Protein–RNA interactions for Protein: Q8N8F7

LSMEM1, Leucine-rich single-pass membrane protein 1, humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSMEM1Q8N8F7 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC22.79■■□□□ 1.24
LSMEM1Q8N8F7 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC22.79■■□□□ 1.24
LSMEM1Q8N8F7 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC22.79■■□□□ 1.24
LSMEM1Q8N8F7 MLEC-202ENST00000412616 841 ntTSL 3 BASIC22.79■■□□□ 1.24
LSMEM1Q8N8F7 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
LSMEM1Q8N8F7 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC22.78■■□□□ 1.24
LSMEM1Q8N8F7 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
LSMEM1Q8N8F7 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
LSMEM1Q8N8F7 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
LSMEM1Q8N8F7 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC22.77■■□□□ 1.24
LSMEM1Q8N8F7 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
LSMEM1Q8N8F7 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
LSMEM1Q8N8F7 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC22.77■■□□□ 1.24
LSMEM1Q8N8F7 CREM-210ENST00000374721 2020 ntTSL 5 BASIC22.77■■□□□ 1.24
LSMEM1Q8N8F7 DUX4L13-201ENST00000554103 1267 ntBASIC22.76■■□□□ 1.23
LSMEM1Q8N8F7 DUX4L15-201ENST00000611059 1267 ntBASIC22.76■■□□□ 1.23
LSMEM1Q8N8F7 DUX4L23-201ENST00000615195 1269 ntBASIC22.76■■□□□ 1.23
LSMEM1Q8N8F7 DUX4L24-201ENST00000617576 1269 ntBASIC22.76■■□□□ 1.23
LSMEM1Q8N8F7 DUX4L22-201ENST00000618238 1269 ntBASIC22.76■■□□□ 1.23
LSMEM1Q8N8F7 DUX4L20-201ENST00000619712 1269 ntBASIC22.76■■□□□ 1.23
LSMEM1Q8N8F7 DUX4L21-201ENST00000622058 1269 ntBASIC22.76■■□□□ 1.23
LSMEM1Q8N8F7 DUX4L10-201ENST00000622460 1267 ntBASIC22.76■■□□□ 1.23
LSMEM1Q8N8F7 DUX4L25-201ENST00000624915 1269 ntBASIC22.76■■□□□ 1.23
LSMEM1Q8N8F7 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC22.76■■□□□ 1.23
LSMEM1Q8N8F7 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
LSMEM1Q8N8F7 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
LSMEM1Q8N8F7 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC22.75■■□□□ 1.23
LSMEM1Q8N8F7 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC22.74■■□□□ 1.23
LSMEM1Q8N8F7 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
LSMEM1Q8N8F7 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
LSMEM1Q8N8F7 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC22.73■■□□□ 1.23
LSMEM1Q8N8F7 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
LSMEM1Q8N8F7 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC22.73■■□□□ 1.23
LSMEM1Q8N8F7 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
LSMEM1Q8N8F7 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
LSMEM1Q8N8F7 AL449106.1-201ENST00000608517 1980 ntBASIC22.72■■□□□ 1.23
LSMEM1Q8N8F7 DUX4L11-201ENST00000611504 1267 ntBASIC22.72■■□□□ 1.23
LSMEM1Q8N8F7 DUX4L12-201ENST00000614593 1267 ntBASIC22.72■■□□□ 1.23
LSMEM1Q8N8F7 DUX4L14-201ENST00000621227 1267 ntBASIC22.72■■□□□ 1.23
LSMEM1Q8N8F7 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
LSMEM1Q8N8F7 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC22.72■■□□□ 1.23
LSMEM1Q8N8F7 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
LSMEM1Q8N8F7 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC22.71■■□□□ 1.23
LSMEM1Q8N8F7 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
LSMEM1Q8N8F7 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
LSMEM1Q8N8F7 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
LSMEM1Q8N8F7 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC22.71■■□□□ 1.23
LSMEM1Q8N8F7 SNAI3-AS1-204ENST00000567997 2048 ntBASIC22.7■■□□□ 1.23
LSMEM1Q8N8F7 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC22.7■■□□□ 1.22
LSMEM1Q8N8F7 ZNRF2P2-203ENST00000454624 420 ntBASIC22.7■■□□□ 1.22
LSMEM1Q8N8F7 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
LSMEM1Q8N8F7 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC22.7■■□□□ 1.22
LSMEM1Q8N8F7 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
LSMEM1Q8N8F7 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
LSMEM1Q8N8F7 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
LSMEM1Q8N8F7 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC22.69■■□□□ 1.22
LSMEM1Q8N8F7 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
LSMEM1Q8N8F7 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC22.69■■□□□ 1.22
LSMEM1Q8N8F7 WHAMMP3-201ENST00000611636 1609 ntBASIC22.68■■□□□ 1.22
LSMEM1Q8N8F7 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
LSMEM1Q8N8F7 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
LSMEM1Q8N8F7 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
LSMEM1Q8N8F7 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC22.68■■□□□ 1.22
LSMEM1Q8N8F7 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC22.68■■□□□ 1.22
LSMEM1Q8N8F7 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC22.68■■□□□ 1.22
LSMEM1Q8N8F7 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
LSMEM1Q8N8F7 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC22.68■■□□□ 1.22
LSMEM1Q8N8F7 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC22.67■■□□□ 1.22
LSMEM1Q8N8F7 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC22.67■■□□□ 1.22
LSMEM1Q8N8F7 AC008813.1-201ENST00000536597 885 ntBASIC22.67■■□□□ 1.22
LSMEM1Q8N8F7 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC22.67■■□□□ 1.22
LSMEM1Q8N8F7 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC22.66■■□□□ 1.22
LSMEM1Q8N8F7 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC22.66■■□□□ 1.22
LSMEM1Q8N8F7 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
LSMEM1Q8N8F7 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC22.66■■□□□ 1.22
LSMEM1Q8N8F7 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC22.65■■□□□ 1.22
LSMEM1Q8N8F7 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
LSMEM1Q8N8F7 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
LSMEM1Q8N8F7 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC22.65■■□□□ 1.22
LSMEM1Q8N8F7 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC22.64■■□□□ 1.21
LSMEM1Q8N8F7 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
LSMEM1Q8N8F7 CHST11-202ENST00000546689 756 ntTSL 2 BASIC22.64■■□□□ 1.21
LSMEM1Q8N8F7 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC22.64■■□□□ 1.21
LSMEM1Q8N8F7 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC22.63■■□□□ 1.21
LSMEM1Q8N8F7 AP004609.3-201ENST00000610705 1884 ntBASIC22.63■■□□□ 1.21
LSMEM1Q8N8F7 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC22.63■■□□□ 1.21
LSMEM1Q8N8F7 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC22.63■■□□□ 1.21
LSMEM1Q8N8F7 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC22.63■■□□□ 1.21
LSMEM1Q8N8F7 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
LSMEM1Q8N8F7 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
LSMEM1Q8N8F7 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
LSMEM1Q8N8F7 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC22.62■■□□□ 1.21
LSMEM1Q8N8F7 AGPS-202ENST00000409888 815 ntTSL 4 BASIC22.62■■□□□ 1.21
LSMEM1Q8N8F7 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
LSMEM1Q8N8F7 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC22.62■■□□□ 1.21
LSMEM1Q8N8F7 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
LSMEM1Q8N8F7 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC22.62■■□□□ 1.21
LSMEM1Q8N8F7 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC22.61■■□□□ 1.21
LSMEM1Q8N8F7 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
LSMEM1Q8N8F7 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC22.61■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 85.4 ms