Protein–RNA interactions for Protein: Q9BYQ7

KRTAP4-1, Keratin-associated protein 4-1, humanhuman

Predictions only

Length 146 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-1Q9BYQ7 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
KRTAP4-1Q9BYQ7 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
KRTAP4-1Q9BYQ7 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
KRTAP4-1Q9BYQ7 AC025884.2-201ENST00000553429 711 ntBASIC13.2□□□□□ -0.3
KRTAP4-1Q9BYQ7 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
KRTAP4-1Q9BYQ7 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
KRTAP4-1Q9BYQ7 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
KRTAP4-1Q9BYQ7 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC13.2□□□□□ -0.3
KRTAP4-1Q9BYQ7 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
KRTAP4-1Q9BYQ7 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC13.19□□□□□ -0.3
KRTAP4-1Q9BYQ7 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
KRTAP4-1Q9BYQ7 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
KRTAP4-1Q9BYQ7 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
KRTAP4-1Q9BYQ7 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
KRTAP4-1Q9BYQ7 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC13.19□□□□□ -0.3
KRTAP4-1Q9BYQ7 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC13.19□□□□□ -0.3
KRTAP4-1Q9BYQ7 AC010980.1-201ENST00000587192 1142 ntBASIC13.19□□□□□ -0.3
KRTAP4-1Q9BYQ7 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
KRTAP4-1Q9BYQ7 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
KRTAP4-1Q9BYQ7 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
KRTAP4-1Q9BYQ7 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC13.19□□□□□ -0.3
KRTAP4-1Q9BYQ7 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC13.19□□□□□ -0.3
KRTAP4-1Q9BYQ7 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC13.19□□□□□ -0.3
KRTAP4-1Q9BYQ7 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
KRTAP4-1Q9BYQ7 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
KRTAP4-1Q9BYQ7 REST-210ENST00000638187 1334 ntTSL 5 BASIC13.18□□□□□ -0.3
KRTAP4-1Q9BYQ7 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
KRTAP4-1Q9BYQ7 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC13.18□□□□□ -0.3
KRTAP4-1Q9BYQ7 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
KRTAP4-1Q9BYQ7 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC13.18□□□□□ -0.3
KRTAP4-1Q9BYQ7 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC13.18□□□□□ -0.3
KRTAP4-1Q9BYQ7 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
KRTAP4-1Q9BYQ7 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC13.17□□□□□ -0.3
KRTAP4-1Q9BYQ7 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC13.17□□□□□ -0.3
KRTAP4-1Q9BYQ7 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
KRTAP4-1Q9BYQ7 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
KRTAP4-1Q9BYQ7 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
KRTAP4-1Q9BYQ7 RAP2CP1-202ENST00000605179 643 ntBASIC13.17□□□□□ -0.3
KRTAP4-1Q9BYQ7 PVT1_1.1-201ENST00000615125 194 ntBASIC13.17□□□□□ -0.3
KRTAP4-1Q9BYQ7 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC13.17□□□□□ -0.3
KRTAP4-1Q9BYQ7 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
KRTAP4-1Q9BYQ7 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
KRTAP4-1Q9BYQ7 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC13.16□□□□□ -0.3
KRTAP4-1Q9BYQ7 KRT8P33-201ENST00000508125 1423 ntBASIC13.16□□□□□ -0.3
KRTAP4-1Q9BYQ7 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC13.16□□□□□ -0.3
KRTAP4-1Q9BYQ7 AC093536.1-201ENST00000569153 554 ntBASIC13.16□□□□□ -0.3
KRTAP4-1Q9BYQ7 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC13.16□□□□□ -0.3
KRTAP4-1Q9BYQ7 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.3
KRTAP4-1Q9BYQ7 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC13.15□□□□□ -0.3
KRTAP4-1Q9BYQ7 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
KRTAP4-1Q9BYQ7 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
KRTAP4-1Q9BYQ7 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC13.15□□□□□ -0.3
KRTAP4-1Q9BYQ7 AL592295.1-201ENST00000400984 884 ntBASIC13.15□□□□□ -0.3
KRTAP4-1Q9BYQ7 AC103834.1-201ENST00000520383 144 ntBASIC13.15□□□□□ -0.3
KRTAP4-1Q9BYQ7 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC13.15□□□□□ -0.3
KRTAP4-1Q9BYQ7 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC13.15□□□□□ -0.3
KRTAP4-1Q9BYQ7 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
KRTAP4-1Q9BYQ7 AP004833.2-201ENST00000532228 1454 ntBASIC13.15□□□□□ -0.3
KRTAP4-1Q9BYQ7 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
KRTAP4-1Q9BYQ7 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
KRTAP4-1Q9BYQ7 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC13.14□□□□□ -0.31
KRTAP4-1Q9BYQ7 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
KRTAP4-1Q9BYQ7 BEX3-202ENST00000372634 753 ntTSL 2 BASIC13.14□□□□□ -0.31
KRTAP4-1Q9BYQ7 RP9P-202ENST00000450133 1212 ntBASIC13.14□□□□□ -0.31
KRTAP4-1Q9BYQ7 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
KRTAP4-1Q9BYQ7 TRIR-205ENST00000592273 783 ntTSL 3 BASIC13.14□□□□□ -0.31
KRTAP4-1Q9BYQ7 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC13.14□□□□□ -0.31
KRTAP4-1Q9BYQ7 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
KRTAP4-1Q9BYQ7 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
KRTAP4-1Q9BYQ7 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
KRTAP4-1Q9BYQ7 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
KRTAP4-1Q9BYQ7 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC13.13□□□□□ -0.31
KRTAP4-1Q9BYQ7 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
KRTAP4-1Q9BYQ7 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
KRTAP4-1Q9BYQ7 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
KRTAP4-1Q9BYQ7 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
KRTAP4-1Q9BYQ7 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
KRTAP4-1Q9BYQ7 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
KRTAP4-1Q9BYQ7 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC13.12□□□□□ -0.31
KRTAP4-1Q9BYQ7 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC13.12□□□□□ -0.31
KRTAP4-1Q9BYQ7 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
KRTAP4-1Q9BYQ7 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
KRTAP4-1Q9BYQ7 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
KRTAP4-1Q9BYQ7 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
KRTAP4-1Q9BYQ7 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC13.12□□□□□ -0.31
KRTAP4-1Q9BYQ7 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
KRTAP4-1Q9BYQ7 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
KRTAP4-1Q9BYQ7 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
KRTAP4-1Q9BYQ7 MTURN-203ENST00000409688 843 ntTSL 2 BASIC13.11□□□□□ -0.31
KRTAP4-1Q9BYQ7 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC13.11□□□□□ -0.31
KRTAP4-1Q9BYQ7 AC009299.2-201ENST00000482477 511 ntBASIC13.11□□□□□ -0.31
KRTAP4-1Q9BYQ7 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC13.11□□□□□ -0.31
KRTAP4-1Q9BYQ7 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
KRTAP4-1Q9BYQ7 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
KRTAP4-1Q9BYQ7 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
KRTAP4-1Q9BYQ7 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
KRTAP4-1Q9BYQ7 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
KRTAP4-1Q9BYQ7 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
KRTAP4-1Q9BYQ7 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC13.1□□□□□ -0.31
KRTAP4-1Q9BYQ7 BHLHE23-202ENST00000612929 1109 ntBASIC13.1□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms