Protein–RNA interactions for Protein: Q96D70

R3HDM4, R3H domain-containing protein 4, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM4Q96D70 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
R3HDM4Q96D70 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
R3HDM4Q96D70 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
R3HDM4Q96D70 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
R3HDM4Q96D70 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC20.46■□□□□ 0.87
R3HDM4Q96D70 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
R3HDM4Q96D70 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
R3HDM4Q96D70 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC20.46■□□□□ 0.87
R3HDM4Q96D70 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
R3HDM4Q96D70 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
R3HDM4Q96D70 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
R3HDM4Q96D70 PKM-203ENST00000389093 2279 ntTSL 5 BASIC20.46■□□□□ 0.87
R3HDM4Q96D70 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC20.46■□□□□ 0.87
R3HDM4Q96D70 WHAMMP2-203ENST00000563942 1603 ntBASIC20.45■□□□□ 0.87
R3HDM4Q96D70 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
R3HDM4Q96D70 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
R3HDM4Q96D70 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC20.45■□□□□ 0.86
R3HDM4Q96D70 AC018358.1-201ENST00000631079 1402 ntBASIC20.44■□□□□ 0.86
R3HDM4Q96D70 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
R3HDM4Q96D70 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
R3HDM4Q96D70 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC20.44■□□□□ 0.86
R3HDM4Q96D70 SHF-207ENST00000560540 2062 ntTSL 5 BASIC20.44■□□□□ 0.86
R3HDM4Q96D70 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC20.44■□□□□ 0.86
R3HDM4Q96D70 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
R3HDM4Q96D70 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
R3HDM4Q96D70 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
R3HDM4Q96D70 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
R3HDM4Q96D70 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
R3HDM4Q96D70 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
R3HDM4Q96D70 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC20.42■□□□□ 0.86
R3HDM4Q96D70 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
R3HDM4Q96D70 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
R3HDM4Q96D70 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
R3HDM4Q96D70 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC20.41■□□□□ 0.86
R3HDM4Q96D70 CR559946.2-201ENST00000623684 991 ntBASIC20.41■□□□□ 0.86
R3HDM4Q96D70 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
R3HDM4Q96D70 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
R3HDM4Q96D70 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
R3HDM4Q96D70 SNAI3-AS1-204ENST00000567997 2048 ntBASIC20.41■□□□□ 0.86
R3HDM4Q96D70 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
R3HDM4Q96D70 LINC00273-201ENST00000539813 1452 ntBASIC20.4■□□□□ 0.86
R3HDM4Q96D70 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.86
R3HDM4Q96D70 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
R3HDM4Q96D70 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
R3HDM4Q96D70 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
R3HDM4Q96D70 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
R3HDM4Q96D70 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
R3HDM4Q96D70 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC20.38■□□□□ 0.85
R3HDM4Q96D70 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
R3HDM4Q96D70 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC20.38■□□□□ 0.85
R3HDM4Q96D70 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC20.37■□□□□ 0.85
R3HDM4Q96D70 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
R3HDM4Q96D70 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
R3HDM4Q96D70 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
R3HDM4Q96D70 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
R3HDM4Q96D70 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
R3HDM4Q96D70 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
R3HDM4Q96D70 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
R3HDM4Q96D70 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
R3HDM4Q96D70 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
R3HDM4Q96D70 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
R3HDM4Q96D70 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
R3HDM4Q96D70 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC20.35■□□□□ 0.85
R3HDM4Q96D70 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
R3HDM4Q96D70 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC20.35■□□□□ 0.85
R3HDM4Q96D70 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
R3HDM4Q96D70 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
R3HDM4Q96D70 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
R3HDM4Q96D70 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
R3HDM4Q96D70 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
R3HDM4Q96D70 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC20.34■□□□□ 0.85
R3HDM4Q96D70 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC20.34■□□□□ 0.85
R3HDM4Q96D70 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC20.34■□□□□ 0.85
R3HDM4Q96D70 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC20.33■□□□□ 0.85
R3HDM4Q96D70 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
R3HDM4Q96D70 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
R3HDM4Q96D70 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
R3HDM4Q96D70 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
R3HDM4Q96D70 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC20.33■□□□□ 0.85
R3HDM4Q96D70 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
R3HDM4Q96D70 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC20.33■□□□□ 0.84
R3HDM4Q96D70 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC20.33■□□□□ 0.84
R3HDM4Q96D70 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
R3HDM4Q96D70 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC20.33■□□□□ 0.84
R3HDM4Q96D70 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
R3HDM4Q96D70 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC20.32■□□□□ 0.84
R3HDM4Q96D70 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
R3HDM4Q96D70 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
R3HDM4Q96D70 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
R3HDM4Q96D70 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC20.31■□□□□ 0.84
R3HDM4Q96D70 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
R3HDM4Q96D70 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
R3HDM4Q96D70 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
R3HDM4Q96D70 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
R3HDM4Q96D70 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
R3HDM4Q96D70 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
R3HDM4Q96D70 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
R3HDM4Q96D70 HSD17B1P1-201ENST00000590052 955 ntBASIC20.3■□□□□ 0.84
R3HDM4Q96D70 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC20.3■□□□□ 0.84
R3HDM4Q96D70 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 79.4 ms