Protein–RNA interactions for Protein: Q96F44

TRIM11, E3 ubiquitin-protein ligase TRIM11, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11Q96F44 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC26.36■■□□□ 1.81
TRIM11Q96F44 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC26.36■■□□□ 1.81
TRIM11Q96F44 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
TRIM11Q96F44 MLEC-202ENST00000412616 841 ntTSL 3 BASIC26.35■■□□□ 1.81
TRIM11Q96F44 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC26.35■■□□□ 1.81
TRIM11Q96F44 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
TRIM11Q96F44 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
TRIM11Q96F44 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
TRIM11Q96F44 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC26.33■■□□□ 1.81
TRIM11Q96F44 DUX4L13-201ENST00000554103 1267 ntBASIC26.33■■□□□ 1.81
TRIM11Q96F44 DUX4L15-201ENST00000611059 1267 ntBASIC26.33■■□□□ 1.81
TRIM11Q96F44 DUX4L23-201ENST00000615195 1269 ntBASIC26.33■■□□□ 1.81
TRIM11Q96F44 DUX4L24-201ENST00000617576 1269 ntBASIC26.33■■□□□ 1.81
TRIM11Q96F44 DUX4L22-201ENST00000618238 1269 ntBASIC26.33■■□□□ 1.81
TRIM11Q96F44 DUX4L20-201ENST00000619712 1269 ntBASIC26.33■■□□□ 1.81
TRIM11Q96F44 DUX4L21-201ENST00000622058 1269 ntBASIC26.33■■□□□ 1.81
TRIM11Q96F44 DUX4L10-201ENST00000622460 1267 ntBASIC26.33■■□□□ 1.81
TRIM11Q96F44 DUX4L25-201ENST00000624915 1269 ntBASIC26.33■■□□□ 1.81
TRIM11Q96F44 AL449106.1-201ENST00000608517 1980 ntBASIC26.33■■□□□ 1.8
TRIM11Q96F44 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
TRIM11Q96F44 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
TRIM11Q96F44 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC26.31■■□□□ 1.8
TRIM11Q96F44 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
TRIM11Q96F44 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC26.31■■□□□ 1.8
TRIM11Q96F44 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
TRIM11Q96F44 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC26.31■■□□□ 1.8
TRIM11Q96F44 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC26.3■■□□□ 1.8
TRIM11Q96F44 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
TRIM11Q96F44 WHAMMP3-201ENST00000611636 1609 ntBASIC26.3■■□□□ 1.8
TRIM11Q96F44 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC26.3■■□□□ 1.8
TRIM11Q96F44 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC26.3■■□□□ 1.8
TRIM11Q96F44 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
TRIM11Q96F44 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC26.29■■□□□ 1.8
TRIM11Q96F44 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC26.28■■□□□ 1.8
TRIM11Q96F44 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC26.28■■□□□ 1.8
TRIM11Q96F44 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC26.28■■□□□ 1.8
TRIM11Q96F44 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC26.27■■□□□ 1.8
TRIM11Q96F44 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC26.27■■□□□ 1.8
TRIM11Q96F44 DUX4L11-201ENST00000611504 1267 ntBASIC26.27■■□□□ 1.8
TRIM11Q96F44 DUX4L12-201ENST00000614593 1267 ntBASIC26.27■■□□□ 1.8
TRIM11Q96F44 DUX4L14-201ENST00000621227 1267 ntBASIC26.27■■□□□ 1.8
TRIM11Q96F44 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
TRIM11Q96F44 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
TRIM11Q96F44 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
TRIM11Q96F44 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
TRIM11Q96F44 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
TRIM11Q96F44 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC26.26■■□□□ 1.79
TRIM11Q96F44 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
TRIM11Q96F44 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC26.26■■□□□ 1.79
TRIM11Q96F44 AP004609.3-201ENST00000610705 1884 ntBASIC26.25■■□□□ 1.79
TRIM11Q96F44 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC26.25■■□□□ 1.79
TRIM11Q96F44 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
TRIM11Q96F44 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
TRIM11Q96F44 AC008813.1-201ENST00000536597 885 ntBASIC26.25■■□□□ 1.79
TRIM11Q96F44 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC26.25■■□□□ 1.79
TRIM11Q96F44 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC26.25■■□□□ 1.79
TRIM11Q96F44 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC26.25■■□□□ 1.79
TRIM11Q96F44 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
TRIM11Q96F44 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
TRIM11Q96F44 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
TRIM11Q96F44 CHST11-202ENST00000546689 756 ntTSL 2 BASIC26.24■■□□□ 1.79
TRIM11Q96F44 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC26.23■■□□□ 1.79
TRIM11Q96F44 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
TRIM11Q96F44 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC26.23■■□□□ 1.79
TRIM11Q96F44 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC26.23■■□□□ 1.79
TRIM11Q96F44 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC26.23■■□□□ 1.79
TRIM11Q96F44 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
TRIM11Q96F44 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC26.22■■□□□ 1.79
TRIM11Q96F44 ZNRF2P2-203ENST00000454624 420 ntBASIC26.22■■□□□ 1.79
TRIM11Q96F44 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC26.22■■□□□ 1.79
TRIM11Q96F44 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC26.21■■□□□ 1.79
TRIM11Q96F44 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC26.21■■□□□ 1.79
TRIM11Q96F44 AC142472.1-201ENST00000612013 1741 ntBASIC26.21■■□□□ 1.79
TRIM11Q96F44 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC26.21■■□□□ 1.79
TRIM11Q96F44 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC26.21■■□□□ 1.79
TRIM11Q96F44 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC26.2■■□□□ 1.78
TRIM11Q96F44 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
TRIM11Q96F44 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
TRIM11Q96F44 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
TRIM11Q96F44 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC26.19■■□□□ 1.78
TRIM11Q96F44 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC26.18■■□□□ 1.78
TRIM11Q96F44 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
TRIM11Q96F44 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC26.18■■□□□ 1.78
TRIM11Q96F44 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
TRIM11Q96F44 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
TRIM11Q96F44 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC26.17■■□□□ 1.78
TRIM11Q96F44 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC26.17■■□□□ 1.78
TRIM11Q96F44 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC26.17■■□□□ 1.78
TRIM11Q96F44 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC26.17■■□□□ 1.78
TRIM11Q96F44 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC26.17■■□□□ 1.78
TRIM11Q96F44 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC26.16■■□□□ 1.78
TRIM11Q96F44 SHF-207ENST00000560540 2062 ntTSL 5 BASIC26.16■■□□□ 1.78
TRIM11Q96F44 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC26.16■■□□□ 1.78
TRIM11Q96F44 AGPS-202ENST00000409888 815 ntTSL 4 BASIC26.16■■□□□ 1.78
TRIM11Q96F44 AC148477.6-201ENST00000623746 465 ntBASIC26.16■■□□□ 1.78
TRIM11Q96F44 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
TRIM11Q96F44 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
TRIM11Q96F44 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
TRIM11Q96F44 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC26.15■■□□□ 1.78
TRIM11Q96F44 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC26.15■■□□□ 1.78
Retrieved 100 of 98,524 protein–RNA pairs in 10.2 ms