Protein–RNA interactions for Protein: Q8NEP3

DNAAF1, Dynein assembly factor 1, axonemal, humanhuman

Predictions only

Length 725 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNAAF1Q8NEP3 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
DNAAF1Q8NEP3 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC21.75■■□□□ 1.07
DNAAF1Q8NEP3 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC21.75■■□□□ 1.07
DNAAF1Q8NEP3 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC21.75■■□□□ 1.07
DNAAF1Q8NEP3 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
DNAAF1Q8NEP3 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC21.74■■□□□ 1.07
DNAAF1Q8NEP3 WHAMMP2-203ENST00000563942 1603 ntBASIC21.74■■□□□ 1.07
DNAAF1Q8NEP3 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
DNAAF1Q8NEP3 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
DNAAF1Q8NEP3 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
DNAAF1Q8NEP3 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
DNAAF1Q8NEP3 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
DNAAF1Q8NEP3 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC21.73■■□□□ 1.07
DNAAF1Q8NEP3 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC21.73■■□□□ 1.07
DNAAF1Q8NEP3 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
DNAAF1Q8NEP3 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC21.73■■□□□ 1.07
DNAAF1Q8NEP3 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
DNAAF1Q8NEP3 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
DNAAF1Q8NEP3 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
DNAAF1Q8NEP3 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC21.72■■□□□ 1.07
DNAAF1Q8NEP3 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC21.72■■□□□ 1.07
DNAAF1Q8NEP3 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
DNAAF1Q8NEP3 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC21.71■■□□□ 1.07
DNAAF1Q8NEP3 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
DNAAF1Q8NEP3 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
DNAAF1Q8NEP3 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
DNAAF1Q8NEP3 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC21.7■■□□□ 1.07
DNAAF1Q8NEP3 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
DNAAF1Q8NEP3 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC21.7■■□□□ 1.06
DNAAF1Q8NEP3 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
DNAAF1Q8NEP3 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
DNAAF1Q8NEP3 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
DNAAF1Q8NEP3 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
DNAAF1Q8NEP3 AC145676.1-201ENST00000514988 2004 ntBASIC21.69■■□□□ 1.06
DNAAF1Q8NEP3 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
DNAAF1Q8NEP3 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
DNAAF1Q8NEP3 AC020928.2-201ENST00000588717 2197 ntBASIC21.69■■□□□ 1.06
DNAAF1Q8NEP3 AC087741.3-201ENST00000624270 1347 ntBASIC21.69■■□□□ 1.06
DNAAF1Q8NEP3 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC21.68■■□□□ 1.06
DNAAF1Q8NEP3 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
DNAAF1Q8NEP3 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
DNAAF1Q8NEP3 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
DNAAF1Q8NEP3 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC21.68■■□□□ 1.06
DNAAF1Q8NEP3 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
DNAAF1Q8NEP3 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
DNAAF1Q8NEP3 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC21.67■■□□□ 1.06
DNAAF1Q8NEP3 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
DNAAF1Q8NEP3 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
DNAAF1Q8NEP3 CIB2-204ENST00000557846 934 ntTSL 3 BASIC21.66■■□□□ 1.06
DNAAF1Q8NEP3 CALM3-209ENST00000597743 577 ntTSL 4 BASIC21.66■■□□□ 1.06
DNAAF1Q8NEP3 NRG1-221ENST00000614767 762 ntTSL 5 BASIC21.66■■□□□ 1.06
DNAAF1Q8NEP3 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC21.66■■□□□ 1.06
DNAAF1Q8NEP3 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC21.66■■□□□ 1.06
DNAAF1Q8NEP3 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC21.65■■□□□ 1.06
DNAAF1Q8NEP3 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC21.65■■□□□ 1.06
DNAAF1Q8NEP3 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
DNAAF1Q8NEP3 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
DNAAF1Q8NEP3 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
DNAAF1Q8NEP3 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC21.64■■□□□ 1.06
DNAAF1Q8NEP3 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC21.64■■□□□ 1.06
DNAAF1Q8NEP3 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
DNAAF1Q8NEP3 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
DNAAF1Q8NEP3 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
DNAAF1Q8NEP3 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
DNAAF1Q8NEP3 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC21.63■■□□□ 1.05
DNAAF1Q8NEP3 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
DNAAF1Q8NEP3 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC21.63■■□□□ 1.05
DNAAF1Q8NEP3 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
DNAAF1Q8NEP3 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
DNAAF1Q8NEP3 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
DNAAF1Q8NEP3 AL162393.1-201ENST00000437852 946 ntBASIC21.63■■□□□ 1.05
DNAAF1Q8NEP3 AC044849.2-201ENST00000606596 710 ntBASIC21.63■■□□□ 1.05
DNAAF1Q8NEP3 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
DNAAF1Q8NEP3 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
DNAAF1Q8NEP3 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
DNAAF1Q8NEP3 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
DNAAF1Q8NEP3 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC21.62■■□□□ 1.05
DNAAF1Q8NEP3 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC21.61■■□□□ 1.05
DNAAF1Q8NEP3 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
DNAAF1Q8NEP3 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC21.61■■□□□ 1.05
DNAAF1Q8NEP3 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
DNAAF1Q8NEP3 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
DNAAF1Q8NEP3 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
DNAAF1Q8NEP3 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
DNAAF1Q8NEP3 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
DNAAF1Q8NEP3 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
DNAAF1Q8NEP3 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC21.6■■□□□ 1.05
DNAAF1Q8NEP3 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
DNAAF1Q8NEP3 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
DNAAF1Q8NEP3 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
DNAAF1Q8NEP3 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
DNAAF1Q8NEP3 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC21.59■■□□□ 1.05
DNAAF1Q8NEP3 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC21.59■■□□□ 1.05
DNAAF1Q8NEP3 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
DNAAF1Q8NEP3 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
DNAAF1Q8NEP3 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
DNAAF1Q8NEP3 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC21.58■■□□□ 1.04
DNAAF1Q8NEP3 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
DNAAF1Q8NEP3 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
DNAAF1Q8NEP3 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC21.57■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 15 ms