 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
VPS11Q9H270 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
VPS11Q9H270 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
VPS11Q9H270 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
VPS11Q9H270 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
VPS11Q9H270 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC24.92■■□□□ 1.58
VPS11Q9H270 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
VPS11Q9H270 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC24.91■■□□□ 1.58
VPS11Q9H270 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC24.91■■□□□ 1.58
VPS11Q9H270 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
VPS11Q9H270 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC24.91■■□□□ 1.58
VPS11Q9H270 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
VPS11Q9H270 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
VPS11Q9H270 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC24.9■■□□□ 1.58
VPS11Q9H270 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC24.9■■□□□ 1.58
VPS11Q9H270 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
VPS11Q9H270 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC24.89■■□□□ 1.58
VPS11Q9H270 PKM-204ENST00000449901 2526 ntTSL 2 BASIC24.89■■□□□ 1.58
VPS11Q9H270 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC24.89■■□□□ 1.57
VPS11Q9H270 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC24.88■■□□□ 1.57
VPS11Q9H270 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC24.88■■□□□ 1.57
VPS11Q9H270 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC24.88■■□□□ 1.57
VPS11Q9H270 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC24.88■■□□□ 1.57
VPS11Q9H270 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
VPS11Q9H270 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
VPS11Q9H270 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC24.88■■□□□ 1.57
VPS11Q9H270 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC24.88■■□□□ 1.57
VPS11Q9H270 CIB2-204ENST00000557846 934 ntTSL 3 BASIC24.88■■□□□ 1.57
VPS11Q9H270 CALM3-209ENST00000597743 577 ntTSL 4 BASIC24.88■■□□□ 1.57
VPS11Q9H270 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
VPS11Q9H270 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
VPS11Q9H270 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC24.87■■□□□ 1.57
VPS11Q9H270 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
VPS11Q9H270 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
VPS11Q9H270 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
VPS11Q9H270 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
VPS11Q9H270 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC24.86■■□□□ 1.57
VPS11Q9H270 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
VPS11Q9H270 AP006261.1-201ENST00000584783 668 ntBASIC24.85■■□□□ 1.57
VPS11Q9H270 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC24.85■■□□□ 1.57
VPS11Q9H270 DUSP8P4-201ENST00000399538 1761 ntBASIC24.85■■□□□ 1.57
VPS11Q9H270 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC24.85■■□□□ 1.57
VPS11Q9H270 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
VPS11Q9H270 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
VPS11Q9H270 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
VPS11Q9H270 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC24.84■■□□□ 1.57
VPS11Q9H270 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC24.83■■□□□ 1.57
VPS11Q9H270 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC24.83■■□□□ 1.57
VPS11Q9H270 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC24.83■■□□□ 1.57
VPS11Q9H270 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
VPS11Q9H270 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
VPS11Q9H270 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
VPS11Q9H270 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC24.82■■□□□ 1.56
VPS11Q9H270 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
VPS11Q9H270 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC24.82■■□□□ 1.56
VPS11Q9H270 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC24.81■■□□□ 1.56
VPS11Q9H270 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC24.81■■□□□ 1.56
VPS11Q9H270 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
VPS11Q9H270 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
VPS11Q9H270 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
VPS11Q9H270 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC24.81■■□□□ 1.56
VPS11Q9H270 AC087741.3-201ENST00000624270 1347 ntBASIC24.8■■□□□ 1.56
VPS11Q9H270 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
VPS11Q9H270 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC24.79■■□□□ 1.56
VPS11Q9H270 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
VPS11Q9H270 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC24.79■■□□□ 1.56
VPS11Q9H270 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC24.79■■□□□ 1.56
VPS11Q9H270 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
VPS11Q9H270 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
VPS11Q9H270 AC092803.2-201ENST00000564287 1899 ntBASIC24.79■■□□□ 1.56
VPS11Q9H270 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
VPS11Q9H270 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC24.78■■□□□ 1.56
VPS11Q9H270 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC24.78■■□□□ 1.56
VPS11Q9H270 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC24.78■■□□□ 1.56
VPS11Q9H270 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC24.78■■□□□ 1.56
VPS11Q9H270 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC24.78■■□□□ 1.56
VPS11Q9H270 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
VPS11Q9H270 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
VPS11Q9H270 NRG1-221ENST00000614767 762 ntTSL 5 BASIC24.77■■□□□ 1.56
VPS11Q9H270 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
VPS11Q9H270 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC24.77■■□□□ 1.56
VPS11Q9H270 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC24.76■■□□□ 1.55
VPS11Q9H270 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC24.76■■□□□ 1.55
VPS11Q9H270 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
VPS11Q9H270 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
VPS11Q9H270 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
Retrieved 100 of 98,524 protein–RNA pairs in 67.1 ms