Protein–RNA interactions for Protein: Q5T6M2

LINC00242, Putative uncharacterized protein encoded by LINC00242, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00242Q5T6M2 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
LINC00242Q5T6M2 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC17■□□□□ 0.31
LINC00242Q5T6M2 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC17■□□□□ 0.31
LINC00242Q5T6M2 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
LINC00242Q5T6M2 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
LINC00242Q5T6M2 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
LINC00242Q5T6M2 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
LINC00242Q5T6M2 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC17■□□□□ 0.31
LINC00242Q5T6M2 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC17■□□□□ 0.31
LINC00242Q5T6M2 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC17■□□□□ 0.31
LINC00242Q5T6M2 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC17■□□□□ 0.31
LINC00242Q5T6M2 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC17■□□□□ 0.31
LINC00242Q5T6M2 AC097358.2-201ENST00000607541 1159 ntBASIC17■□□□□ 0.31
LINC00242Q5T6M2 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
LINC00242Q5T6M2 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
LINC00242Q5T6M2 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
LINC00242Q5T6M2 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
LINC00242Q5T6M2 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
LINC00242Q5T6M2 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
LINC00242Q5T6M2 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
LINC00242Q5T6M2 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
LINC00242Q5T6M2 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
LINC00242Q5T6M2 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
LINC00242Q5T6M2 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
LINC00242Q5T6M2 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
LINC00242Q5T6M2 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
LINC00242Q5T6M2 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC16.98■□□□□ 0.31
LINC00242Q5T6M2 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC16.98■□□□□ 0.31
LINC00242Q5T6M2 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC16.98■□□□□ 0.31
LINC00242Q5T6M2 CHML-205ENST00000638160 705 ntTSL 3 BASIC16.98■□□□□ 0.31
LINC00242Q5T6M2 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
LINC00242Q5T6M2 AP004609.3-201ENST00000610705 1884 ntBASIC16.98■□□□□ 0.31
LINC00242Q5T6M2 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
LINC00242Q5T6M2 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC16.97■□□□□ 0.31
LINC00242Q5T6M2 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC16.97■□□□□ 0.31
LINC00242Q5T6M2 EI24-212ENST00000615917 1407 ntTSL 2 BASIC16.96■□□□□ 0.31
LINC00242Q5T6M2 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
LINC00242Q5T6M2 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC16.96■□□□□ 0.31
LINC00242Q5T6M2 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
LINC00242Q5T6M2 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC16.95■□□□□ 0.3
LINC00242Q5T6M2 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
LINC00242Q5T6M2 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC16.95■□□□□ 0.3
LINC00242Q5T6M2 LINC00273-201ENST00000539813 1452 ntBASIC16.95■□□□□ 0.3
LINC00242Q5T6M2 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
LINC00242Q5T6M2 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
LINC00242Q5T6M2 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
LINC00242Q5T6M2 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC16.94■□□□□ 0.3
LINC00242Q5T6M2 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
LINC00242Q5T6M2 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
LINC00242Q5T6M2 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
LINC00242Q5T6M2 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
LINC00242Q5T6M2 AC108673.1-201ENST00000510422 1159 ntBASIC16.93■□□□□ 0.3
LINC00242Q5T6M2 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
LINC00242Q5T6M2 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
LINC00242Q5T6M2 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
LINC00242Q5T6M2 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
LINC00242Q5T6M2 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
LINC00242Q5T6M2 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC16.92■□□□□ 0.3
LINC00242Q5T6M2 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
LINC00242Q5T6M2 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
LINC00242Q5T6M2 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC16.91■□□□□ 0.3
LINC00242Q5T6M2 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC16.91■□□□□ 0.3
LINC00242Q5T6M2 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
LINC00242Q5T6M2 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
LINC00242Q5T6M2 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
LINC00242Q5T6M2 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
LINC00242Q5T6M2 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
LINC00242Q5T6M2 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LINC00242Q5T6M2 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LINC00242Q5T6M2 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
LINC00242Q5T6M2 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
LINC00242Q5T6M2 AC005559.1-201ENST00000589661 871 ntBASIC16.9■□□□□ 0.3
LINC00242Q5T6M2 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
LINC00242Q5T6M2 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
LINC00242Q5T6M2 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LINC00242Q5T6M2 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
LINC00242Q5T6M2 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
LINC00242Q5T6M2 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LINC00242Q5T6M2 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
LINC00242Q5T6M2 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LINC00242Q5T6M2 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC16.89■□□□□ 0.29
LINC00242Q5T6M2 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC16.89■□□□□ 0.29
LINC00242Q5T6M2 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC16.89■□□□□ 0.29
LINC00242Q5T6M2 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC16.89■□□□□ 0.29
LINC00242Q5T6M2 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
LINC00242Q5T6M2 SNAI3-AS1-204ENST00000567997 2048 ntBASIC16.89■□□□□ 0.29
LINC00242Q5T6M2 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LINC00242Q5T6M2 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
LINC00242Q5T6M2 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LINC00242Q5T6M2 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LINC00242Q5T6M2 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
LINC00242Q5T6M2 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LINC00242Q5T6M2 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC16.87■□□□□ 0.29
LINC00242Q5T6M2 AC093323.1-202ENST00000635031 2045 ntBASIC16.87■□□□□ 0.29
LINC00242Q5T6M2 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
LINC00242Q5T6M2 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC16.87■□□□□ 0.29
LINC00242Q5T6M2 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
LINC00242Q5T6M2 MIR6090-201ENST00000622481 60 ntBASIC16.87■□□□□ 0.29
LINC00242Q5T6M2 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
LINC00242Q5T6M2 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 70 ms