Protein–RNA interactions for Protein: Q7Z7F7

MRPL55, 39S ribosomal protein L55, mitochondrial, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55Q7Z7F7 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC15.89■□□□□ 0.13
MRPL55Q7Z7F7 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC15.89■□□□□ 0.13
MRPL55Q7Z7F7 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
MRPL55Q7Z7F7 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
MRPL55Q7Z7F7 DUX4L29-201ENST00000425409 679 ntBASIC15.88■□□□□ 0.13
MRPL55Q7Z7F7 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC15.88■□□□□ 0.13
MRPL55Q7Z7F7 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
MRPL55Q7Z7F7 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC15.88■□□□□ 0.13
MRPL55Q7Z7F7 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC15.88■□□□□ 0.13
MRPL55Q7Z7F7 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC15.87■□□□□ 0.13
MRPL55Q7Z7F7 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC15.87■□□□□ 0.13
MRPL55Q7Z7F7 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC15.87■□□□□ 0.13
MRPL55Q7Z7F7 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
MRPL55Q7Z7F7 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC15.87■□□□□ 0.13
MRPL55Q7Z7F7 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
MRPL55Q7Z7F7 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
MRPL55Q7Z7F7 PKM-203ENST00000389093 2279 ntTSL 5 BASIC15.86■□□□□ 0.13
MRPL55Q7Z7F7 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
MRPL55Q7Z7F7 AC110285.7-201ENST00000624417 1536 ntBASIC15.86■□□□□ 0.13
MRPL55Q7Z7F7 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
MRPL55Q7Z7F7 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
MRPL55Q7Z7F7 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
MRPL55Q7Z7F7 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
MRPL55Q7Z7F7 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC15.85■□□□□ 0.13
MRPL55Q7Z7F7 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
MRPL55Q7Z7F7 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
MRPL55Q7Z7F7 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
MRPL55Q7Z7F7 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC15.85■□□□□ 0.13
MRPL55Q7Z7F7 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
MRPL55Q7Z7F7 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
MRPL55Q7Z7F7 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC15.84■□□□□ 0.13
MRPL55Q7Z7F7 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
MRPL55Q7Z7F7 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
MRPL55Q7Z7F7 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC15.84■□□□□ 0.13
MRPL55Q7Z7F7 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC15.84■□□□□ 0.13
MRPL55Q7Z7F7 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
MRPL55Q7Z7F7 AC021231.2-201ENST00000594613 730 ntBASIC15.84■□□□□ 0.13
MRPL55Q7Z7F7 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
MRPL55Q7Z7F7 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC15.84■□□□□ 0.13
MRPL55Q7Z7F7 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
MRPL55Q7Z7F7 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
MRPL55Q7Z7F7 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
MRPL55Q7Z7F7 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.13
MRPL55Q7Z7F7 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.12
MRPL55Q7Z7F7 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
MRPL55Q7Z7F7 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC15.83■□□□□ 0.12
MRPL55Q7Z7F7 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC15.83■□□□□ 0.12
MRPL55Q7Z7F7 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
MRPL55Q7Z7F7 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
MRPL55Q7Z7F7 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
MRPL55Q7Z7F7 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC15.82■□□□□ 0.12
MRPL55Q7Z7F7 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
MRPL55Q7Z7F7 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
MRPL55Q7Z7F7 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
MRPL55Q7Z7F7 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
MRPL55Q7Z7F7 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
MRPL55Q7Z7F7 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC15.81■□□□□ 0.12
MRPL55Q7Z7F7 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
MRPL55Q7Z7F7 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
MRPL55Q7Z7F7 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
MRPL55Q7Z7F7 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
MRPL55Q7Z7F7 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
MRPL55Q7Z7F7 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
MRPL55Q7Z7F7 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
MRPL55Q7Z7F7 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
MRPL55Q7Z7F7 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
MRPL55Q7Z7F7 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC15.79■□□□□ 0.12
MRPL55Q7Z7F7 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC15.79■□□□□ 0.12
MRPL55Q7Z7F7 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC15.78■□□□□ 0.12
MRPL55Q7Z7F7 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
MRPL55Q7Z7F7 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
MRPL55Q7Z7F7 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
MRPL55Q7Z7F7 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC15.78■□□□□ 0.12
MRPL55Q7Z7F7 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC15.78■□□□□ 0.12
MRPL55Q7Z7F7 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC15.78■□□□□ 0.12
MRPL55Q7Z7F7 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC15.78■□□□□ 0.12
MRPL55Q7Z7F7 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC15.78■□□□□ 0.12
MRPL55Q7Z7F7 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC15.78■□□□□ 0.12
MRPL55Q7Z7F7 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC15.78■□□□□ 0.12
MRPL55Q7Z7F7 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
MRPL55Q7Z7F7 PEX7-203ENST00000541292 945 ntTSL 5 BASIC15.77■□□□□ 0.12
MRPL55Q7Z7F7 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
MRPL55Q7Z7F7 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.11
MRPL55Q7Z7F7 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
MRPL55Q7Z7F7 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC15.76■□□□□ 0.11
MRPL55Q7Z7F7 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
MRPL55Q7Z7F7 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
MRPL55Q7Z7F7 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
MRPL55Q7Z7F7 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC15.76■□□□□ 0.11
MRPL55Q7Z7F7 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
MRPL55Q7Z7F7 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
MRPL55Q7Z7F7 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
MRPL55Q7Z7F7 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
MRPL55Q7Z7F7 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
MRPL55Q7Z7F7 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC15.75■□□□□ 0.11
MRPL55Q7Z7F7 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
MRPL55Q7Z7F7 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
MRPL55Q7Z7F7 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC15.75■□□□□ 0.11
MRPL55Q7Z7F7 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
MRPL55Q7Z7F7 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms